Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2754 and Ga0059261_2755 are separated by 11 nucleotides Ga0059261_2755 and Ga0059261_2756 overlap by 4 nucleotides Ga0059261_2756 and Ga0059261_2757 are separated by 105 nucleotides
Ga0059261_2754: Ga0059261_2754 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 2,863,382 to 2,864,575
_2754
Ga0059261_2755: Ga0059261_2755 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 2,864,587 to 2,865,420
_2755
Ga0059261_2756: Ga0059261_2756 - Predicted endonuclease distantly related to archaeal Holliday junction resolvase, at 2,865,417 to 2,865,770
_2756
Ga0059261_2757: Ga0059261_2757 - glutathione synthase (EC 6.3.2.3), at 2,865,876 to 2,866,832
_2757
Position (kb)
2864
2865
2866 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2863.599 kb on + strand, within Ga0059261_2754 at 2863.600 kb on - strand, within Ga0059261_2754 at 2863.600 kb on - strand, within Ga0059261_2754 at 2863.600 kb on - strand, within Ga0059261_2754 at 2863.647 kb on + strand, within Ga0059261_2754 at 2863.647 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.659 kb on + strand, within Ga0059261_2754 at 2863.660 kb on - strand, within Ga0059261_2754 at 2863.660 kb on - strand, within Ga0059261_2754 at 2863.660 kb on - strand, within Ga0059261_2754 at 2863.660 kb on - strand, within Ga0059261_2754 at 2863.668 kb on + strand, within Ga0059261_2754 at 2863.668 kb on + strand, within Ga0059261_2754 at 2863.668 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.671 kb on + strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.672 kb on - strand, within Ga0059261_2754 at 2863.900 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.902 kb on + strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.903 kb on - strand, within Ga0059261_2754 at 2863.977 kb on + strand, within Ga0059261_2754 at 2864.067 kb on + strand, within Ga0059261_2754 at 2864.067 kb on + strand, within Ga0059261_2754 at 2864.068 kb on - strand, within Ga0059261_2754 at 2864.068 kb on - strand, within Ga0059261_2754 at 2864.068 kb on - strand, within Ga0059261_2754 at 2864.068 kb on - strand, within Ga0059261_2754 at 2864.068 kb on - strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.079 kb on + strand, within Ga0059261_2754 at 2864.080 kb on - strand, within Ga0059261_2754 at 2864.080 kb on - strand, within Ga0059261_2754 at 2864.080 kb on - strand, within Ga0059261_2754 at 2864.080 kb on - strand, within Ga0059261_2754 at 2864.080 kb on - strand, within Ga0059261_2754 at 2864.256 kb on + strand, within Ga0059261_2754 at 2864.256 kb on + strand, within Ga0059261_2754 at 2864.256 kb on + strand, within Ga0059261_2754 at 2864.256 kb on + strand, within Ga0059261_2754 at 2864.561 kb on + strand at 2864.561 kb on + strand at 2864.561 kb on + strand at 2864.561 kb on + strand at 2864.614 kb on + strand at 2864.614 kb on + strand at 2864.614 kb on + strand at 2864.614 kb on + strand at 2864.614 kb on + strand at 2864.614 kb on + strand at 2864.615 kb on - strand at 2864.615 kb on - strand at 2864.615 kb on - strand at 2864.615 kb on - strand at 2864.672 kb