Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29350

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
6,375,953	+				-0.0
6,375,953	+				-0.2
6,376,046	+				+2.2
6,376,046	+				+0.5
6,376,080	-				-0.8
6,376,113	+				-0.5
6,376,113	+				-0.0
6,376,113	+				-0.6
6,376,113	+				-1.3
6,376,114	-				+0.0
6,376,114	-				+1.0
6,376,262	-		AO353_29345	0.19	-1.3
6,376,262	-		AO353_29345	0.19	-1.0
6,376,262	-		AO353_29345	0.19	-1.6
6,376,262	-		AO353_29345	0.19	-0.2
6,376,415	-		AO353_29345	0.37	-1.0
6,376,415	-		AO353_29345	0.37	-0.3
6,376,415	-		AO353_29345	0.37	+0.8
6,376,415	-		AO353_29345	0.37	+0.5
6,376,426	+		AO353_29345	0.39	+0.1
6,376,426	+		AO353_29345	0.39	+0.3
6,376,426	+		AO353_29345	0.39	-0.0
6,376,426	+		AO353_29345	0.39	+0.3
6,376,426	+		AO353_29345	0.39	-1.0
6,376,427	-		AO353_29345	0.39	+0.3
6,376,588	+		AO353_29345	0.58	-1.0
6,376,588	+		AO353_29345	0.58	+0.2
6,376,588	+		AO353_29345	0.58	+0.2
6,376,588	+		AO353_29345	0.58	-0.1
6,376,588	+		AO353_29345	0.58	-0.0
6,376,588	+		AO353_29345	0.58	+0.4
6,376,588	+		AO353_29345	0.58	-1.0
6,376,589	-		AO353_29345	0.59	-0.6
6,376,589	-		AO353_29345	0.59	-0.2
6,376,589	-		AO353_29345	0.59	-2.0
6,376,663	+		AO353_29345	0.68	+1.5
6,376,663	+		AO353_29345	0.68	+0.2
6,376,663	+		AO353_29345	0.68	-1.0
6,376,663	+		AO353_29345	0.68	-1.0
6,376,663	+		AO353_29345	0.68	+0.9
6,376,663	+		AO353_29345	0.68	-1.1
6,376,663	+		AO353_29345	0.68	+0.5
6,376,664	-		AO353_29345	0.68	-1.3
6,376,664	-		AO353_29345	0.68	-0.4
6,376,664	-		AO353_29345	0.68	-1.2
6,376,664	-		AO353_29345	0.68	-0.2
6,376,664	-		AO353_29345	0.68	+0.3
6,376,664	-		AO353_29345	0.68	+0.9
6,376,731	+		AO353_29345	0.76	+0.2
6,376,934	+				+1.3
6,376,934	+				+0.4
6,376,935	-				+0.8
6,376,935	-				-1.2
6,377,030	+				+0.8
6,377,030	+				-0.0
6,377,030	+				+0.2
6,377,031	-				-0.0
6,377,031	-				+0.1
6,377,039	+				-0.3
6,377,040	-				+0.1
6,377,096	+				+1.7
6,377,096	+				-1.4
6,377,096	+				+1.6
6,377,096	+				-0.4
6,377,096	+				+0.1
6,377,096	+				+0.7
6,377,096	+				-1.8
6,377,097	-				-0.2
6,377,097	-				+0.5
6,377,097	-				-1.3
6,377,097	-				-1.3
6,377,097	-				-1.5
6,377,097	-				-0.5
6,377,097	-				-0.2
6,377,121	-				-0.3
6,377,121	-				-0.6
6,377,121	-				+0.1
6,377,121	-				-0.8
6,377,150	+				-0.7
6,377,150	+				+0.0
6,377,150	+				+1.0
6,377,150	+				+0.3
6,377,151	-				-0.7
6,377,151	-				+0.3
6,377,188	+		AO353_29350	0.11	+1.2
6,377,189	-		AO353_29350	0.11	-1.0
6,377,201	+		AO353_29350	0.11	-0.3
6,377,201	+		AO353_29350	0.11	-0.5
