Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06442 and H281DRAFT_06443 are separated by 143 nucleotides H281DRAFT_06443 and H281DRAFT_06444 are separated by 189 nucleotides
H281DRAFT_06442: H281DRAFT_06442 - cytochrome d ubiquinol oxidase subunit II, at 47,480 to 48,466
_06442
H281DRAFT_06443: H281DRAFT_06443 - molybdopterin molybdotransferase, at 48,610 to 49,824
_06443
H281DRAFT_06444: H281DRAFT_06444 - cyclic pyranopterin monophosphate synthase subunit MoaA, at 50,014 to 51,117
_06444
Position (kb) 48
49
50 Strain fitness (log2 ratio) -1
0
1
2
3 at 47.721 kb on - strand, within H281DRAFT_06442 at 47.744 kb on + strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.965 kb on - strand, within H281DRAFT_06442 at 48.064 kb on + strand at 48.210 kb on - strand, within H281DRAFT_06442 at 48.210 kb on - strand, within H281DRAFT_06442 at 48.305 kb on + strand at 48.542 kb on + strand at 48.592 kb on + strand at 49.004 kb on + strand, within H281DRAFT_06443 at 49.005 kb on - strand, within H281DRAFT_06443 at 49.009 kb on - strand, within H281DRAFT_06443 at 49.009 kb on - strand, within H281DRAFT_06443 at 49.009 kb on - strand, within H281DRAFT_06443 at 49.009 kb on - strand, within H281DRAFT_06443 at 49.009 kb on - strand, within H281DRAFT_06443 at 49.201 kb on + strand, within H281DRAFT_06443 at 49.912 kb on - strand at 49.912 kb on - strand at 49.916 kb on + strand at 49.917 kb on - strand at 49.925 kb on - strand at 50.160 kb on + strand, within H281DRAFT_06444 at 50.165 kb on - strand, within H281DRAFT_06444 at 50.165 kb on - strand, within H281DRAFT_06444 at 50.165 kb on - strand, within H281DRAFT_06444 at 50.197 kb on + strand at 50.198 kb on - strand, within H281DRAFT_06444
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 47,721 - H281DRAFT_06442 0.24 +0.1 47,744 + H281DRAFT_06442 0.27 -1.0 47,745 - H281DRAFT_06442 0.27 +2.4 47,745 - H281DRAFT_06442 0.27 +0.3 47,745 - H281DRAFT_06442 0.27 +0.8 47,965 - H281DRAFT_06442 0.49 -0.1 48,064 + +1.9 48,210 - H281DRAFT_06442 0.74 +0.0 48,210 - H281DRAFT_06442 0.74 -0.4 48,305 + +1.9 48,542 + +0.7 48,592 + +1.6 49,004 + H281DRAFT_06443 0.32 -0.8 49,005 - H281DRAFT_06443 0.33 -0.2 49,009 - H281DRAFT_06443 0.33 -0.4 49,009 - H281DRAFT_06443 0.33 +0.2 49,009 - H281DRAFT_06443 0.33 -0.7 49,009 - H281DRAFT_06443 0.33 -0.3 49,009 - H281DRAFT_06443 0.33 -0.5 49,201 + H281DRAFT_06443 0.49 +0.3 49,912 - -0.2 49,912 - -0.4 49,916 + +0.0 49,917 - -0.8 49,925 - -0.6 50,160 + H281DRAFT_06444 0.13 +0.7 50,165 - H281DRAFT_06444 0.14 +0.6 50,165 - H281DRAFT_06444 0.14 -0.8 50,165 - H281DRAFT_06444 0.14 -0.8 50,197 + +3.5 50,198 - H281DRAFT_06444 0.17 -0.9
Or see this region's nucleotide sequence