Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0720

Experiment: NAG (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_0719 and Ga0059261_0720 are separated by 58 nucleotidesGa0059261_0720 and Ga0059261_0721 are separated by 19 nucleotidesGa0059261_0721 and Ga0059261_0722 are separated by 99 nucleotides Ga0059261_0719: Ga0059261_0719 - Uncharacterized protein conserved in bacteria, at 752,765 to 753,802 _0719 Ga0059261_0720: Ga0059261_0720 - Predicted small integral membrane protein, at 753,861 to 754,268 _0720 Ga0059261_0721: Ga0059261_0721 - thiamine-phosphate diphosphorylase, at 754,288 to 754,977 _0721 Ga0059261_0722: Ga0059261_0722 - L-aminopeptidase/D-esterase, at 755,077 to 756,216 _0722 Position (kb) 753 754 755Strain fitness (log2 ratio) -2 -1 0 1 2at 752.971 kb on + strand, within Ga0059261_0719at 753.010 kb on + strand, within Ga0059261_0719at 753.011 kb on - strand, within Ga0059261_0719at 753.247 kb on - strand, within Ga0059261_0719at 753.263 kb on + strand, within Ga0059261_0719at 753.264 kb on - strand, within Ga0059261_0719at 753.308 kb on - strand, within Ga0059261_0719at 753.577 kb on + strand, within Ga0059261_0719at 753.650 kb on - strand, within Ga0059261_0719at 753.668 kb on - strand, within Ga0059261_0719at 753.668 kb on - strand, within Ga0059261_0719at 753.995 kb on + strand, within Ga0059261_0720at 753.995 kb on + strand, within Ga0059261_0720at 753.996 kb on - strand, within Ga0059261_0720at 753.996 kb on - strand, within Ga0059261_0720at 754.144 kb on + strand, within Ga0059261_0720at 754.242 kb on + strandat 754.256 kb on + strandat 754.256 kb on + strandat 754.256 kb on + strandat 754.256 kb on + strandat 754.256 kb on + strandat 754.257 kb on - strandat 754.257 kb on - strandat 754.257 kb on - strandat 754.257 kb on - strandat 754.289 kb on + strandat 754.289 kb on + strandat 754.986 kb on + strandat 754.986 kb on + strandat 754.986 kb on + strandat 754.987 kb on - strandat 754.987 kb on - strandat 754.987 kb on - strandat 754.987 kb on - strandat 754.987 kb on - strandat 754.988 kb on + strandat 754.988 kb on + strandat 754.989 kb on - strandat 754.989 kb on - strandat 754.989 kb on - strandat 755.268 kb on + strand, within Ga0059261_0722

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG (C)
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752,971 + Ga0059261_0719 0.20 -1.7
753,010 + Ga0059261_0719 0.24 -0.3
753,011 - Ga0059261_0719 0.24 -0.6
753,247 - Ga0059261_0719 0.46 -0.0
753,263 + Ga0059261_0719 0.48 -0.4
753,264 - Ga0059261_0719 0.48 -0.9
753,308 - Ga0059261_0719 0.52 -0.3
753,577 + Ga0059261_0719 0.78 -2.0
753,650 - Ga0059261_0719 0.85 -1.1
753,668 - Ga0059261_0719 0.87 -0.6
753,668 - Ga0059261_0719 0.87 -1.6
753,995 + Ga0059261_0720 0.33 -0.6
753,995 + Ga0059261_0720 0.33 +0.2
753,996 - Ga0059261_0720 0.33 -0.8
753,996 - Ga0059261_0720 0.33 -0.9
754,144 + Ga0059261_0720 0.69 -0.1
754,242 + +0.2
754,256 + +0.1
754,256 + -0.1
754,256 + +0.1
754,256 + +0.7
754,256 + -0.3
754,257 - +0.4
754,257 - +0.0
754,257 - -0.5
754,257 - -0.7
754,289 + +0.7
754,289 + -0.2
754,986 + -0.4
754,986 + +0.7
754,986 + +1.7
754,987 - -0.7
754,987 - -0.6
754,987 - +0.4
754,987 - +0.7
754,987 - -0.4
754,988 + +0.7
754,988 + +2.3
754,989 - -0.3
754,989 - +0.4
754,989 - +0.0
755,268 + Ga0059261_0722 0.17 -0.1

Or see this region's nucleotide sequence