Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3779

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,878,154	+		Ga0059261_3778	0.40	+0.5
3,878,154	+		Ga0059261_3778	0.40	+0.2
3,878,154	+		Ga0059261_3778	0.40	-0.1
3,878,155	-		Ga0059261_3778	0.40	-0.2
3,878,155	-		Ga0059261_3778	0.40	+0.3
3,878,163	+		Ga0059261_3778	0.41	-0.4
3,878,163	+		Ga0059261_3778	0.41	-0.1
3,878,163	+		Ga0059261_3778	0.41	+0.6
3,878,164	-		Ga0059261_3778	0.41	-0.3
3,878,164	-		Ga0059261_3778	0.41	-0.0
3,878,164	-		Ga0059261_3778	0.41	+0.5
3,878,164	-		Ga0059261_3778	0.41	+0.3
3,878,164	-		Ga0059261_3778	0.41	-0.3
3,878,494	+				+0.1
3,878,494	+				-0.5
3,878,494	+				-0.7
3,878,494	+				+0.6
3,878,494	+				+0.4
3,878,494	+				+0.1
3,878,494	+				+0.5
3,878,494	+				+0.6
3,878,495	-				-0.2
3,878,495	-				-0.3
3,878,495	-				+0.9
3,878,495	-				+0.7
3,878,495	-				+0.1
3,878,495	-				-0.3
3,878,495	-				+0.8
3,878,513	+				-0.1
3,878,587	+				+0.4
3,878,637	+				+0.6
3,878,683	+				-0.2
3,878,683	+				-0.1
3,878,683	+				-0.3
3,878,683	+				-0.3
3,878,723	+				+0.4
3,878,724	-				-0.1
3,878,768	+				+0.5
3,878,769	-				-0.3
3,878,769	-				+0.3
3,878,785	+				+2.9
3,878,785	+				+0.7
3,878,785	+				+0.4
3,878,786	-				+0.4
3,878,788	+				+0.2
3,878,788	+				+1.6
3,878,788	+				+0.0
3,878,788	+				+0.5
3,878,789	-				+1.5
3,878,789	-				+1.4
3,878,880	-				-0.9
3,878,923	+				-0.1
3,878,924	-				-1.2
3,878,924	-				+0.3
3,878,924	-				+0.2
3,878,929	+				+0.2
3,878,929	+				-0.7
3,878,929	+				-0.2
3,878,929	+				+0.1
3,878,929	+				-1.3
3,878,930	-				+0.2
3,878,930	-				-0.1
3,878,930	-				+0.1
3,879,130	-				-0.4
3,879,194	+				-2.0
3,879,259	+				-0.4
3,879,260	-				-1.3
3,879,260	-				-0.1
3,879,260	-				-0.5
3,879,260	-				-0.2
3,879,260	-				-0.7
3,879,260	-				+0.3
3,879,448	+		Ga0059261_3779	0.14	-0.9
3,879,448	+		Ga0059261_3779	0.14	-0.4
3,879,449	-		Ga0059261_3779	0.14	-0.8
3,879,449	-		Ga0059261_3779	0.14	-0.5
3,879,490	+		Ga0059261_3779	0.16	-0.7
3,879,491	-		Ga0059261_3779	0.16	-1.5
3,879,503	-		Ga0059261_3779	0.17	-0.8
3,879,503	-		Ga0059261_3779	0.17	-1.5
3,879,503	-		Ga0059261_3779	0.17	+0.2
3,879,503	-		Ga0059261_3779	0.17	-0.4
3,879,503	-		Ga0059261_3779	0.17	-0.9
3,879,503	-		Ga0059261_3779	0.17	-0.4
3,879,505	+		Ga0059261_3779	0.17	-0.1
3,879,505	+		Ga0059261_3779	0.17	-0.1
3,879,505	+		Ga0059261_3779	0.17	-1.1
3,879,511	+		Ga0059261_3779	0.17	-0.7
3,879,511	+		Ga0059261_3779	0.17	-0.0
3,879,511	+		Ga0059261_3779	0.17	-0.5
3,879,511	+		Ga0059261_3779	0.17	-0.3