on + strand, within Ga0059261_2755 at 2864.672 kb on + strand, within Ga0059261_2755 at 2864.672 kb on + strand, within Ga0059261_2755 at 2864.673 kb on - strand, within Ga0059261_2755 at 2864.688 kb on + strand, within Ga0059261_2755 at 2864.689 kb on - strand, within Ga0059261_2755 at 2864.764 kb on + strand, within Ga0059261_2755 at 2864.764 kb on + strand, within Ga0059261_2755 at 2864.775 kb on + strand, within Ga0059261_2755 at 2864.775 kb on + strand, within Ga0059261_2755 at 2864.775 kb on + strand, within Ga0059261_2755 at 2864.775 kb on + strand, within Ga0059261_2755 at 2864.776 kb on - strand, within Ga0059261_2755 at 2864.776 kb on - strand, within Ga0059261_2755 at 2865.073 kb on + strand, within Ga0059261_2755 at 2865.073 kb on + strand at 2865.074 kb on - strand, within Ga0059261_2755 at 2865.391 kb on + strand at 2865.477 kb on + strand, within Ga0059261_2756 at 2865.477 kb on + strand at 2865.478 kb on - strand, within Ga0059261_2756 at 2865.663 kb on + strand, within Ga0059261_2756 at 2865.664 kb on - strand, within Ga0059261_2756 at 2865.678 kb on + strand, within Ga0059261_2756 at 2865.679 kb on - strand, within Ga0059261_2756 at 2865.745 kb on - strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.790 kb on + strand at 2865.791 kb on - strand at 2865.791 kb on - strand at 2865.791 kb on - strand at 2865.791 kb on - strand at 2865.791 kb on - strand at 2865.791 kb on - strand at 2865.868 kb on + strand at 2865.870 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 2,863,599 + Ga0059261_2754 0.18 +0.0 2,863,600 - Ga0059261_2754 0.18 +0.8 2,863,600 - Ga0059261_2754 0.18 +0.8 2,863,600 - Ga0059261_2754 0.18 +0.8 2,863,647 + Ga0059261_2754 0.22 +0.2 2,863,647 + Ga0059261_2754 0.22 +0.7 2,863,659 + Ga0059261_2754 0.23 +0.6 2,863,659 + Ga0059261_2754 0.23 +1.2 2,863,659 + Ga0059261_2754 0.23 +0.9 2,863,659 + Ga0059261_2754 0.23 +1.0 2,863,659 + Ga0059261_2754 0.23 +0.5 2,863,659 + Ga0059261_2754 0.23 +0.5 2,863,659 + Ga0059261_2754 0.23 +0.5 2,863,659 + Ga0059261_2754 0.23 +0.8 2,863,660 - Ga0059261_2754 0.23 +0.7 2,863,660 - Ga0059261_2754 0.23 +0.2 2,863,660 - Ga0059261_2754 0.23 +1.6 2,863,660 - Ga0059261_2754 0.23 +0.8 2,863,668 + Ga0059261_2754 0.24 +0.5 2,863,668 + Ga0059261_2754 0.24 +0.3 2,863,668 + Ga0059261_2754 0.24 +0.5 2,863,671 + Ga0059261_2754 0.24 +0.7 2,863,671 + Ga0059261_2754 0.24 +0.6 2,863,671 + Ga0059261_2754 0.24 +1.1 2,863,671 + Ga0059261_2754 0.24 +0.7 2,863,671 + Ga0059261_2754 0.24 +0.6 2,863,671 + Ga0059261_2754 0.24 +0.9 2,863,671 + Ga0059261_2754 0.24 +0.9 2,863,671 + Ga0059261_2754 0.24 +0.8 2,863,671 + Ga0059261_2754 0.24 -0.7 2,863,671 + Ga0059261_2754 0.24 +0.5 2,863,671 + Ga0059261_2754 0.24 +0.8 2,863,671 + Ga0059261_2754 0.24 +1.5 2,863,671 + Ga0059261_2754 0.24 -0.2 2,863,671 + Ga0059261_2754 0.24 +0.8 2,863,671 + Ga0059261_2754 0.24 +1.0 2,863,671 + Ga0059261_2754 0.24 +0.9 2,863,672 - Ga0059261_2754 0.24 +0.8 2,863,672 - Ga0059261_2754 0.24 -0.5 2,863,672 - Ga0059261_2754 0.24 +1.3 2,863,672 - Ga0059261_2754 0.24 +1.2 2,863,672 - Ga0059261_2754 0.24 +0.6 2,863,672 - Ga0059261_2754 0.24 +0.3 