Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2847

Experiment: nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 100 mM
1,151,066	+		Ac3H11_2845	0.80	-0.4
1,151,066	+		Ac3H11_2845	0.80	-0.1
1,151,067	-		Ac3H11_2845	0.80	+1.2
1,151,075	+		Ac3H11_2845	0.81	-1.2
1,151,075	+		Ac3H11_2845	0.81	+2.2
1,151,075	+		Ac3H11_2845	0.81	+0.8
1,151,076	-		Ac3H11_2845	0.82	+0.1
1,151,076	-		Ac3H11_2845	0.82	-1.2
1,151,076	-		Ac3H11_2845	0.82	-1.5
1,151,114	+		Ac3H11_2845	0.87	-2.2
1,151,114	+		Ac3H11_2845	0.87	-1.0
1,151,114	+		Ac3H11_2845	0.87	-0.2
1,151,114	+		Ac3H11_2845	0.87	+1.4
1,151,114	+		Ac3H11_2845	0.87	+0.8
1,151,114	+		Ac3H11_2845	0.87	-0.2
1,151,114	+		Ac3H11_2845	0.87	+0.5
1,151,115	-		Ac3H11_2845	0.87	+0.0
1,151,115	-		Ac3H11_2845	0.87	-2.3
1,151,115	-		Ac3H11_2845	0.87	+2.9
1,151,139	-				-0.0
1,151,139	-				-1.2
1,151,208	-				+0.4
1,151,208	-				-0.3
1,151,208	-				-0.6
1,151,304	-				+0.6
1,151,332	+				-0.1
1,151,332	+				-1.1
1,151,332	+				-0.9
1,151,332	+				-0.5
1,151,332	+				+0.6
1,151,332	+				-0.0
1,151,332	+				-0.4
1,151,332	+				-1.1
1,151,332	+				-2.1
1,151,332	+				+1.1
1,151,332	+				+0.8
1,151,332	+				+0.1
1,151,333	-				-3.0
1,151,333	-				-0.8
1,151,333	-				-2.5
1,151,333	-				+0.3
1,151,333	-				+0.6
1,151,333	-				-1.0
1,151,333	-				-0.3
1,151,333	-				+0.3
1,151,333	-				+0.7
1,151,333	-				-0.4
1,151,338	+				-2.7
1,151,338	+				-0.7
1,151,338	+				-0.2
1,151,338	+				+0.2
1,151,338	+				-0.1
1,151,338	+				-0.2
1,151,338	+				-0.0
1,151,338	+				+0.2
1,151,338	+				-3.5
1,151,338	+				+1.8
1,151,338	+				+0.2
1,151,338	+				+1.6
1,151,338	+				-1.2
1,151,338	+				-0.2
1,151,338	+				-0.4
1,151,338	+				-1.2
1,151,338	+				-0.2
1,151,339	-				-2.0
1,151,339	-				-0.9
1,151,339	-				+0.1
1,151,339	-				-0.4
1,151,339	-				-0.8
1,151,339	-				-0.1
1,151,339	-				-0.4
1,151,339	-				+0.2
1,151,339	-				-0.2
1,151,339	-				-0.4
1,151,518	+		Ac3H11_2846	0.47	-0.4
1,151,518	+		Ac3H11_2846	0.47	-1.1
1,151,518	+		Ac3H11_2846	0.47	+0.2
1,151,518	+		Ac3H11_2846	0.47	+0.6
1,151,518	+		Ac3H11_2846	0.47	+0.8
1,151,519	-		Ac3H11_2846	0.47	+1.0
1,151,519	-		Ac3H11_2846	0.47	-3.2
1,151,519	-		Ac3H11_2846	0.47	-1.1
1,151,519	-		Ac3H11_2846	0.47	+0.3
1,151,519	-		Ac3H11_2846	0.47	+0.4
1,151,581	+		Ac3H11_2846	0.63	-2.9
1,151,581	+		Ac3H11_2846	0.63	-0.6
1,151,581	+		Ac3H11_2846	0.63	-0.3
1,151,581	+		Ac3H11_2846	0.63	+1.2
1,151,581	+		Ac3H11_2846	0.63	+0.2
1,151,581	+		Ac3H11_2846	0.63	-0.7
1,151,581	+		Ac3H11_2846	0.63	-0.9
1,151,581	+		Ac3H11_2846	0.63	-1.2
1,151,581	+		Ac3H11_2846	0.63	-0.4
1,151,581	+		Ac3H11_2846	0.63	+1.2
1,151,582	-		Ac3H11_2846	0.63	+0.4
1,151,582	-		Ac3H11_2846	0.63	+0.5
1,151,582	-		Ac3H11_2846	0.63	-0.0
1,151,582	-		Ac3H11_2846	0.63	-2.0
1,151,582	-		Ac3H11_2846	0.63	+0.9
1,151,850	+				+0.2
1,151,850	+				-1.4
1,151,850	+				-0.2
1,151,932	-				+0.6
1,151,994	+				-1.9
1,151,994	+				-0.6
1,151,994	+				-3.4
1,151,994	+				-2.4
1,151,994	+				+1.0
1,151,994	+				+0.3
1,151,995	-		Ac3H11_2847	0.10	-0.3
1,151,995	-		Ac3H11_2847	0.10	-2.5
1,151,995	-		Ac3H11_2847	0.10	+2.3
1,151,995	-		Ac3H11_2847	0.10	-1.4
