Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25990

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
5,726,133	-		AO353_25980	0.17	-1.8
5,726,403	+				-0.2
5,726,404	-		AO353_25980	0.71	+0.3
5,726,404	-		AO353_25980	0.71	-0.9
5,726,404	-		AO353_25980	0.71	+1.4
5,726,411	+		AO353_25980	0.72	-1.3
5,726,411	+		AO353_25980	0.72	+0.3
5,726,445	+		AO353_25980	0.79	+1.1
5,726,445	+		AO353_25980	0.79	-1.2
5,726,448	+		AO353_25980	0.80	-0.9
5,726,448	+		AO353_25980	0.80	-1.4
5,726,448	+		AO353_25980	0.80	-1.4
5,726,448	+		AO353_25980	0.80	-0.6
5,726,449	-		AO353_25980	0.80	-1.2
5,726,449	-		AO353_25980	0.80	+0.4
5,726,449	-		AO353_25980	0.80	-2.0
5,726,449	-		AO353_25980	0.80	-1.2
5,726,449	-		AO353_25980	0.80	-1.0
5,726,547	+				+1.0
5,726,547	+				+1.1
5,726,548	-				+0.7
5,726,590	+		AO353_25985	0.12	-0.5
5,726,591	-		AO353_25985	0.13	+0.0
5,726,592	+		AO353_25985	0.13	+0.4
5,726,593	-		AO353_25985	0.13	+0.4
5,726,593	-		AO353_25985	0.13	+0.2
5,726,593	-		AO353_25985	0.13	-0.5
5,726,766	+		AO353_25985	0.59	-1.2
5,726,766	+		AO353_25985	0.59	-1.0
5,726,767	-		AO353_25985	0.59	+0.3
5,726,767	-		AO353_25985	0.59	-0.9
5,726,937	+				+0.4
5,726,937	+				-0.5
5,726,937	+				-0.9
5,726,937	+				-0.4
5,726,937	+				+0.3
5,726,938	-				+0.2
5,726,947	+				+1.4
5,726,947	+				+1.4
5,726,994	+				+0.7
5,726,994	+				-0.2
5,726,994	+				-0.4
5,726,994	+				+0.4
5,726,994	+				-1.6
5,726,994	+				-0.5
5,726,994	+				+1.8
5,726,994	+				+0.5
5,726,995	-				-2.3
5,726,995	-				-0.7
5,726,997	+				+1.0
5,726,997	+				+0.2
5,726,997	+				-1.4
5,726,997	+				-2.7
5,726,997	+				-1.0
5,726,998	-				+1.8
5,726,998	-				-1.4
5,726,998	-				+1.2
5,727,029	+				-0.4
5,727,029	+				-2.8
5,727,030	-				-2.8
5,727,030	-				+0.7
5,727,030	-				-0.9
5,727,102	+				-2.4
5,727,102	+				-1.7
5,727,148	+				-2.8
5,727,149	-				+0.8
5,727,149	-				+0.2
5,727,149	-				-1.9
5,727,149	-				-1.6
5,727,225	+		AO353_25990	0.15	-1.6
5,727,226	-		AO353_25990	0.15	+0.1
5,727,226	-				+1.4
5,727,319	+		AO353_25990	0.25	-1.2
5,727,320	-		AO353_25990	0.25	+0.2
5,727,394	+		AO353_25990	0.33	-2.8
5,727,394	+		AO353_25990	0.33	-1.6
5,727,394	+		AO353_25990	0.33	-0.6
5,727,395	-		AO353_25990	0.34	-1.9
5,727,395	-		AO353_25990	0.34	-0.2
5,727,395	-		AO353_25990	0.34	-1.8
5,727,395	-		AO353_25990	0.34	+0.4
5,727,460	+		AO353_25990	0.41	+0.6
5,727,461	-		AO353_25990	0.41	-2.4
5,727,461	-		AO353_25990	0.41	-0.2
5,727,461	-		AO353_25990	0.41	-2.4
5,727,499	+		AO353_25990	0.45	-1.8
5,727,506	-		AO353_25990	0.46	-0.8
5,727,597	+		AO353_25990	0.56	-0.4
5,727,597	+		AO353_25990	0.56	-0.2
5,727,598	-		AO353_25990	0.56	-0.4
5,727,612	-		AO353_25990	0.58	+1.0
5,727,653	-		AO353_25990	0.62	-2.4
5,727,664	+		AO353_25990	0.63	-2.7
5,727,664	+		AO353_25990	0.63	-1.2
5,727,664	+		AO353_25990	0.63	-2.4
5,727,665	-		AO353_25990	0.64	-0.2
5,727,830	-		AO353_25990	0.82	-2.6
5,727,860	-		AO353_25990	0.85	-1.4
5,727,860	-		AO353_25990	0.85	-0.8
5,727,939	+				-0.6
5,727,939	+				-1.6
5,727,939	+				-0.4
5,727,939	+				-1.4
