Experiment: LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02776 and H281DRAFT_02777 are separated by 48 nucleotides H281DRAFT_02777 and H281DRAFT_02778 are separated by 249 nucleotides
H281DRAFT_02776: H281DRAFT_02776 - maltose alpha-D-glucosyltransferase/ alpha-amylase, at 365,717 to 367,381
_02776
H281DRAFT_02777: H281DRAFT_02777 - alpha-glucosidase, at 367,430 to 369,004
_02777
H281DRAFT_02778: H281DRAFT_02778 - two-component system, NtrC family, sensor kinase, at 369,254 to 370,672
_02778
Position (kb) 367
368
369
370 Strain fitness (log2 ratio) -1
0
1
2 at 366.556 kb on - strand, within H281DRAFT_02776 at 366.720 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.003 kb on - strand, within H281DRAFT_02776 at 367.155 kb on + strand, within H281DRAFT_02776 at 367.156 kb on - strand, within H281DRAFT_02776 at 367.174 kb on - strand, within H281DRAFT_02776 at 367.467 kb on - strand at 367.592 kb on + strand, within H281DRAFT_02777 at 367.908 kb on - strand, within H281DRAFT_02777 at 368.091 kb on - strand, within H281DRAFT_02777 at 368.132 kb on + strand, within H281DRAFT_02777 at 368.133 kb on - strand, within H281DRAFT_02777 at 368.496 kb on - strand, within H281DRAFT_02777 at 368.683 kb on + strand, within H281DRAFT_02777 at 369.480 kb on - strand, within H281DRAFT_02778
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x remove 366,556 - H281DRAFT_02776 0.50 -0.9 366,720 + H281DRAFT_02776 0.60 +1.8 367,002 + H281DRAFT_02776 0.77 +0.7 367,002 + H281DRAFT_02776 0.77 +0.1 367,002 + H281DRAFT_02776 0.77 +0.4 367,003 - H281DRAFT_02776 0.77 -0.1 367,155 + H281DRAFT_02776 0.86 +0.1 367,156 - H281DRAFT_02776 0.86 +2.7 367,174 - H281DRAFT_02776 0.88 -1.1 367,467 - +1.5 367,592 + H281DRAFT_02777 0.10 +0.2 367,908 - H281DRAFT_02777 0.30 +0.4 368,091 - H281DRAFT_02777 0.42 +0.2 368,132 + H281DRAFT_02777 0.45 +0.2 368,133 - H281DRAFT_02777 0.45 -0.5 368,496 - H281DRAFT_02777 0.68 +1.4 368,683 + H281DRAFT_02777 0.80 +0.2 369,480 - H281DRAFT_02778 0.16 +0.0
Or see this region's nucleotide sequence