Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29365

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
6,380,089	+		AO353_29355	0.57	+0.7
6,380,089	+		AO353_29355	0.57	-0.0
6,380,089	+		AO353_29355	0.57	-0.7
6,380,089	+		AO353_29355	0.57	+0.4
6,380,089	+		AO353_29355	0.57	+0.2
6,380,107	+		AO353_29355	0.63	+0.5
6,380,107	+		AO353_29355	0.63	-0.3
6,380,108	-		AO353_29355	0.63	-0.5
6,380,108	-		AO353_29355	0.63	+2.0
6,380,329	+				-1.5
6,380,329	+				+1.0
6,380,329	+				+1.5
6,380,330	-				+0.1
6,380,330	-				-0.2
6,380,330	-				-1.3
6,380,330	-				-1.5
6,380,330	-				+0.5
6,380,377	+				-0.3
6,380,378	-				-0.5
6,380,387	+				-0.7
6,380,387	+				-0.3
6,380,387	+				-1.5
6,380,387	+				-0.2
6,380,389	+				-1.3
6,380,389	+				-0.8
6,380,389	+				-0.2
6,380,390	-				+0.0
6,380,390	-				+0.0
6,380,390	-				-0.0
6,380,390	-				-0.5
6,380,419	-				+0.5
6,380,422	+				-1.0
6,380,422	+				+0.0
6,380,422	+				+0.4
6,380,422	+				-0.4
6,380,422	+				-0.2
6,380,422	+				-0.0
6,380,422	+				-0.9
6,380,422	+				+1.3
6,380,422	+				+0.8
6,380,422	+				-0.7
6,380,422	+				+1.5
6,380,422	+				-1.8
6,380,423	-				-0.9
6,380,423	-				-1.0
6,380,471	+				+0.5
6,380,472	-				+0.9
6,380,472	-				+0.4
6,380,499	+		AO353_29360	0.13	-2.0
6,380,499	+		AO353_29360	0.13	-0.2
6,380,499	+		AO353_29360	0.13	-0.5
6,380,499	+		AO353_29360	0.13	+0.8
6,380,499	+		AO353_29360	0.13	+0.5
6,380,499	+		AO353_29360	0.13	-0.4
6,380,499	+		AO353_29360	0.13	+1.3
6,380,500	-		AO353_29360	0.13	+0.5
6,380,500	-		AO353_29360	0.13	-0.5
6,380,500	-		AO353_29360	0.13	+0.3
6,380,500	-		AO353_29360	0.13	-0.4
6,380,500	-		AO353_29360	0.13	+0.5
6,380,591	+		AO353_29360	0.34	+0.8
6,380,591	+		AO353_29360	0.34	-1.7
6,380,591	+		AO353_29360	0.34	-1.1
6,380,591	+		AO353_29360	0.34	-1.2
6,380,591	+		AO353_29360	0.34	-0.0
6,380,591	+		AO353_29360	0.34	+1.4
6,380,592	-		AO353_29360	0.34	+0.7
6,380,592	-		AO353_29360	0.34	-1.0
6,380,592	-		AO353_29360	0.34	+1.3
6,380,592	-		AO353_29360	0.34	+0.0
6,380,617	+		AO353_29360	0.39	+1.2
6,380,618	-		AO353_29360	0.40	+0.5
6,380,618	-		AO353_29360	0.40	-1.2
6,380,676	+		AO353_29360	0.53	+0.1
6,380,676	+		AO353_29360	0.53	-0.5
6,380,677	-		AO353_29360	0.53	-0.3
6,380,677	-		AO353_29360	0.53	-0.7
6,380,677	-		AO353_29360	0.53	+0.3
6,380,677	-		AO353_29360	0.53	+2.6
6,380,677	-		AO353_29360	0.53	-0.1
6,380,733	+		AO353_29360	0.66	-0.5
6,380,733	+		AO353_29360	0.66	+1.7
6,380,733	+		AO353_29360	0.66	+0.5
6,380,733	+		AO353_29360	0.66	+0.3
6,380,733	+		AO353_29360	0.66	-0.2
6,380,733	+		AO353_29360	0.66	+0.5
6,380,733	+		AO353_29360	0.66	+0.8
