Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26115

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
5,747,400	+		AO353_26105	0.88	-0.7
5,747,400	+		AO353_26105	0.88	+0.3
5,747,401	-		AO353_26105	0.88	+0.2
5,747,472	-				+0.8
5,747,472	-				+0.3
5,747,486	+				+0.3
5,747,611	+		AO353_26110	0.27	+0.2
5,747,612	-		AO353_26110	0.27	-0.8
5,747,612	-		AO353_26110	0.27	+1.4
5,747,612	-		AO353_26110	0.27	-1.4
5,747,623	+		AO353_26110	0.31	+0.3
5,747,623	+		AO353_26110	0.31	-0.6
5,747,623	+		AO353_26110	0.31	-0.3
5,747,624	-		AO353_26110	0.31	+1.2
5,747,624	-		AO353_26110	0.31	+0.4
5,747,624	-		AO353_26110	0.31	+0.9
5,747,705	-		AO353_26110	0.54	-1.4
5,747,765	-		AO353_26110	0.70	-0.4
5,747,765	-		AO353_26110	0.70	-2.6
5,747,824	+		AO353_26110	0.87	+0.4
5,747,824	+		AO353_26110	0.87	+0.1
5,747,824	+		AO353_26110	0.87	+0.7
5,747,825	-		AO353_26110	0.87	-0.1
5,747,825	-		AO353_26110	0.87	+1.0
5,747,848	-				+0.6
5,747,848	-				-0.6
5,747,848	-				-1.0
5,748,343	-		AO353_26115	0.20	-0.8
5,748,343	-		AO353_26115	0.20	-0.8
5,748,343	-		AO353_26115	0.20	-1.9
5,748,343	-		AO353_26115	0.20	+1.4
5,748,343	-		AO353_26115	0.20	-0.7
5,748,851	+		AO353_26120	0.24	-0.8
5,748,851	+		AO353_26120	0.24	+1.4
5,748,851	+		AO353_26120	0.24	+0.3
5,748,851	+		AO353_26120	0.24	-0.3
5,748,851	+		AO353_26120	0.24	-0.2
5,748,851	+		AO353_26120	0.24	+0.2
5,748,851	+		AO353_26120	0.24	+0.2
5,748,855	+		AO353_26120	0.25	-0.2
5,748,855	+		AO353_26120	0.25	-1.2
5,748,855	+		AO353_26120	0.25	-0.4
5,748,855	+		AO353_26120	0.25	-0.7
5,748,855	+		AO353_26120	0.25	-0.4
5,748,889	-		AO353_26120	0.30	-1.2
5,748,892	-		AO353_26120	0.30	-1.2
5,748,892	-		AO353_26120	0.30	+0.5
5,748,892	-		AO353_26120	0.30	+0.4
5,748,892	-		AO353_26120	0.30	-1.8
5,748,892	-		AO353_26120	0.30	-0.1
5,748,892	-				-0.9
5,748,892	-		AO353_26120	0.30	-1.4
5,748,892	-		AO353_26120	0.30	-0.9
5,748,892	-		AO353_26120	0.30	-2.4
5,749,013	+		AO353_26120	0.48	+1.0
5,749,237	-		AO353_26120	0.81	+0.3
5,749,237	-		AO353_26120	0.81	+0.1
5,749,237	-		AO353_26120	0.81	+0.1
5,749,237	-		AO353_26120	0.81	+1.7
5,749,308	+				+1.2
5,749,309	-				-0.7
5,749,360	-				+0.7
5,749,360	-				+1.1
5,749,442	+		AO353_26125	0.24	-0.9
5,749,442	+		AO353_26125	0.24	+0.3
5,749,500	-		AO353_26125	0.43	-0.6
5,749,500	-		AO353_26125	0.43	+0.6
5,749,534	-		AO353_26125	0.54	-0.3
5,749,543	+		AO353_26125	0.57	+1.2
5,749,586	-		AO353_26125	0.71	-0.7