Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28185

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
6,143,994	-		AO353_28175	0.86	+1.1
6,144,035	+		AO353_28175	0.89	-0.5
6,144,036	-		AO353_28175	0.89	+1.0
6,144,036	-		AO353_28175	0.89	+0.1
6,144,093	+				-0.7
6,144,166	-				+1.1
6,144,179	+				-0.9
6,144,179	+				+0.8
6,144,180	-				+0.2
6,144,180	-				-0.6
6,144,227	+				+0.0
6,144,228	-				+0.9
6,144,228	-				+0.4
6,144,277	+				+1.4
6,144,277	+				-2.1
6,144,278	-				+1.5
6,144,278	-				-1.3
6,144,310	-				+0.1
6,144,351	+				-0.2
6,144,351	+				-0.1
6,144,351	+				+1.4
6,144,352	-				+0.7
6,144,352	-				+1.1
6,144,394	-				-1.5
6,144,394	-				-0.5
6,144,471	+				-0.7
6,144,471	+				-0.2
6,144,471	+				-1.3
6,144,472	-				+0.8
6,144,472	-				+1.9
6,144,557	+				-0.1
6,144,558	-				+1.9
6,144,558	-				+0.1
6,144,681	+				-2.1
6,144,869	+				+0.9
6,144,869	+				-0.6
6,144,869	+				-1.8
6,144,870	-				+1.2
6,144,870	-				-2.1
6,144,909	-				-0.5
6,144,970	+				-0.6
6,144,971	-				-1.3
6,144,971	-				-1.5
6,144,971	-				+1.4
6,144,997	+				+3.1
6,144,997	+				+0.8
6,144,998	-				-0.5
6,144,998	-				+0.5
6,144,998	-				-0.8
6,145,027	+				-0.6
6,145,126	-		AO353_28185	0.24	-0.7
6,145,126	-		AO353_28185	0.24	-1.1
6,145,126	-		AO353_28185	0.24	-2.2
6,145,186	+		AO353_28185	0.33	+0.3
6,145,186	+		AO353_28185	0.33	-1.3
6,145,187	-		AO353_28185	0.33	-0.7
6,145,187	-		AO353_28185	0.33	-1.0
6,145,300	+		AO353_28185	0.51	-1.6
6,145,300	+		AO353_28185	0.51	+1.5
6,145,301	-		AO353_28185	0.51	-0.8
6,145,301	-		AO353_28185	0.51	+0.5
6,145,426	-		AO353_28185	0.70	+0.4
6,145,469	+		AO353_28185	0.76	-1.8
6,145,469	+		AO353_28185	0.76	+0.7
6,145,469	+		AO353_28185	0.76	-1.1
6,145,470	-		AO353_28185	0.77	-0.7
6,145,470	-		AO353_28185	0.77	-1.1
6,145,470	-		AO353_28185	0.77	-0.6
6,145,470	-		AO353_28185	0.77	+1.3
6,145,470	-		AO353_28185	0.77	+0.3
6,145,470	-		AO353_28185	0.77	+0.9
6,145,470	-		AO353_28185	0.77	-1.5
6,145,470	-		AO353_28185	0.77	+0.8
6,145,470	-		AO353_28185	0.77	-2.4
6,145,471	+		AO353_28185	0.77	+0.2
6,145,471	+		AO353_28185	0.77	-2.1
6,145,484	+		AO353_28185	0.79	-0.1
6,145,485	-		AO353_28185	0.79	+0.2
6,145,485	-		AO353_28185	0.79	+0.6
6,145,485	-		AO353_28185	0.79	-1.7
6,145,485	-		AO353_28185	0.79	-0.1
6,145,487	+		AO353_28185	0.79	+0.1
6,145,487	+		AO353_28185	0.79	-0.3
6,145,487	+		AO353_28185	0.79	+0.9
6,145,487	+		AO353_28185	0.79	-0.2
6,145,488	-		AO353_28185	0.79	-0.3
6,145,488	-		AO353_28185	0.79	-0.8
6,145,575	-				-1.8
6,145,635	+				+0.8
6,145,635	+				-0.8
6,145,724	+				-2.4
6,145,724	+				-0.4
6,145,724	+				+1.1
6,145,725	-				-1.1
6,145,725	-				-0.4
6,145,725	-				+0.6
6,145,725	-				+0.5
6,145,733	+				+0.1
6,145,733	+				+0.5
6,145,734	-				-0.6
6,145,734	-				-0.8
6,145,734	-				+1.5
6,145,734	-				+0.6
6,145,829	+				-1.7
6,145,830	-				-0.4
6,145,836	+				-0.1
6,145,836	+				-1.1
6,145,836	+				-1.3
6,145,836	+				+0.2
6,145,836	+				-0.5
6,145,836	+				+0.8
6,145,836	+				-1.1
6,145,836	+				+0.5
6,145,836	+				+1.1
6,145,836	+				-1.8
6,145,836	+				+0.1
6,145,836	+				+1.3
6,145,836	+				+0.1
6,145,836	+				+0.9
6,145,836	+				+0.1
6,145,837	-				-0.8
6,145,837	-				-0.3
6,145,837	-				+0.2
6,145,837	-				+0.8
6,145,837	-				+0.2
6,145,837	-				+0.5
6,145,837	-				+1.1
6,145,837	-				-1.3
6,145,837	-				-0.2
6,145,837	-				-0.3
6,145,839	-				-0.3
6,145,839	-				-1.3
6,145,952	+		AO353_28190	0.17	-0.3
6,145,952	+		AO353_28190	0.17	+0.1
6,145,952	+		AO353_28190	0.17	+1.5
6,145,952	+		AO353_28190	0.17	+0.8
6,145,952	+		AO353_28190	0.17	-0.8
6,145,952	+		AO353_28190	0.17	-0.5
6,145,952	+		AO353_28190	0.17	-0.1
6,145,952	+		AO353_28190	0.17	-1.6
6,145,952	+		AO353_28190	0.17	+0.2
6,145,952	+		AO353_28190	0.17	-0.1
6,145,953	-		AO353_28190	0.17	-1.5
6,145,953	-		AO353_28190	0.17	+0.9
6,145,953	-		AO353_28190	0.17	-1.1
6,145,953	-		AO353_28190	0.17	-0.2
6,145,953	-		AO353_28190	0.17	-0.8
6,145,953	-		AO353_28190	0.17	+0.2
6,145,953	-		AO353_28190	0.17	+1.7
6,145,953	-		AO353_28190	0.17	-1.5
6,145,953	-		AO353_28190	0.17	+1.8
6,145,953	-		AO353_28190	0.17	+0.8
6,145,953	-		AO353_28190	0.17	-0.9
6,145,955	+		AO353_28190	0.17	-1.4
6,145,955	+		AO353_28190	0.17	-0.6
6,145,955	+		AO353_28190	0.17	-0.1
6,145,956	-		AO353_28190	0.17	+1.8
6,146,024	+		AO353_28190	0.24	+0.9
6,146,130	+		AO353_28190	0.35	+0.5
6,146,197	+		AO353_28190	0.42	-0.5
6,146,197	+		AO353_28190	0.42	+0.5
6,146,198	-		AO353_28190	0.42	+2.3
6,146,198	-		AO353_28190	0.42	-1.9