6,377,202	-		AO353_29350	0.11	+2.7
6,377,234	+		AO353_29350	0.13	-0.0
6,377,235	-		AO353_29350	0.13	+0.5
6,377,235	-		AO353_29350	0.13	-0.8
6,377,291	+		AO353_29350	0.15	-1.5
6,377,291	+		AO353_29350	0.15	-0.7
6,377,292	-		AO353_29350	0.15	+0.3
6,377,328	-		AO353_29350	0.17	+1.4
6,377,393	+		AO353_29350	0.19	-1.0
6,377,393	+		AO353_29350	0.19	+0.3
6,377,394	-		AO353_29350	0.19	+0.9
6,377,438	+		AO353_29350	0.21	+0.9
6,377,576	+		AO353_29350	0.27	-0.7
6,377,577	-		AO353_29350	0.27	+0.7
6,377,577	-		AO353_29350	0.27	+0.1
6,377,577	-		AO353_29350	0.27	+0.7
6,377,577	-		AO353_29350	0.27	-1.2
6,377,577	-		AO353_29350	0.27	-0.5
6,377,663	+		AO353_29350	0.31	+0.5
6,377,663	+		AO353_29350	0.31	+0.5
6,377,792	+		AO353_29350	0.36	+1.3
6,377,792	+		AO353_29350	0.36	-0.2
6,377,793	-		AO353_29350	0.36	+0.3
6,377,793	-		AO353_29350	0.36	+0.5
6,377,793	-		AO353_29350	0.36	+0.5
6,377,872	+		AO353_29350	0.40	+0.1
6,377,873	-		AO353_29350	0.40	-1.5
6,378,033	-		AO353_29350	0.46	-0.2
6,378,033	-		AO353_29350	0.46	+0.8
6,378,033	-		AO353_29350	0.46	+0.2
6,378,033	-		AO353_29350	0.46	-0.6
6,378,056	+		AO353_29350	0.47	-0.1
6,378,056	+		AO353_29350	0.47	-0.8
6,378,056	+		AO353_29350	0.47	-1.3
6,378,056	+		AO353_29350	0.47	+0.7
6,378,057	-		AO353_29350	0.47	+0.2
6,378,057	-		AO353_29350	0.47	-0.3
6,378,057	-		AO353_29350	0.47	-0.2
6,378,161	+		AO353_29350	0.52	-0.0
6,378,161	+		AO353_29350	0.52	+0.1
6,378,161	+		AO353_29350	0.52	-0.3
6,378,161	+		AO353_29350	0.52	-0.3
6,378,161	+		AO353_29350	0.52	+0.4
6,378,161	+		AO353_29350	0.52	+3.4
6,378,161	+		AO353_29350	0.52	+0.2
6,378,161	+		AO353_29350	0.52	-0.0
6,378,161	+		AO353_29350	0.52	-0.5
6,378,161	+		AO353_29350	0.52	-1.1
6,378,161	+		AO353_29350	0.52	+0.8
6,378,161	+		AO353_29350	0.52	-1.2
6,378,161	+		AO353_29350	0.52	+1.1
6,378,162	-		AO353_29350	0.52	+2.1
6,378,162	-		AO353_29350	0.52	+2.5
6,378,162	-		AO353_29350	0.52	+0.3
6,378,162	-		AO353_29350	0.52	-0.6
6,378,162	-		AO353_29350	0.52	+0.2
6,378,162	-		AO353_29350	0.52	+1.0
6,378,209	-		AO353_29350	0.54	-0.8
6,378,299	+		AO353_29350	0.58	-1.7
6,378,299	+		AO353_29350	0.58	+0.4
6,378,300	-		AO353_29350	0.58	-0.8
6,378,300	-		AO353_29350	0.58	-1.4
6,378,360	-		AO353_29350	0.60	+1.4
6,378,378	+		AO353_29350	0.61	-0.8
6,378,378	+		AO353_29350	0.61	+1.3
6,378,379	-		AO353_29350	0.61	-0.0
6,378,701	+		AO353_29350	0.75	-0.3
6,378,702	-		AO353_29350	0.75	+0.1
6,378,755	+		AO353_29350	0.77	-2.2
6,378,755	+		AO353_29350	0.77	-0.5
6,378,755	+				+1.5
