Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29375

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
6,381,678	+				-1.8
6,381,678	+				-0.6
6,381,678	+				-0.0
6,381,678	+				+0.4
6,381,832	+		AO353_29370	0.24	-0.8
6,381,832	+		AO353_29370	0.24	-0.8
6,381,856	+		AO353_29370	0.27	+0.7
6,381,856	+		AO353_29370	0.27	-0.9
6,381,856	+		AO353_29370	0.27	+0.5
6,381,856	+		AO353_29370	0.27	-0.5
6,381,856	+		AO353_29370	0.27	+0.8
6,381,856	+		AO353_29370	0.27	+1.8
6,381,856	+		AO353_29370	0.27	-0.3
6,381,856	+		AO353_29370	0.27	-0.0
6,381,857	-		AO353_29370	0.28	-1.5
6,381,857	-		AO353_29370	0.28	-0.3
6,381,993	+		AO353_29370	0.49	+0.1
6,381,993	+		AO353_29370	0.49	-0.3
6,381,993	+		AO353_29370	0.49	-0.5
6,381,993	+		AO353_29370	0.49	+0.4
6,381,993	+		AO353_29370	0.49	+0.2
6,382,046	+		AO353_29370	0.57	+0.1
6,382,046	+		AO353_29370	0.57	+0.1
6,382,046	+		AO353_29370	0.57	+1.5
6,382,047	-		AO353_29370	0.57	-0.5
6,382,047	-		AO353_29370	0.57	-0.6
6,382,047	-		AO353_29370	0.57	+0.4
6,382,047	-		AO353_29370	0.57	-2.0
6,382,047	-		AO353_29370	0.57	+0.3
6,382,383	+				-2.2
6,382,440	+				+0.2
6,382,440	+				+0.1
6,382,440	+				-0.0
6,382,440	+				-0.5
6,382,440	+				+1.1
6,382,440	+				-1.5
6,382,440	+				-1.6
6,382,441	-				-0.3
6,382,441	-				+0.8
6,382,441	-				+1.5
6,382,441	-				+0.3
6,382,441	-				-1.3
6,382,755	+		AO353_29375	0.27	-0.6
6,382,755	+		AO353_29375	0.27	-2.7
6,382,755	+		AO353_29375	0.27	-0.2
6,382,755	+		AO353_29375	0.27	-0.3
6,382,755	+		AO353_29375	0.27	-1.6
6,382,755	+		AO353_29375	0.27	-1.8
6,382,755	+		AO353_29375	0.27	+1.5
6,382,755	+		AO353_29375	0.27	+1.0
6,382,755	+		AO353_29375	0.27	-1.3
6,382,755	+		AO353_29375	0.27	+1.7
6,382,756	-		AO353_29375	0.27	-1.5
6,382,756	-		AO353_29375	0.27	+1.5
6,382,756	-		AO353_29375	0.27	+0.3
6,382,756	-		AO353_29375	0.27	-0.2
6,382,756	-		AO353_29375	0.27	-0.3
6,382,856	+		AO353_29375	0.33	+1.8
6,382,856	+		AO353_29375	0.33	-1.6
6,382,856	+		AO353_29375	0.33	+0.2
6,382,857	-		AO353_29375	0.33	+0.1
6,382,892	+		AO353_29375	0.36	-0.2
6,382,892	+		AO353_29375	0.36	-0.5
6,382,892	+		AO353_29375	0.36	+0.9
6,382,892	+				+0.7
6,382,893	-		AO353_29375	0.36	+0.5
6,382,893	-		AO353_29375	0.36	-0.5
6,382,893	-		AO353_29375	0.36	+0.4
6,382,893	-		AO353_29375	0.36	-1.3
6,382,893	-		AO353_29375	0.36	-0.7
6,382,893	-		AO353_29375	0.36	-0.8
6,382,893	-		AO353_29375	0.36	+0.5
6,382,893	-		AO353_29375	0.36	-0.8
6,382,958	+		AO353_29375	0.39	+0.3
6,382,958	+		AO353_29375	0.39	+0.2
6,382,958	+		AO353_29375	0.39	+1.0
6,382,958	+		AO353_29375	0.39	-0.8
6,382,959	-		AO353_29375	0.40	-1.3
6,382,959	-		AO353_29375	0.40	+0.8
6,382,959	-		AO353_29375	0.40	+0.0
6,382,959	-		AO353_29375	0.40	-1.3
6,382,959	-		AO353_29375	0.40	-0.9
6,382,959	-		AO353_29375	0.40	-0.0
6,382,959	-		AO353_29375	0.40	-0.2
6,382,959	-		AO353_29375	0.40	-0.6
6,382,959	-		AO353_29375	0.40	+0.2
6,382,959	-		AO353_29375	0.40	+1.5
6,383,072	-		AO353_29375	0.46	-0.6
6,383,072	-		AO353_29375	0.46	+1.5
6,383,072	-		AO353_29375	0.46	-0.2
6,383,090	+		AO353_29375	0.47	-1.8
6,383,091	-		AO353_29375	0.48	+0.5
6,383,291	+		AO353_29375	0.60	-0.2
6,383,292	-		AO353_29375	0.60	-0.3
6,383,292	-		AO353_29375	0.60	+1.3
6,383,339	+		AO353_29375	0.62	-1.3
6,383,340	-		AO353_29375	0.63	+0.8
6,383,366	-		AO353_29375	0.64	+0.5
6,383,390	+		AO353_29375	0.66	+1.5
6,383,390	+		AO353_29375	0.66	-0.4