6,380,734	-		AO353_29360	0.66	+0.6
6,380,734	-		AO353_29360	0.66	+0.1
6,380,866	+				-0.2
6,380,866	+				+0.2
6,380,866	+				-1.4
6,380,866	+				+0.2
6,380,866	+				-0.0
6,380,866	+				-1.7
6,380,867	-				+0.7
6,380,867	-				+1.8
6,380,867	-				-0.3
6,380,867	-				+0.9
6,380,867	-				-0.1
6,380,867	-				-1.8
6,380,881	+				+0.2
6,380,969	+				-1.0
6,380,969	+				-0.0
6,380,969	+				-1.6
6,380,970	-				+1.1
6,380,970	-				-0.3
6,380,970	-				+2.1
6,381,005	+				-0.2
6,381,005	+				-0.5
6,381,005	+				+0.7
6,381,006	-				-1.7
6,381,037	+				+0.0
6,381,037	+				+0.1
6,381,037	+				+1.2
6,381,037	+				+0.3
6,381,037	+				-0.3
6,381,037	+				+0.7
6,381,037	+				-0.6
6,381,037	+				-0.0
6,381,037	+				-0.5
6,381,037	+				+0.8
6,381,037	+				-0.0
6,381,038	-				-1.6
6,381,038	-				-0.5
6,381,038	-				-0.8
6,381,038	-				+1.2
6,381,038	-				-0.6
6,381,038	-				-0.6
6,381,038	-				-0.8
6,381,038	-				+1.1
6,381,038	-				+0.9
6,381,038	-				+1.8
6,381,038	-				-0.8
6,381,038	-				+0.5
6,381,038	-				-0.9
6,381,040	-				-0.1
6,381,058	-				-0.0
6,381,135	-				+1.4
6,381,135	-				-3.3
6,381,135	-				-0.3
6,381,135	-				+2.3
6,381,135	-				-1.3
6,381,135	-				+0.5
6,381,193	-		AO353_29365	0.18	-1.0
6,381,193	-		AO353_29365	0.18	-1.0
6,381,203	+		AO353_29365	0.20	-1.0
6,381,203	+		AO353_29365	0.20	-0.0
6,381,204	-		AO353_29365	0.20	-1.0
6,381,204	-		AO353_29365	0.20	+0.6
6,381,678	+				-1.8
6,381,678	+				-0.6
6,381,678	+				-0.0
6,381,678	+				+0.4
6,381,832	+		AO353_29370	0.24	-0.8
6,381,832	+		AO353_29370	0.24	-0.8
6,381,856	+		AO353_29370	0.27	+0.7
6,381,856	+		AO353_29370	0.27	-0.9
6,381,856	+		AO353_29370	0.27	+0.5
6,381,856	+		AO353_29370	0.27	-0.5
6,381,856	+		AO353_29370	0.27	+0.8
6,381,856	+		AO353_29370	0.27	+1.8
6,381,856	+		AO353_29370	0.27	-0.3
6,381,856	+		AO353_29370	0.27	-0.0
6,381,857	-		AO353_29370	0.28	-1.5
6,381,857	-		AO353_29370	0.28	-0.3
6,381,993	+		AO353_29370	0.49	+0.1
6,381,993	+		AO353_29370	0.49	-0.3
6,381,993	+		AO353_29370	0.49	-0.5
6,381,993	+		AO353_29370	0.49	+0.4
6,381,993	+		AO353_29370	0.49	+0.2
6,382,046	+		AO353_29370	0.57	+0.1
6,382,046	+		AO353_29370	0.57	+0.1
6,382,046	+		AO353_29370	0.57	+1.5
6,382,047	-		AO353_29370	0.57	-0.5
6,382,047	-		AO353_29370	0.57	-0.6
6,382,047	-		AO353_29370	0.57	+0.4
6,382,047	-		AO353_29370	0.57	-2.0
6,382,047	-		AO353_29370	0.57	+0.3
6,382,383	+				-2.2
6,382,440	+				+0.2
6,382,440	+				+0.1
6,382,440	+				-0.0
6,382,440	+				-0.5
6,382,440	+				+1.1
6,382,440	+				-1.5
6,382,440	+				-1.6
6,382,441	-				-0.3
6,382,441	-				+0.8
6,382,441	-				+1.5
6,382,441	-				+0.3
6,382,441	-				-1.3