Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05859

Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
137,283	+		H281DRAFT_05858	0.51	+0.7
137,293	-		H281DRAFT_05858	0.52	+0.5
137,386	-		H281DRAFT_05858	0.61	+0.6
137,386	-		H281DRAFT_05858	0.61	+0.2
137,404	-		H281DRAFT_05858	0.63	-0.5
137,404	-		H281DRAFT_05858	0.63	-2.4
137,474	-		H281DRAFT_05858	0.70	-0.5
137,475	+		H281DRAFT_05858	0.70	+1.5
137,476	-		H281DRAFT_05858	0.70	-1.4
137,476	-		H281DRAFT_05858	0.70	-0.2
137,477	+		H281DRAFT_05858	0.70	-1.0
137,477	+		H281DRAFT_05858	0.70	-1.0
137,477	+		H281DRAFT_05858	0.70	-1.2
137,478	-		H281DRAFT_05858	0.70	-0.2
137,478	-		H281DRAFT_05858	0.70	-0.7
137,478	-		H281DRAFT_05858	0.70	+1.2
137,478	-		H281DRAFT_05858	0.70	-2.9
137,478	-		H281DRAFT_05858	0.70	-1.0
137,478	-		H281DRAFT_05858	0.70	+0.1
137,478	-		H281DRAFT_05858	0.70	-0.7
137,753	-				+2.7
137,770	-				-0.4
137,770	-				+0.9
137,880	+				+0.2
137,929	+				-0.8
137,934	+				-1.0
137,935	-				-0.9
137,936	+				-0.6
137,936	+				-0.2
137,991	+				+0.6
137,991	+				+0.8
137,991	+				-0.6
137,991	+				-0.3
137,991	+				+0.2
137,991	+				+1.0
137,991	+				+0.5
137,991	+				-0.6
137,992	-				-0.1
137,992	-				+0.0
138,101	+				+1.2
138,102	-				-1.7
138,102	-				-2.0
138,158	+		H281DRAFT_05859	0.11	+0.7
138,158	+		H281DRAFT_05859	0.11	+1.7
138,158	+		H281DRAFT_05859	0.11	-0.3
138,158	+		H281DRAFT_05859	0.11	+0.1
138,158	+		H281DRAFT_05859	0.11	+1.1
138,158	+		H281DRAFT_05859	0.11	-0.4
138,158	+		H281DRAFT_05859	0.11	-0.8
138,158	+		H281DRAFT_05859	0.11	+0.2
138,158	+		H281DRAFT_05859	0.11	-0.3
138,158	+		H281DRAFT_05859	0.11	-0.8
138,159	-		H281DRAFT_05859	0.11	-0.5
138,159	-		H281DRAFT_05859	0.11	-0.6
138,159	-		H281DRAFT_05859	0.11	+0.2
138,159	-		H281DRAFT_05859	0.11	+0.2
138,159	-		H281DRAFT_05859	0.11	-0.8
138,159	-		H281DRAFT_05859	0.11	-0.1
138,159	-		H281DRAFT_05859	0.11	+0.5
138,159	-		H281DRAFT_05859	0.11	+0.2
138,159	-		H281DRAFT_05859	0.11	+0.1
138,160	+		H281DRAFT_05859	0.11	+0.1
138,160	+		H281DRAFT_05859	0.11	-0.5
138,160	+		H281DRAFT_05859	0.11	+0.2
138,160	+		H281DRAFT_05859	0.11	+0.4
138,161	-		H281DRAFT_05859	0.11	-0.7
138,161	-		H281DRAFT_05859	0.11	+1.9
138,161	-		H281DRAFT_05859	0.11	-0.4
138,162	+		H281DRAFT_05859	0.11	+0.6
138,162	+		H281DRAFT_05859	0.11	+0.6
138,162	+		H281DRAFT_05859	0.11	-0.8
138,162	+		H281DRAFT_05859	0.11	+0.6
138,163	-		H281DRAFT_05859	0.11	+0.9
138,163	-		H281DRAFT_05859	0.11	+1.2
138,163	-		H281DRAFT_05859	0.11	+0.3
138,163	-		H281DRAFT_05859	0.11	-0.4
138,163	-		H281DRAFT_05859	0.11	+0.1
138,249	-		H281DRAFT_05859	0.16	+0.2
138,249	-		H281DRAFT_05859	0.16	-0.2
138,249	-		H281DRAFT_05859	0.16	-0.7