2,863,900 + Ga0059261_2754 0.43 +0.6 2,863,902 + Ga0059261_2754 0.44 -0.1 2,863,902 + Ga0059261_2754 0.44 +0.7 2,863,902 + Ga0059261_2754 0.44 +1.9 2,863,902 + Ga0059261_2754 0.44 +1.9 2,863,902 + Ga0059261_2754 0.44 +1.1 2,863,902 + Ga0059261_2754 0.44 +0.5 2,863,902 + Ga0059261_2754 0.44 +1.1 2,863,902 + Ga0059261_2754 0.44 +0.5 2,863,902 + Ga0059261_2754 0.44 +0.2 2,863,902 + Ga0059261_2754 0.44 +0.6 2,863,903 - Ga0059261_2754 0.44 +0.6 2,863,903 - Ga0059261_2754 0.44 +0.6 2,863,903 - Ga0059261_2754 0.44 +0.7 2,863,903 - Ga0059261_2754 0.44 +0.5 2,863,903 - Ga0059261_2754 0.44 +0.7 2,863,903 - Ga0059261_2754 0.44 +1.3 2,863,903 - Ga0059261_2754 0.44 +0.9 2,863,903 - Ga0059261_2754 0.44 +0.6 2,863,977 + Ga0059261_2754 0.50 +1.2 2,864,067 + Ga0059261_2754 0.57 +0.7 2,864,067 + Ga0059261_2754 0.57 +0.8 2,864,068 - Ga0059261_2754 0.57 +0.6 2,864,068 - Ga0059261_2754 0.57 +0.2 2,864,068 - Ga0059261_2754 0.57 +1.6 2,864,068 - Ga0059261_2754 0.57 +1.1 2,864,068 - Ga0059261_2754 0.57 +0.5 2,864,079 + Ga0059261_2754 0.58 +0.2 2,864,079 + Ga0059261_2754 0.58 +0.8 2,864,079 + Ga0059261_2754 0.58 -0.0 2,864,079 + Ga0059261_2754 0.58 +0.4 2,864,079 + Ga0059261_2754 0.58 +0.6 2,864,079 + Ga0059261_2754 0.58 +0.7 2,864,079 + Ga0059261_2754 0.58 +0.5 2,864,079 + Ga0059261_2754 0.58 +0.7 2,864,079 + Ga0059261_2754 0.58 +0.7 2,864,079 + Ga0059261_2754 0.58 +0.3 2,864,080 - Ga0059261_2754 0.58 +0.8 2,864,080 - Ga0059261_2754 0.58 +0.5 2,864,080 - Ga0059261_2754 0.58 +0.4 2,864,080 - Ga0059261_2754 0.58 +0.6 2,864,080 - Ga0059261_2754 0.58 +0.7 2,864,256 + Ga0059261_2754 0.73 +0.3 2,864,256 + Ga0059261_2754 0.73 +0.5 2,864,256 + Ga0059261_2754 0.73 -0.4 2,864,256 + Ga0059261_2754 0.73 +0.5 2,864,561 + +0.5 2,864,561 + +1.1 2,864,561 + +0.8 2,864,561 + -0.1 2,864,614 + +0.6 2,864,614 + +1.8 2,864,614 + -0.2 2,864,614 + -1.5 2,864,614 + +0.3 2,864,614 + +1.5 2,864,615 - -1.7 2,864,615 - -0.8 2,864,615 - -2.8 2,864,615 - -2.0 2,864,672 + Ga0059261_2755 0.10 -0.5 2,864,672 + Ga0059261_2755 0.10 -0.2 2,864,672 + Ga0059261_2755 0.10 -1.4 2,864,673 - Ga0059261_2755 0.10 -1.3 2,864,688 + Ga0059261_2755 0.12 -0.5 2,864,689 - Ga0059261_2755 0.12 -0.6 2,864,764 + Ga0059261_2755 0.21 -0.6 2,864,764 + Ga0059261_2755 0.21 -2.8 2,864,775 + Ga0059261_2755 0.23 -1.3 2,864,775 + Ga0059261_2755 0.23 -0.1 2,864,775 + Ga0059261_2755 0.23 -1.0 2,864,775 + Ga0059261_2755 0.23 -2.2 2,864,776 - Ga0059261_2755 0.23 -2.5 2,864,776 - Ga0059261_2755 0.23 -0.0 2,865,073 + Ga0059261_2755 0.58 -1.2 2,865,073 + -0.5 2,865,074 - Ga0059261_2755 0.58 -2.6 2,865,391 + -2.0 2,865,477 + Ga0059261_2756 0.17 -0.2 2,865,477 + -0.9 2,865,478 - Ga0059261_2756 0.17 -0.1 2,865,663 + Ga0059261_2756 0.69 +0.4 2,865,664 - Ga0059261_2756 0.70 -0.2 2,865,678 + Ga0059261_2756 0.74 +0.4 2,865,679 - Ga0059261_2756 0.74 -0.5 2,865,745 - -0.0 2,865,790 + +1.1 2,865,790 + -0.1 2,865,790 + +0.5 2,865,790 + +0.3 2,865,790 + +0.0 2,865,790 + +0.6 2,865,790 + -0.0 2,865,791 - -0.9 2,865,791 - -0.0 2,865,791 - +0.1 2,865,791 - -0.3 2,865,791 - -0.1 2,865,791 - -0.3 2,865,868 + -0.9 2,865,870 + -0.7
Or see this region's nucleotide sequence