Experiment: nitrate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1976 and Ac3H11_1977 are separated by 170 nucleotides Ac3H11_1977 and Ac3H11_1978 are separated by 71 nucleotides
Ac3H11_1976 - RNA 3'-terminal phosphate cyclase (EC 6.5.1.4), at 188,121 to 189,260
_1976
Ac3H11_1977 - Protein RtcB, at 189,431 to 190,702
_1977
Ac3H11_1978 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 190,774 to 191,916
_1978
Position (kb) 189
190
191 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 189.003 kb on + strand, within Ac3H11_1976 at 189.004 kb on - strand, within Ac3H11_1976 at 189.297 kb on + strand at 189.297 kb on + strand at 189.297 kb on + strand at 189.298 kb on - strand at 189.315 kb on + strand at 189.316 kb on - strand at 189.335 kb on - strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.465 kb on + strand at 189.466 kb on - strand at 189.519 kb on + strand at 189.519 kb on + strand at 189.520 kb on - strand at 189.810 kb on + strand, within Ac3H11_1977 at 189.810 kb on + strand, within Ac3H11_1977 at 189.810 kb on + strand, within Ac3H11_1977 at 189.810 kb on + strand, within Ac3H11_1977 at 189.811 kb on - strand, within Ac3H11_1977 at 189.811 kb on - strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.951 kb on + strand, within Ac3H11_1977 at 189.952 kb on - strand, within Ac3H11_1977 at 189.964 kb on - strand, within Ac3H11_1977 at 189.985 kb on - strand, within Ac3H11_1977 at 190.124 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.176 kb on + strand, within Ac3H11_1977 at 190.177 kb on - strand, within Ac3H11_1977 at 190.177 kb on - strand, within Ac3H11_1977 at 190.177 kb on - strand, within Ac3H11_1977 at 190.177 kb on - strand, within Ac3H11_1977 at 190.632 kb on + strand at 190.632 kb on + strand at 190.632 kb on + strand at 190.632 kb on + strand at 190.641 kb on + strand at 190.641 kb on + strand at 190.642 kb on - strand at 191.112 kb on - strand, within Ac3H11_1978 at 191.249 kb on + strand, within Ac3H11_1978 at 191.250 kb on - strand, within Ac3H11_1978 at 191.250 kb on - strand, within Ac3H11_1978 at 191.255 kb on + strand, within Ac3H11_1978 at 191.255 kb on + strand, within Ac3H11_1978 at 191.255 kb on + strand, within Ac3H11_1978 at 191.255 kb on + strand, within Ac3H11_1978 at 191.256 kb on - strand, within Ac3H11_1978 at 191.387 kb on + strand, within Ac3H11_1978 at 191.387 kb on + strand, within Ac3H11_1978 at 191.388 kb on - strand, within Ac3H11_1978 at 191.388 kb on - strand, within Ac3H11_1978 at 191.603 kb on + strand, within Ac3H11_1978
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 100 mM remove 189,003 + Ac3H11_1976 0.77 -0.6 189,004 - Ac3H11_1976 0.77 -0.3 189,297 + -1.0 189,297 + +0.0 189,297 + +1.2 189,298 - -1.2 189,315 + +0.6 189,316 - +0.0 189,335 - -1.2 189,465 + -0.6 189,465 + -0.2 189,465 + +0.5 189,465 + +0.3 189,465 + +0.3 189,465 + -0.6 189,465 + +1.4 189,465 + +0.1 189,465 + -0.4 189,466 - -0.1 189,519 + -0.2 189,519 + +0.4 189,520 - -0.6 189,810 + Ac3H11_1977 0.30 -2.2 189,810 + Ac3H11_1977 0.30 -0.8 189,810 + Ac3H11_1977 0.30 -0.6 189,810 + Ac3H11_1977 0.30 +0.5 189,811 - Ac3H11_1977 0.30 -1.5 189,811 - Ac3H11_1977 0.30 -0.1 189,951 + Ac3H11_1977 0.41 -0.1 189,951 + Ac3H11_1977 0.41 -2.0 189,951 + Ac3H11_1977 0.41 +0.9 189,951 + Ac3H11_1977 0.41 +0.2 189,951 + Ac3H11_1977 0.41 -1.9 189,951 + Ac3H11_1977 0.41 -1.1 189,951 + Ac3H11_1977 0.41 +0.3 189,952 - Ac3H11_1977 0.41 -1.7 189,964 - Ac3H11_1977 0.42 -0.6 189,985 - Ac3H11_1977 0.44 -0.4 190,124 + Ac3H11_1977 0.54 -1.0 190,176 + Ac3H11_1977 0.59 +0.5 190,176 + Ac3H11_1977 0.59 -0.5 190,176 + Ac3H11_1977 0.59 -0.8 190,176 + Ac3H11_1977 0.59 +1.0 190,176 + Ac3H11_1977 0.59 -0.0 190,176 + Ac3H11_1977 0.59 +0.9 190,177 - Ac3H11_1977 0.59 +0.2 190,177 - Ac3H11_1977 0.59 -2.6 190,177 - Ac3H11_1977 0.59 -0.6 190,177 - Ac3H11_1977 0.59 -1.4 190,632 + +0.1 190,632 + +0.8 190,632 + +4.6 190,632 + -1.9 190,641 + -0.1 190,641 + -2.9 190,642 - +0.0 191,112 - Ac3H11_1978 0.30 -1.5 191,249 + Ac3H11_1978 0.42 -0.6 191,250 - Ac3H11_1978 0.42 -2.4 191,250 - Ac3H11_1978 0.42 +0.6 191,255 + Ac3H11_1978 0.42 +0.8 191,255 + Ac3H11_1978 0.42 -0.7 191,255 + Ac3H11_1978 0.42 -2.5 191,255 + Ac3H11_1978 0.42 +0.6 191,256 - Ac3H11_1978 0.42 -0.2 191,387 + Ac3H11_1978 0.54 +1.0 191,387 + Ac3H11_1978 0.54 -0.9 191,388 - Ac3H11_1978 0.54 -0.4 191,388 - Ac3H11_1978 0.54 +0.4 191,603 + Ac3H11_1978 0.73 -2.3
Or see this region's nucleotide sequence