138,503	+		H281DRAFT_05859	0.32	+1.0
138,503	+		H281DRAFT_05859	0.32	+0.3
138,504	-		H281DRAFT_05859	0.32	-0.1
138,504	-		H281DRAFT_05859	0.32	+0.2
138,504	-		H281DRAFT_05859	0.32	+0.1
138,531	-		H281DRAFT_05859	0.33	-1.0
138,585	+		H281DRAFT_05859	0.37	-0.9
138,585	+		H281DRAFT_05859	0.37	+0.2
138,585	+		H281DRAFT_05859	0.37	+0.4
138,585	+		H281DRAFT_05859	0.37	+1.2
138,585	+		H281DRAFT_05859	0.37	-0.9
138,585	+		H281DRAFT_05859	0.37	+0.2
138,585	+		H281DRAFT_05859	0.37	-0.8
138,585	+		H281DRAFT_05859	0.37	-1.0
138,585	+		H281DRAFT_05859	0.37	-0.8
138,585	+		H281DRAFT_05859	0.37	-0.2
138,586	-		H281DRAFT_05859	0.37	+1.4
138,586	-		H281DRAFT_05859	0.37	+0.5
138,586	-		H281DRAFT_05859	0.37	-0.1
138,586	-		H281DRAFT_05859	0.37	+1.2
138,586	-		H281DRAFT_05859	0.37	-0.7
138,587	+		H281DRAFT_05859	0.37	-0.7
138,587	+		H281DRAFT_05859	0.37	-0.3
138,587	+		H281DRAFT_05859	0.37	-1.3
138,587	+		H281DRAFT_05859	0.37	+0.6
138,588	-		H281DRAFT_05859	0.37	+1.0
138,588	-		H281DRAFT_05859	0.37	+0.4
138,833	+		H281DRAFT_05859	0.52	-1.9
138,833	+		H281DRAFT_05859	0.52	+0.4
138,833	+		H281DRAFT_05859	0.52	+0.0
138,833	+		H281DRAFT_05859	0.52	-0.9
138,834	-		H281DRAFT_05859	0.52	+0.4
138,834	-		H281DRAFT_05859	0.52	-0.2
138,835	+		H281DRAFT_05859	0.52	+0.1
138,835	+		H281DRAFT_05859	0.52	-0.7
138,836	-		H281DRAFT_05859	0.52	+0.9
138,837	+		H281DRAFT_05859	0.52	+1.2
138,837	+		H281DRAFT_05859	0.52	-0.5
138,837	+		H281DRAFT_05859	0.52	+0.2
138,838	-		H281DRAFT_05859	0.52	-0.3
138,838	-		H281DRAFT_05859	0.52	-0.8
138,838	-		H281DRAFT_05859	0.52	-0.3
138,838	-				+1.2
138,838	-		H281DRAFT_05859	0.52	-0.5
138,838	-		H281DRAFT_05859	0.52	+0.2
138,838	-		H281DRAFT_05859	0.52	-0.2
138,948	-		H281DRAFT_05859	0.59	+0.3
138,987	-		H281DRAFT_05859	0.62	-1.6
138,987	-		H281DRAFT_05859	0.62	+0.8
138,987	-		H281DRAFT_05859	0.62	+0.2
139,071	-		H281DRAFT_05859	0.67	+0.6
139,071	-		H281DRAFT_05859	0.67	+0.5
139,117	+		H281DRAFT_05859	0.69	-1.3
139,117	+		H281DRAFT_05859	0.69	-3.2
139,118	-		H281DRAFT_05859	0.70	-0.8
139,118	-		H281DRAFT_05859	0.70	-1.2
139,118	-		H281DRAFT_05859	0.70	-1.0
139,130	+		H281DRAFT_05859	0.70	-0.3
139,208	+		H281DRAFT_05859	0.75	+1.4
139,208	+		H281DRAFT_05859	0.75	+1.6
139,209	-		H281DRAFT_05859	0.75	-0.2
139,209	-		H281DRAFT_05859	0.75	-0.1
139,209	-		H281DRAFT_05859	0.75	-0.0
139,209	-		H281DRAFT_05859	0.75	-0.0
139,286	+		H281DRAFT_05859	0.80	-0.6
139,286	+		H281DRAFT_05859	0.80	+1.2
139,286	+		H281DRAFT_05859	0.80	+0.2
139,286	+		H281DRAFT_05859	0.80	-0.3
139,287	-		H281DRAFT_05859	0.80	-1.1
139,287	-		H281DRAFT_05859	0.80	-1.4
139,288	+		H281DRAFT_05859	0.80	-1.1
139,288	+		H281DRAFT_05859	0.80	+1.6