1,151,995	-		Ac3H11_2847	0.10	+0.5
1,152,255	+		Ac3H11_2847	0.28	-1.8
1,152,256	-		Ac3H11_2847	0.28	+1.3
1,152,498	+		Ac3H11_2847	0.44	+0.2
1,152,498	+		Ac3H11_2847	0.44	+0.4
1,152,499	-		Ac3H11_2847	0.44	-1.5
1,152,499	-		Ac3H11_2847	0.44	-1.4
1,152,761	+		Ac3H11_2847	0.62	-1.1
1,152,761	+		Ac3H11_2847	0.62	+0.6
1,152,762	-		Ac3H11_2847	0.62	+0.2
1,152,762	-		Ac3H11_2847	0.62	-1.3
1,152,762	-		Ac3H11_2847	0.62	+1.2
1,152,762	-		Ac3H11_2847	0.62	+0.4
1,152,762	-		Ac3H11_2847	0.62	+0.6
1,152,789	+		Ac3H11_2847	0.64	+0.6
1,152,789	+		Ac3H11_2847	0.64	-1.5
1,152,790	-		Ac3H11_2847	0.64	+0.9
1,152,790	-		Ac3H11_2847	0.64	-0.9
1,152,790	-		Ac3H11_2847	0.64	+1.2
1,153,165	+				-0.5
1,153,165	+				+0.4
1,153,289	+				+0.4
1,153,289	+				+0.3
1,153,289	+				+0.4
1,153,289	+				+0.9
1,153,289	+				-0.2
1,153,289	+				-0.3
1,153,290	-				-3.1
1,153,290	-				+1.1
1,153,290	-				+0.9
1,153,290	-				-0.3
1,153,290	-				-0.4
1,153,290	-				-0.5
1,153,290	-				+0.5
1,153,514	+		Ac3H11_2848	0.55	-0.0
1,153,514	+		Ac3H11_2848	0.55	+1.9
1,153,514	+		Ac3H11_2848	0.55	-0.1
1,153,540	+		Ac3H11_2848	0.64	-0.2
1,153,541	-		Ac3H11_2848	0.64	+0.4
1,153,564	+		Ac3H11_2848	0.72	-0.5
1,153,564	+		Ac3H11_2848	0.72	-1.1
1,153,565	-		Ac3H11_2848	0.72	-0.6
1,153,565	-		Ac3H11_2848	0.72	+0.3
1,153,573	+		Ac3H11_2848	0.75	-2.6
1,153,573	+		Ac3H11_2848	0.75	-0.6
1,153,573	+		Ac3H11_2848	0.75	-0.5
1,153,574	-		Ac3H11_2848	0.75	+0.1
1,153,574	-		Ac3H11_2848	0.75	+0.9
1,153,574	-		Ac3H11_2848	0.75	-0.1
1,153,574	-		Ac3H11_2848	0.75	+0.1
1,153,574	-		Ac3H11_2848	0.75	+0.2
1,153,574	-		Ac3H11_2848	0.75	-0.4
1,153,574	-		Ac3H11_2848	0.75	+0.2
1,153,574	-		Ac3H11_2848	0.75	-0.8
1,153,574	-		Ac3H11_2848	0.75	-1.3
1,153,574	-		Ac3H11_2848	0.75	+0.5
1,153,684	+				+0.7
1,153,684	+				-2.4
1,153,685	-				-2.3
1,153,685	-				-0.3
1,153,685	-				+0.4
1,153,797	+		Ac3H11_2849	0.10	-1.9
1,153,797	+		Ac3H11_2849	0.10	-0.3
1,153,797	+		Ac3H11_2849	0.10	-0.5
1,153,797	+		Ac3H11_2849	0.10	-0.7
1,153,797	+		Ac3H11_2849	0.10	+1.6
1,153,797	+		Ac3H11_2849	0.10	-0.5
1,153,797	+		Ac3H11_2849	0.10	-2.1
1,153,797	+		Ac3H11_2849	0.10	+0.5
1,153,797	+		Ac3H11_2849	0.10	-0.1
1,153,798	-		Ac3H11_2849	0.11	-0.6
1,153,798	-		Ac3H11_2849	0.11	+0.4
1,153,798	-		Ac3H11_2849	0.11	-0.6
1,153,798	-		Ac3H11_2849	0.11	+0.9
1,153,798	-		Ac3H11_2849	0.11	-1.3
1,153,798	-		Ac3H11_2849	0.11	-1.9
1,153,798	-		Ac3H11_2849	0.11	-0.9
1,153,798	-		Ac3H11_2849	0.11	-0.7
1,153,798	-		Ac3H11_2849	0.11	-1.7
1,153,798	-		Ac3H11_2849	0.11	-0.4
1,153,798	-		Ac3H11_2849	0.11	-3.0
1,153,893	+		Ac3H11_2849	0.31	-0.8
1,153,894	-		Ac3H11_2849	0.31	-0.4
1,153,894	-		Ac3H11_2849	0.31	-2.6
1,153,940	+		Ac3H11_2849	0.41	-0.6
1,153,940	+		Ac3H11_2849	0.41	-0.1
1,153,941	-		Ac3H11_2849	0.41	-1.9
1,153,941	-		Ac3H11_2849	0.41	-0.1
1,153,941	-		Ac3H11_2849	0.41	-0.1
1,153,941	-		Ac3H11_2849	0.41	-0.4
1,153,941	-		Ac3H11_2849	0.41	-0.3
1,154,055	+		Ac3H11_2849	0.65	+0.0
1,154,056	-		Ac3H11_2849	0.65	-1.0
1,154,228	+				-0.1
1,154,229	-				-0.8
1,154,232	+				-0.3
1,154,232	+				+0.5
1,154,233	-				+0.9
1,154,246	-				+0.8
1,154,268	-				+0.4