6,383,390	+		AO353_29375	0.66	+0.3
6,383,390	+		AO353_29375	0.66	-0.2
6,383,390	+		AO353_29375	0.66	-0.4
6,383,391	-		AO353_29375	0.66	-1.0
6,383,391	-		AO353_29375	0.66	-1.8
6,383,391	-		AO353_29375	0.66	+0.5
6,383,391	-		AO353_29375	0.66	+0.9
6,383,391	-		AO353_29375	0.66	+0.1
6,383,391	-		AO353_29375	0.66	+0.5
6,383,391	-		AO353_29375	0.66	-0.0
6,383,391	-		AO353_29375	0.66	-0.4
6,383,495	+		AO353_29375	0.72	-0.0
6,383,495	+		AO353_29375	0.72	-1.7
6,383,495	+		AO353_29375	0.72	+0.3
6,383,495	+		AO353_29375	0.72	+0.9
6,383,496	-		AO353_29375	0.72	-1.3
6,383,496	-		AO353_29375	0.72	+0.3
6,383,496	-		AO353_29375	0.72	+0.4
6,383,496	-				-0.3
6,383,496	-		AO353_29375	0.72	-2.3
6,383,496	-		AO353_29375	0.72	-0.3
6,383,496	-		AO353_29375	0.72	-0.8
6,383,689	+		AO353_29375	0.84	-0.6
6,383,689	+		AO353_29375	0.84	+0.9
6,383,689	+		AO353_29375	0.84	-0.6
6,383,690	-		AO353_29375	0.84	-2.0
6,383,690	-		AO353_29375	0.84	-0.7
6,383,730	+		AO353_29375	0.86	-1.1
6,383,730	+		AO353_29375	0.86	-1.6
6,383,730	+		AO353_29375	0.86	+0.2
6,383,730	+		AO353_29375	0.86	+0.7
6,383,731	-		AO353_29375	0.86	-0.4
6,383,731	-		AO353_29375	0.86	+0.2
6,383,731	-		AO353_29375	0.86	-0.3
6,383,755	+		AO353_29375	0.88	+0.2
6,383,755	+		AO353_29375	0.88	+1.7
6,383,756	-		AO353_29375	0.88	-1.5
6,383,756	-		AO353_29375	0.88	+0.4
6,383,756	-		AO353_29375	0.88	+0.8
6,383,873	+				+0.6
6,383,873	+				-0.9
6,383,874	-				-0.2
6,383,874	-				-0.5
6,383,926	+				+0.3
6,383,927	-				+1.9
6,383,927	-				-1.3
6,383,980	+				-2.2
6,383,980	+				-1.2
6,383,980	+				-0.1
6,383,980	+				+1.1
6,383,980	+				-2.5
6,383,981	-				-0.7
6,383,981	-				-0.5
6,384,050	+		AO353_29380	0.13	+1.1
6,384,056	-		AO353_29380	0.14	+1.0
6,384,326	+		AO353_29380	0.63	-0.7
6,384,465	+		AO353_29380	0.87	-0.7
6,384,465	+		AO353_29380	0.87	-1.0
6,384,465	+		AO353_29380	0.87	-0.7
6,384,465	+		AO353_29380	0.87	+0.7
6,384,465	+		AO353_29380	0.87	+1.5
6,384,465	+		AO353_29380	0.87	-2.5
6,384,465	+		AO353_29380	0.87	+1.5
6,384,465	+		AO353_29380	0.87	-1.2
6,384,465	+		AO353_29380	0.87	-2.0
6,384,466	-		AO353_29380	0.88	+0.0
6,384,533	+				-0.2
6,384,533	+				-1.3
6,384,534	-				-0.3
6,384,542	+				-0.8
6,384,542	+				-0.8
6,384,542	+				+1.0
6,384,542	+				-0.6
6,384,542	+				-1.3
6,384,543	-				+0.5
6,384,543	-				-1.1
6,384,547	+				-1.6
6,384,547	+				-0.0
6,384,547	+				-0.3
6,384,547	+				+0.9
6,384,548	-				+0.4
6,384,548	-				+0.3
6,384,548	-				-0.1
6,384,548	-				-1.8
6,384,555	+				+1.0
6,384,556	-				-0.5
6,384,556	-				+0.4
6,384,556	-				-0.4
6,384,641	+				-0.0
6,384,642	-				+1.0
6,384,642	-				+0.1
6,384,657	+				+0.0
6,384,657	+				-0.8
6,384,658	-				-1.0
6,384,658	-				-1.9
6,384,658	-				+1.1
6,384,658	-				+1.4
6,384,660	+		AO353_29385	0.10	+0.4
6,384,695	+		AO353_29385	0.13	-1.7
6,384,743	+		AO353_29385	0.18	-0.9
6,384,743	+		AO353_29385	0.18	+0.4
6,384,815	+		AO353_29385	0.25	+0.5
6,384,816	-		AO353_29385	0.25	+1.1
6,384,921	-		AO353_29385	0.35	+1.1
6,384,921	-		AO353_29385	0.35	-0.5
6,384,921	-		AO353_29385	0.35	-0.6
6,384,922	+		AO353_29385	0.35	+0.9
6,384,922	+		AO353_29385	0.35	-1.9
6,384,922	+		AO353_29385	0.35	-0.3
6,384,922	+		AO353_29385	0.35	+0.5
6,384,922	+		AO353_29385	0.35	-0.5
6,384,922	+		AO353_29385	0.35	-0.8
6,384,923	-		AO353_29385	0.35	+0.8
6,384,923	-		AO353_29385	0.35	-0.0
6,384,923	-		AO353_29385	0.35	+0.2