Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3268

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,401,112	+		Ga0059261_3266	0.73	+0.1
3,401,112	+		Ga0059261_3266	0.73	+1.8
3,401,112	+		Ga0059261_3266	0.73	+0.2
3,401,112	+		Ga0059261_3266	0.73	+0.5
3,401,113	-		Ga0059261_3266	0.73	+0.5
3,401,115	+		Ga0059261_3266	0.73	+0.4
3,401,116	-		Ga0059261_3266	0.73	+0.3
3,401,160	+		Ga0059261_3266	0.75	-0.4
3,401,160	+		Ga0059261_3266	0.75	-0.1
3,401,160	+		Ga0059261_3266	0.75	-0.4
3,401,160	+		Ga0059261_3266	0.75	+0.0
3,401,160	+		Ga0059261_3266	0.75	+1.7
3,401,160	+		Ga0059261_3266	0.75	-0.3
3,401,160	+		Ga0059261_3266	0.75	-0.0
3,401,160	+		Ga0059261_3266	0.75	-0.6
3,401,160	+		Ga0059261_3266	0.75	-0.5
3,401,160	+		Ga0059261_3266	0.75	+0.4
3,401,161	-		Ga0059261_3266	0.75	-1.2
3,401,161	-		Ga0059261_3266	0.75	+0.4
3,401,161	-		Ga0059261_3266	0.75	-2.2
3,401,161	-		Ga0059261_3266	0.75	+0.3
3,401,190	+		Ga0059261_3266	0.76	+0.1
3,401,191	-		Ga0059261_3266	0.76	+0.5
3,401,191	-		Ga0059261_3266	0.76	-0.1
3,401,346	+		Ga0059261_3266	0.83	+0.8
3,401,346	+		Ga0059261_3266	0.83	+0.5
3,401,346	+		Ga0059261_3266	0.83	+0.1
3,401,347	-		Ga0059261_3266	0.83	+0.1
3,401,347	-		Ga0059261_3266	0.83	+0.1
3,401,347	-		Ga0059261_3266	0.83	+1.0
3,401,347	-		Ga0059261_3266	0.83	-0.4
3,401,358	+		Ga0059261_3266	0.83	+0.2
3,401,358	+		Ga0059261_3266	0.83	+0.2
3,401,358	+				+2.5
3,401,487	+		Ga0059261_3266	0.89	+1.0
3,401,487	+		Ga0059261_3266	0.89	-0.1
3,401,488	-		Ga0059261_3266	0.89	+0.5
3,401,488	-		Ga0059261_3266	0.89	+0.2
3,401,497	-		Ga0059261_3266	0.89	+0.1
3,401,570	-				+1.0
3,401,739	+				-0.2
3,401,753	+				-0.6
3,401,753	+				+0.1
3,401,753	+				-0.6
3,401,753	+				-0.2
3,401,844	+		Ga0059261_3267	0.29	-0.1
3,401,845	-		Ga0059261_3267	0.29	+0.0
3,401,849	+		Ga0059261_3267	0.31	+0.4
3,401,849	+		Ga0059261_3267	0.31	-0.4
3,401,850	-		Ga0059261_3267	0.31	-0.6
3,401,859	+		Ga0059261_3267	0.34	-2.6
3,401,859	+		Ga0059261_3267	0.34	+0.5
3,401,859	+		Ga0059261_3267	0.34	+0.2
3,401,859	+		Ga0059261_3267	0.34	+0.5
3,401,859	+		Ga0059261_3267	0.34	-0.4
3,401,859	+		Ga0059261_3267	0.34	-0.2
3,401,859	+		Ga0059261_3267	0.34	-0.3
3,401,859	+		Ga0059261_3267	0.34	-1.0
3,401,859	+		Ga0059261_3267	0.34	+0.1
3,401,859	+		Ga0059261_3267	0.34	-0.4
3,401,859	+		Ga0059261_3267	0.34	-0.2
3,401,860	-		Ga0059261_3267	0.34	+0.0
3,401,860	-		Ga0059261_3267	0.34	-0.2
3,401,862	-		Ga0059261_3267	0.35	+0.3
3,401,937	+		Ga0059261_3267	0.59	-0.0
