Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02797 and H281DRAFT_02798 are separated by 576 nucleotides H281DRAFT_02798 and H281DRAFT_02799 are separated by 92 nucleotides H281DRAFT_02799 and H281DRAFT_02800 are separated by 49 nucleotides
H281DRAFT_02797: H281DRAFT_02797 - xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 384,068 to 386,461
_02797
H281DRAFT_02798: H281DRAFT_02798 - hypothetical protein, at 387,038 to 387,574
_02798
H281DRAFT_02799: H281DRAFT_02799 - FMN phosphatase YigB, HAD superfamily, at 387,667 to 388,368
_02799
H281DRAFT_02800: H281DRAFT_02800 - 6-phosphogluconate dehydrogenase (decarboxylating), at 388,418 to 389,455
_02800
Position (kb) 387
388 Strain fitness (log2 ratio) -2
-1
0
1
2 at 386.136 kb on + strand, within H281DRAFT_02797 at 386.151 kb on + strand, within H281DRAFT_02797 at 386.349 kb on + strand at 386.349 kb on + strand at 386.350 kb on - strand at 386.350 kb on - strand at 386.350 kb on - strand at 386.370 kb on + strand at 386.370 kb on + strand at 386.371 kb on - strand at 386.421 kb on - strand at 386.578 kb on - strand at 386.738 kb on - strand at 386.818 kb on + strand at 386.818 kb on + strand at 386.819 kb on - strand at 386.819 kb on - strand at 386.983 kb on + strand at 386.983 kb on + strand at 386.984 kb on - strand at 386.984 kb on - strand at 387.227 kb on + strand, within H281DRAFT_02798 at 387.668 kb on + strand at 387.669 kb on - strand at 387.669 kb on - strand at 387.669 kb on - strand at 387.868 kb on + strand, within H281DRAFT_02799 at 387.868 kb on + strand, within H281DRAFT_02799 at 387.872 kb on + strand, within H281DRAFT_02799 at 387.872 kb on + strand, within H281DRAFT_02799 at 387.873 kb on - strand, within H281DRAFT_02799 at 387.873 kb on - strand, within H281DRAFT_02799 at 387.929 kb on + strand, within H281DRAFT_02799 at 387.929 kb on + strand, within H281DRAFT_02799 at 387.929 kb on + strand, within H281DRAFT_02799 at 388.324 kb on + strand at 388.324 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 386,136 + H281DRAFT_02797 0.86 -0.4 386,151 + H281DRAFT_02797 0.87 +0.4 386,349 + +0.4 386,349 + -2.4 386,350 - +0.9 386,350 - +0.4 386,350 - +0.7 386,370 + +1.0 386,370 + +2.6 386,371 - -0.8 386,421 - -0.4 386,578 - +0.6 386,738 - -0.6 386,818 + -0.2 386,818 + +0.4 386,819 - +0.6 386,819 - +0.3 386,983 + -0.3 386,983 + +0.1 386,984 - -0.5 386,984 - -1.3 387,227 + H281DRAFT_02798 0.35 +1.2 387,668 + -0.3 387,669 - -0.7 387,669 - -0.2 387,669 - +1.1 387,868 + H281DRAFT_02799 0.29 -0.3 387,868 + H281DRAFT_02799 0.29 +1.9 387,872 + H281DRAFT_02799 0.29 +0.2 387,872 + H281DRAFT_02799 0.29 +0.6 387,873 - H281DRAFT_02799 0.29 +1.4 387,873 - H281DRAFT_02799 0.29 -0.7 387,929 + H281DRAFT_02799 0.37 +1.0 387,929 + H281DRAFT_02799 0.37 +0.9 387,929 + H281DRAFT_02799 0.37 -0.7 388,324 + -0.3 388,324 + -0.9
Or see this region's nucleotide sequence