3,879,512	-		Ga0059261_3779	0.17	+0.2
3,879,512	-		Ga0059261_3779	0.17	+0.9
3,879,529	+		Ga0059261_3779	0.18	-0.8
3,879,530	-		Ga0059261_3779	0.18	-0.7
3,879,530	-		Ga0059261_3779	0.18	-2.0
3,879,530	-		Ga0059261_3779	0.18	-0.4
3,879,530	-		Ga0059261_3779	0.18	-1.0
3,879,530	-		Ga0059261_3779	0.18	-2.5
3,879,530	-		Ga0059261_3779	0.18	-1.3
3,879,530	-		Ga0059261_3779	0.18	-2.2
3,879,550	+		Ga0059261_3779	0.19	-0.9
3,879,550	+		Ga0059261_3779	0.19	-1.3
3,879,550	+		Ga0059261_3779	0.19	-0.7
3,879,550	+		Ga0059261_3779	0.19	-1.9
3,879,550	+		Ga0059261_3779	0.19	+0.3
3,879,550	+		Ga0059261_3779	0.19	-0.1
3,879,551	-		Ga0059261_3779	0.19	-0.8
3,879,551	-		Ga0059261_3779	0.19	+0.0
3,879,551	-		Ga0059261_3779	0.19	-0.2
3,879,551	-		Ga0059261_3779	0.19	+0.1
3,879,664	+		Ga0059261_3779	0.24	-0.0
3,879,665	-		Ga0059261_3779	0.24	-1.6
3,879,688	+		Ga0059261_3779	0.25	-0.0
3,879,689	-		Ga0059261_3779	0.25	-1.0
3,879,689	-		Ga0059261_3779	0.25	+0.3
3,879,769	+				-0.0
3,879,769	+		Ga0059261_3779	0.29	-1.0
3,879,770	-		Ga0059261_3779	0.29	-1.0
3,879,847	+		Ga0059261_3779	0.32	-2.5
3,879,847	+				+0.3
3,879,847	+		Ga0059261_3779	0.32	+1.3
3,879,848	-		Ga0059261_3779	0.32	-0.3
3,879,848	-		Ga0059261_3779	0.32	-0.8
3,879,901	-		Ga0059261_3779	0.35	+0.3
3,879,959	-		Ga0059261_3779	0.37	-0.9
3,880,153	+		Ga0059261_3779	0.46	-0.3
3,880,153	+				-0.0
3,880,153	+		Ga0059261_3779	0.46	-0.8
3,880,153	+		Ga0059261_3779	0.46	-0.7
3,880,210	+		Ga0059261_3779	0.49	-0.5
3,880,211	-		Ga0059261_3779	0.49	-2.1
3,880,211	-		Ga0059261_3779	0.49	-0.9
3,880,211	-				+2.3
3,880,211	-		Ga0059261_3779	0.49	-0.2
3,880,211	-		Ga0059261_3779	0.49	-0.1
3,880,211	-		Ga0059261_3779	0.49	-1.3
3,880,318	+		Ga0059261_3779	0.54	-1.4
3,880,318	+		Ga0059261_3779	0.54	-0.7
3,880,397	+		Ga0059261_3779	0.57	-1.0
3,880,397	+		Ga0059261_3779	0.57	+0.6
3,880,398	-		Ga0059261_3779	0.57	-0.4
3,880,398	-		Ga0059261_3779	0.57	-0.4
3,880,568	-		Ga0059261_3779	0.65	-1.2
3,880,621	+		Ga0059261_3779	0.68	-2.0
3,880,621	+		Ga0059261_3779	0.68	-0.2
3,880,621	+		Ga0059261_3779	0.68	-0.6
3,880,621	+		Ga0059261_3779	0.68	-1.9
3,880,621	+		Ga0059261_3779	0.68	-1.0
3,880,621	+		Ga0059261_3779	0.68	-0.7
3,880,622	-		Ga0059261_3779	0.68	-0.3
3,880,622	-		Ga0059261_3779	0.68	-0.6
3,880,623	+		Ga0059261_3779	0.68	-0.1
3,880,623	+		Ga0059261_3779	0.68	-1.3
3,880,623	+		Ga0059261_3779	0.68	-1.0
3,880,623	+		Ga0059261_3779	0.68	-0.6
3,880,623	+		Ga0059261_3779	0.68	-0.7
3,880,624	-		Ga0059261_3779	0.68	+0.1
3,880,624	-		Ga0059261_3779	0.68	-0.3
3,880,624	-		Ga0059261_3779	0.68	-1.1
