Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26835

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
5,877,223	+		AO353_26830	0.32	+0.7
5,877,224	-		AO353_26830	0.32	+1.5
5,877,232	+		AO353_26830	0.33	-1.7
5,877,334	+		AO353_26830	0.41	+1.2
5,877,334	+		AO353_26830	0.41	+1.9
5,877,335	-		AO353_26830	0.41	+2.2
5,877,335	-		AO353_26830	0.41	+1.1
5,877,335	-		AO353_26830	0.41	+0.2
5,877,674	+		AO353_26830	0.67	+2.0
5,877,674	+		AO353_26830	0.67	+0.2
5,877,675	-		AO353_26830	0.67	+2.0
5,877,690	+		AO353_26830	0.68	+0.6
5,877,691	-		AO353_26830	0.68	+0.5
5,877,691	-		AO353_26830	0.68	+1.5
5,877,993	+				+0.3
5,877,993	+				+2.5
5,877,994	-				+2.3
5,878,044	+				+1.0
5,878,044	+				+3.1
5,878,044	+				+1.4
5,878,044	+				+1.3
5,878,045	-				+1.9
5,878,045	-				+1.2
5,878,057	+				+2.5
5,878,080	+				+2.4
5,878,291	+		AO353_26835	0.26	+0.2
5,878,291	+		AO353_26835	0.26	-0.7
5,878,292	-		AO353_26835	0.26	+1.2
5,878,292	-		AO353_26835	0.26	-1.5
5,878,331	+		AO353_26835	0.32	-1.1
5,878,332	-		AO353_26835	0.32	-1.7
5,878,332	-		AO353_26835	0.32	+0.3
5,878,514	+		AO353_26835	0.58	-0.8
5,878,515	-		AO353_26835	0.58	-1.1
5,878,895	-				+1.5
5,878,911	+				-0.8
5,878,917	+				-0.3
5,878,917	+				-0.9
5,878,918	-				-0.6
5,878,918	-				+0.7
5,878,918	-				-0.5
5,878,964	+				+0.2
5,878,964	+				-1.8
5,878,964	+				-1.8
5,878,964	+				-1.2
5,878,966	+				-0.1
5,878,966	+				-2.4
5,878,966	+				+0.3
5,878,966	+				+1.5
5,878,966	+				-1.1
5,878,967	-				+0.9
5,878,967	-				-0.8
5,878,967	-				+0.0
5,878,967	-				+0.3
5,878,967	-				+1.6
5,878,967	-				+0.7
5,878,967	-				+0.3
5,878,967	-				+0.6
5,878,967	-				+1.0
5,878,967	-				-0.1
5,878,967	-				+1.5
5,878,988	+				-1.5
5,878,988	+				-0.3
5,878,989	-				-1.4
5,878,989	-				-1.1
5,878,997	+				-0.2
5,878,997	+				+0.8
5,879,018	+				+0.3
5,879,018	+				-1.5
5,879,018	+				-0.1
5,879,019	-				-0.2
5,879,019	-				+0.1
5,879,019	-				+0.2
5,879,019	-				+1.7
5,879,054	-				-0.5
5,879,078	+				-1.0
5,879,078	+				+0.7
5,879,079	-				-1.7
5,879,082	+				+0.1
5,879,082	+				+0.0
5,879,082	+				-1.3
5,879,082	+				-0.1
5,879,082	+				+0.1
5,879,082	+				-0.0
5,879,082	+				-1.3
5,879,082	+				+0.7
5,879,082	+				-0.3
5,879,082	+				-1.1
5,879,082	+				-1.1
5,879,082	+				-1.3
5,879,082	+				+0.7
5,879,082	+				-0.5
5,879,082	+				-0.7
5,879,082	+				-1.5
5,879,083	-				+1.9
5,879,083	-				+1.2
5,879,083	-				-1.8
5,879,083	-				-1.1
5,879,083	-				-1.1
5,879,083	-				+0.1
5,879,083	-				-0.5
5,879,083	-				-2.0
5,879,083	-				-0.3
5,879,083	-				-0.5
5,879,083	-				+0.7
5,879,083	-				+1.2
5,879,083	-				+0.1
5,879,083	-				-1.1
5,879,083	-				-1.2
5,879,083	-				+0.9
5,879,083	-				+0.9
5,879,083	-				+1.0
5,879,499	+		AO353_26840	0.36	+0.2
5,879,500	-		AO353_26840	0.36	-1.6