139,288	+		H281DRAFT_05859	0.80	-0.4
139,288	+		H281DRAFT_05859	0.80	-0.4
139,299	+		H281DRAFT_05859	0.81	+0.6
139,299	+		H281DRAFT_05859	0.81	-0.5
139,299	+		H281DRAFT_05859	0.81	+0.2
139,300	-		H281DRAFT_05859	0.81	-0.3
139,300	-		H281DRAFT_05859	0.81	-1.5
139,300	-		H281DRAFT_05859	0.81	-0.3
139,300	-		H281DRAFT_05859	0.81	-1.3
139,334	+		H281DRAFT_05859	0.83	-0.0
139,334	+		H281DRAFT_05859	0.83	-0.3
139,334	+		H281DRAFT_05859	0.83	+0.4
139,335	-		H281DRAFT_05859	0.83	+0.5
139,335	-		H281DRAFT_05859	0.83	+0.9
139,335	-		H281DRAFT_05859	0.83	-1.5
139,335	-		H281DRAFT_05859	0.83	+1.6
139,335	-		H281DRAFT_05859	0.83	+0.2
139,469	+				-1.4
139,469	+				-1.1
139,470	-				-0.5
139,470	-				-0.2
139,535	+				+0.3
139,535	+				+0.4
139,610	+				-0.4
139,610	+				-0.9
139,611	-				-0.6
139,611	-				-0.6
140,001	-		H281DRAFT_05860	0.20	+0.1
140,005	+		H281DRAFT_05860	0.20	+0.4
140,118	+		H281DRAFT_05860	0.29	-1.2
140,180	+		H281DRAFT_05860	0.34	-0.3
140,181	-		H281DRAFT_05860	0.34	+0.8
140,252	+		H281DRAFT_05860	0.40	+0.4
140,252	+		H281DRAFT_05860	0.40	+2.2
140,252	+		H281DRAFT_05860	0.40	+0.7
140,252	+		H281DRAFT_05860	0.40	-0.3
140,252	+		H281DRAFT_05860	0.40	-2.6
140,252	+		H281DRAFT_05860	0.40	+0.1
140,253	-		H281DRAFT_05860	0.40	-2.9
140,253	-		H281DRAFT_05860	0.40	+2.0
140,321	+		H281DRAFT_05860	0.45	-0.4
140,321	+		H281DRAFT_05860	0.45	-0.6
140,321	+		H281DRAFT_05860	0.45	-0.2
140,321	+		H281DRAFT_05860	0.45	-0.4
140,321	+		H281DRAFT_05860	0.45	+0.4
140,321	+		H281DRAFT_05860	0.45	-1.1
140,321	+		H281DRAFT_05860	0.45	-1.5
140,321	+		H281DRAFT_05860	0.45	-0.6
140,322	-		H281DRAFT_05860	0.45	+0.3
140,322	-		H281DRAFT_05860	0.45	-0.0
140,322	-		H281DRAFT_05860	0.45	+0.6
140,322	-		H281DRAFT_05860	0.45	-0.5
140,325	+		H281DRAFT_05860	0.45	-0.4
140,325	+		H281DRAFT_05860	0.45	-0.5
140,325	+		H281DRAFT_05860	0.45	+0.3
140,325	+		H281DRAFT_05860	0.45	-0.2
140,325	+		H281DRAFT_05860	0.45	+0.3
140,325	+		H281DRAFT_05860	0.45	+0.2
140,325	+		H281DRAFT_05860	0.45	-0.9
140,325	+		H281DRAFT_05860	0.45	+1.2
140,326	-		H281DRAFT_05860	0.45	+0.0
140,326	-		H281DRAFT_05860	0.45	+0.7
140,326	-		H281DRAFT_05860	0.45	-0.1
140,326	-		H281DRAFT_05860	0.45	-0.1
140,326	-		H281DRAFT_05860	0.45	-2.3
140,326	-		H281DRAFT_05860	0.45	+0.7
140,326	-		H281DRAFT_05860	0.45	+0.8
140,494	+		H281DRAFT_05860	0.59	-0.2
140,494	+		H281DRAFT_05860	0.59	-0.7
140,494	+		H281DRAFT_05860	0.59	-0.0
140,540	+		H281DRAFT_05860	0.62	-0.8
140,540	+		H281DRAFT_05860	0.62	-0.1
140,541	-		H281DRAFT_05860	0.62	-0.4
140,541	-		H281DRAFT_05860	0.62	+0.1
140,541	-		H281DRAFT_05860	0.62	+0.5
140,541	-		H281DRAFT_05860	0.62	+0.4
140,541	-		H281DRAFT_05860	0.62	-1.4