3,880,624	-		Ga0059261_3779	0.68	-1.0
3,880,651	+		Ga0059261_3779	0.69	-1.5
3,880,652	-		Ga0059261_3779	0.69	-0.7
3,880,652	-		Ga0059261_3779	0.69	-2.3
3,880,652	-		Ga0059261_3779	0.69	+0.0
3,880,652	-		Ga0059261_3779	0.69	-0.6
3,880,683	+		Ga0059261_3779	0.71	-0.8
3,880,684	-		Ga0059261_3779	0.71	-1.1
3,880,717	+		Ga0059261_3779	0.72	-1.8
3,880,718	-		Ga0059261_3779	0.72	+0.5
3,880,718	-		Ga0059261_3779	0.72	+0.3
3,880,718	-		Ga0059261_3779	0.72	-1.2
3,880,718	-		Ga0059261_3779	0.72	-2.0
3,880,761	+		Ga0059261_3779	0.74	-0.7
3,880,761	+		Ga0059261_3779	0.74	-0.4
3,880,761	+		Ga0059261_3779	0.74	-0.6
3,880,762	-		Ga0059261_3779	0.74	+0.3
3,880,885	+				-0.0
3,880,886	-		Ga0059261_3779	0.80	-1.1
3,880,886	-		Ga0059261_3779	0.80	-1.8
3,880,886	-		Ga0059261_3779	0.80	-0.6
3,880,886	-		Ga0059261_3779	0.80	-0.5
3,880,960	+		Ga0059261_3779	0.83	+0.7
3,880,960	+		Ga0059261_3779	0.83	-1.1
3,880,961	-		Ga0059261_3779	0.83	-0.0
3,880,961	-		Ga0059261_3779	0.83	-0.6
3,880,961	-		Ga0059261_3779	0.83	+0.7
3,880,961	-		Ga0059261_3779	0.83	-1.2
3,880,962	+		Ga0059261_3779	0.83	-1.3
3,880,962	+		Ga0059261_3779	0.83	-1.3
3,880,963	-		Ga0059261_3779	0.83	+0.6
3,881,101	+		Ga0059261_3779	0.90	+1.2
3,881,102	-		Ga0059261_3779	0.90	-1.3
3,881,102	-		Ga0059261_3779	0.90	+0.1
3,881,102	-		Ga0059261_3779	0.90	+1.4
3,881,102	-		Ga0059261_3779	0.90	+0.3
3,881,103	+		Ga0059261_3779	0.90	+0.0
3,881,104	-		Ga0059261_3779	0.90	+0.4
3,881,283	+				+0.1
3,881,283	+				+0.1
3,881,283	+				-0.9
3,881,283	+				-0.7
3,881,283	+				+0.3
3,881,283	+				+0.9
3,881,283	+				+0.7
3,881,284	-				-0.6
3,881,284	-				-0.6
3,881,284	-				+0.4
3,881,368	+				+0.1
3,881,368	+				+0.5
3,881,378	+				-0.4
3,881,379	-				-0.0
3,881,379	-				-0.2
3,881,379	-				-0.2
3,881,562	+		Ga0059261_3780	0.40	+1.0
3,881,562	+		Ga0059261_3780	0.40	+0.2
3,881,562	+		Ga0059261_3780	0.40	-0.4
3,881,563	-		Ga0059261_3780	0.40	-0.3
3,881,621	+		Ga0059261_3780	0.51	-0.4
3,881,622	-		Ga0059261_3780	0.51	+0.4
3,881,622	-		Ga0059261_3780	0.51	+0.1
3,881,796	+		Ga0059261_3780	0.82	+0.3
3,881,796	+		Ga0059261_3780	0.82	-0.6
3,881,796	+		Ga0059261_3780	0.82	-0.0
3,881,797	-		Ga0059261_3780	0.82	-0.9
3,881,797	-		Ga0059261_3780	0.82	+0.6
3,881,981	+				-1.7
3,881,981	+				-0.6
3,881,982	-				-0.5
3,881,994	+				-1.8
3,882,004	+				-0.2
3,882,004	+				-1.4
3,882,005	-				-0.9
3,882,005	-				-1.0
3,882,005	-				-1.3
3,882,005	-				-0.2
3,882,082	+				-0.7
3,882,136	-				-0.3
3,882,273	+				+0.1
3,882,278	+				-0.6
3,882,279	-				+0.1
3,882,294	-				-0.2