3,401,937	+		Ga0059261_3267	0.59	-0.2
3,401,938	-		Ga0059261_3267	0.60	+0.9
3,401,938	-		Ga0059261_3267	0.60	-0.2
3,401,938	-		Ga0059261_3267	0.60	+0.7
3,401,938	-		Ga0059261_3267	0.60	-0.3
3,401,938	-		Ga0059261_3267	0.60	+0.8
3,401,938	-		Ga0059261_3267	0.60	-0.9
3,401,938	-		Ga0059261_3267	0.60	+0.3
3,401,938	-		Ga0059261_3267	0.60	+0.2
3,401,938	-		Ga0059261_3267	0.60	-0.8
3,401,941	-		Ga0059261_3267	0.61	+0.5
3,401,941	-		Ga0059261_3267	0.61	-0.1
3,401,961	+		Ga0059261_3267	0.67	-0.8
3,401,961	+		Ga0059261_3267	0.67	+0.3
3,401,962	-		Ga0059261_3267	0.67	-0.6
3,401,962	-		Ga0059261_3267	0.67	+0.5
3,401,962	-		Ga0059261_3267	0.67	-0.7
3,401,962	-		Ga0059261_3267	0.67	-0.2
3,402,051	+				-0.1
3,402,052	-				+0.1
3,402,052	-				-0.4
3,402,052	-				-0.7
3,402,052	-				+0.5
3,402,214	-		Ga0059261_3268	0.13	-1.8
3,402,291	+		Ga0059261_3268	0.20	-0.0
3,402,291	+		Ga0059261_3268	0.20	+0.5
3,402,292	-		Ga0059261_3268	0.20	+0.7
3,402,292	-		Ga0059261_3268	0.20	-1.0
3,402,398	+		Ga0059261_3268	0.29	+1.7
3,402,398	+		Ga0059261_3268	0.29	-0.2
3,402,399	-		Ga0059261_3268	0.29	-0.7
3,402,435	+		Ga0059261_3268	0.32	-0.2
3,402,436	-		Ga0059261_3268	0.32	+0.0
3,402,454	-		Ga0059261_3268	0.34	+0.3
3,402,454	-		Ga0059261_3268	0.34	-0.9
3,402,550	-		Ga0059261_3268	0.42	-0.4
3,402,550	-		Ga0059261_3268	0.42	+1.5
3,402,698	-		Ga0059261_3268	0.55	-0.4
3,402,698	-		Ga0059261_3268	0.55	+0.6
3,402,909	+		Ga0059261_3268	0.73	+0.4
3,402,910	-		Ga0059261_3268	0.73	+0.1
3,402,910	-		Ga0059261_3268	0.73	-0.3
3,402,954	+		Ga0059261_3268	0.77	+0.7
3,402,963	+		Ga0059261_3268	0.77	-0.5
3,402,963	+		Ga0059261_3268	0.77	+0.1
3,402,964	-		Ga0059261_3268	0.78	-0.5
3,403,143	+				-0.5
3,403,159	-				+0.9
3,403,159	-				+0.3
3,403,198	-				-0.3
3,403,289	-				+0.9
3,403,315	+				-0.2
3,403,316	-				-0.5
3,403,316	-				+0.1
3,403,534	+		Ga0059261_3269	0.25	-1.0
3,403,535	-		Ga0059261_3269	0.25	+0.6
3,403,621	+		Ga0059261_3269	0.38	+0.1
3,403,622	-		Ga0059261_3269	0.38	+0.2
3,403,622	-		Ga0059261_3269	0.38	+1.1
3,403,765	+		Ga0059261_3269	0.60	+0.8
3,403,765	+		Ga0059261_3269	0.60	+0.1
3,403,765	+		Ga0059261_3269	0.60	+0.6
3,403,766	-		Ga0059261_3269	0.60	-0.7
3,403,766	-		Ga0059261_3269	0.60	+0.5
3,403,766	-		Ga0059261_3269	0.60	-0.1
3,403,766	-		Ga0059261_3269	0.60	-0.0
3,403,766	-		Ga0059261_3269	0.60	+0.1
3,404,048	+				-0.2
3,404,066	-				-0.1
3,404,125	+				+1.0
3,404,125	+				+1.0
3,404,126	-				-1.5
3,404,126	-				-0.4
3,404,154	+				-0.2
3,404,183	-				+0.5
3,404,183	-				+0.4