6,378,756	-		AO353_29350	0.77	+0.6
6,378,756	-		AO353_29350	0.77	+1.3
6,378,756	-		AO353_29350	0.77	-0.5
6,378,756	-		AO353_29350	0.77	-0.0
6,378,756	-		AO353_29350	0.77	+0.5
6,378,756	-		AO353_29350	0.77	-0.3
6,378,756	-		AO353_29350	0.77	+0.5
6,378,756	-		AO353_29350	0.77	+0.4
6,378,756	-		AO353_29350	0.77	+0.7
6,378,756	-		AO353_29350	0.77	+1.0
6,378,756	-		AO353_29350	0.77	+0.2
6,378,794	+		AO353_29350	0.79	-1.3
6,378,795	-		AO353_29350	0.79	-0.9
6,378,795	-		AO353_29350	0.79	-0.0
6,378,953	+		AO353_29350	0.85	-0.4
6,378,953	+		AO353_29350	0.85	-0.1
6,378,954	-		AO353_29350	0.85	-0.5
6,379,049	+		AO353_29350	0.89	+1.5
6,379,049	+		AO353_29350	0.89	-0.7
6,379,050	-		AO353_29350	0.89	-1.3
6,379,050	-		AO353_29350	0.89	+0.3
6,379,050	-		AO353_29350	0.89	+1.3
6,379,050	-		AO353_29350	0.89	+1.0
6,379,288	+				+0.2
6,379,288	+				+0.3
6,379,289	-				+0.0
6,379,289	-				-0.3
6,379,315	+				+0.7
6,379,316	-				+0.1
6,379,316	-				+0.2
6,379,316	-				+1.1
6,379,316	-				-0.4
6,379,333	+				+0.4
6,379,333	+				-2.4
6,379,333	+				+0.6
6,379,334	-				+1.2
6,379,385	+				-0.6
6,379,385	+				+0.1
6,379,386	-				-1.5
6,379,386	-				-0.8
6,379,386	-				+1.3
6,379,421	-				-0.2
6,379,428	+				-0.8
6,379,445	+				-1.4
6,379,446	-				-0.9
6,379,571	+				+0.7
6,379,571	+				-1.0
6,379,572	-				-0.8
6,379,620	+				+0.5
6,379,620	+				-1.3
6,379,621	-				-0.1
6,379,621	-				-0.8
6,379,621	-				+0.4
6,379,621	-				-1.6
6,379,621	-				+0.7
6,379,676	+				-0.5
6,379,676	+				+1.5
6,379,676	+				+1.3
6,379,677	-				+1.5
6,379,677	-				+3.0
6,379,677	-				+0.9
6,379,677	-				+0.7
6,379,677	-				+1.0
6,379,726	+				-1.0
6,379,754	+				-0.5
6,379,755	-				+0.7
6,379,755	-				-0.1
6,379,755	-				-1.3
6,379,755	-				-0.5
6,379,826	-				+0.4
6,379,826	-				-0.5
6,379,833	+				-0.5
6,379,833	+				-0.9
6,379,855	-				-0.1
6,379,866	+				-0.8
6,379,866	+				-1.6
6,379,866	+				+0.5
6,379,866	+				-0.4
6,379,867	-				+2.5
6,379,867	-				-0.3
6,379,867	-				-0.7
6,379,867	-				-0.8
6,379,895	+				-0.0
6,379,895	+				-0.0
6,379,896	-				-0.8
6,379,896	-				-0.0
6,379,896	-				+0.2
6,379,896	-				+0.1
6,379,923	+				+0.1
6,379,924	-				+0.8
6,380,010	+		AO353_29355	0.33	+0.5
6,380,089	+		AO353_29355	0.57	+0.7
6,380,089	+		AO353_29355	0.57	-0.0
6,380,089	+		AO353_29355	0.57	-0.7
6,380,089	+		AO353_29355	0.57	+0.4
6,380,089	+		AO353_29355	0.57	+0.2
6,380,107	+		AO353_29355	0.63	+0.5
6,380,107	+		AO353_29355	0.63	-0.3
6,380,108	-		AO353_29355	0.63	-0.5
6,380,108	-		AO353_29355	0.63	+2.0