Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1797
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,125,487 | - | Pf6N2E2_1796 | 0.64 | +0.6 | |
2,125,895 | + | +0.2 | |||
2,125,962 | - | -0.3 | |||
2,126,086 | + | +0.4 | |||
2,126,087 | - | +0.7 | |||
2,126,087 | - | +0.3 | |||
2,126,133 | + | +0.7 | |||
2,126,134 | - | +0.6 | |||
2,126,134 | - | +0.7 | |||
2,126,141 | + | -0.5 | |||
2,126,157 | - | -0.3 | |||
2,126,284 | + | -0.7 | |||
2,126,285 | - | +0.8 | |||
2,126,382 | - | Pf6N2E2_1797 | 0.17 | -0.7 | |
2,126,619 | - | Pf6N2E2_1797 | 0.42 | +0.2 | |
2,126,627 | + | Pf6N2E2_1797 | 0.42 | -1.4 | |
2,126,902 | + | Pf6N2E2_1797 | 0.71 | -1.3 | |
2,127,191 | - | +0.0 | |||
2,127,639 | + | Pf6N2E2_1798 | 0.11 | +0.2 | |
2,127,752 | - | Pf6N2E2_1798 | 0.19 | -0.9 | |
2,128,030 | - | Pf6N2E2_1798 | 0.39 | -0.7 | |
2,128,030 | - | Pf6N2E2_1798 | 0.39 | +0.7 | |
2,128,054 | - | Pf6N2E2_1798 | 0.40 | +1.1 | |
2,128,054 | - | Pf6N2E2_1798 | 0.40 | +0.2 | |
2,128,057 | + | Pf6N2E2_1798 | 0.40 | -0.9 | |
2,128,057 | + | Pf6N2E2_1798 | 0.40 | +0.6 | |
2,128,057 | + | Pf6N2E2_1798 | 0.40 | -0.1 | |
2,128,057 | + | Pf6N2E2_1798 | 0.40 | +0.2 | |
2,128,057 | + | Pf6N2E2_1798 | 0.40 | +1.4 | |
2,128,058 | - | Pf6N2E2_1798 | 0.41 | +0.8 | |
2,128,058 | - | Pf6N2E2_1798 | 0.41 | +0.0 | |
2,128,058 | - | Pf6N2E2_1798 | 0.41 | +0.8 | |
2,128,058 | - | Pf6N2E2_1798 | 0.41 | -0.6 |
Or see this region's nucleotide sequence