5,727,939	+				-0.6
5,727,939	+				-1.4
5,727,939	+				-2.2
5,727,940	-				-0.2
5,727,940	-				+1.4
5,727,940	-				-0.2
5,727,940	-				-2.5
5,727,940	-				-0.2
5,727,949	+				-0.9
5,727,949	+				-1.6
5,727,949	+				-1.9
5,727,950	-				-0.2
5,727,961	-				-1.4
5,727,967	+				-1.9
5,728,018	+				-0.6
5,728,018	+				-1.8
5,728,018	+				-1.6
5,728,018	+				-2.2
5,728,018	+				+1.4
5,728,018	+				+0.7
5,728,018	+				-0.3
5,728,019	-				-0.0
5,728,019	-				-1.7
5,728,019	-				-1.8
5,728,019	-				-1.6
5,728,019	-				-3.4
5,728,019	-				-0.9
5,728,019	-				-1.4
5,728,111	+				-3.0
5,728,132	+				-1.4
5,728,138	-				-0.5
5,728,143	+				-1.8
5,728,143	+				-0.6
5,728,143	+				+0.4
5,728,143	+				-3.1
5,728,144	-				-1.9
5,728,144	-				+0.7
5,728,144	-				+0.1
5,728,144	-				-2.2
5,728,150	+				-1.1
5,728,166	+				-2.2
5,728,166	+				-0.6
5,728,166	+				+0.6
5,728,166	+				-0.6
5,728,167	-				+0.7
5,728,167	-				+0.1
5,728,167	-				-0.3
5,728,167	-				-0.3
5,728,265	-				+1.7
5,728,270	+				+1.2
5,728,270	+				+0.4
5,728,270	+				-0.1
5,728,270	+				+1.7
5,728,270	+				-1.0
5,728,270	+				-0.2
5,728,270	+				-0.9
5,728,270	+				-2.3
5,728,270	+				-0.6
5,728,270	+				-0.7
5,728,270	+				-1.4
5,728,270	+				-0.0
5,728,270	+				-0.6
5,728,270	+				-1.0
5,728,271	-				+0.7
5,728,271	-				-0.3
5,728,271	-				+0.8
5,728,271	-				+0.4
5,728,271	-				-0.6
5,728,271	-				+0.7
5,728,271	-				-1.2
5,728,291	+				-0.2
5,728,291	+				-0.9
5,728,292	-				+1.1
5,728,452	-				-2.0
5,728,454	+				+1.4
5,728,518	-				-0.1
5,728,518	-				-0.6
5,728,536	-				-0.2
5,728,536	-				-0.7
5,728,551	+				+1.4
5,728,551	+				+1.0
5,728,551	+				+0.1
5,728,552	-				+0.6
5,728,552	-				+0.2
5,728,552	-				+2.4
5,728,552	-				+1.0
5,728,576	+				+0.2
5,728,576	+				-0.3
5,728,576	+				+1.0
5,728,576	+				-0.3
5,728,576	+				-0.2
5,728,577	-				+1.0
5,728,577	-				+0.9
5,728,577	-				+0.8
5,728,577	-				-0.2
5,728,579	-				-0.2
5,728,579	-				-0.9
5,728,607	+				-0.4
5,728,659	+				-0.0
5,728,659	+				+0.6
5,728,659	+				-0.4
5,728,659	+				+0.3
5,728,659	+				+0.3
5,728,659	+				+0.1
5,728,659	+				+0.7
5,728,660	-				+0.4
5,728,660	-				+0.1
5,728,660	-				+0.3
5,728,701	+				-0.9
5,728,702	-				+0.1
5,728,702	-				-1.8
5,728,709	+				-1.9
5,728,709	+				+0.8
5,728,709	+				-1.6
5,728,710	-				+0.7
5,728,710	-				+1.1
5,728,710	-				+1.1
5,728,710	-				+0.3
5,728,710	-				+0.5
5,728,713	+				+0.2
5,728,713	+				-1.2
5,728,713	+				-0.0
5,728,713	+				-0.3
5,728,713	+				-1.4
5,728,713	+				+0.1
5,728,713	+				-1.2
5,728,713	+				-0.6
5,728,713	+				+0.8
5,728,714	-				+0.8
5,728,714	-				-0.2
5,728,714	-				-0.6
5,728,714	-				+0.8
5,728,714	-				+0.4
5,728,714	-				-0.2
5,728,714	-				-0.5
5,728,714	-				+0.2
5,728,714	-				-0.9
5,728,719	+				-0.0
5,728,719	+				+0.7
5,728,719	+				+0.1
5,728,719	+				+1.7
5,728,719	+				+2.0
5,728,719	+				+0.9
5,728,720	-				+1.0
5,728,720	-				-0.4
5,728,720	-				-0.0
5,728,720	-				+1.2
5,728,745	-		AO353_25995	0.10	+1.4
5,728,766	+		AO353_25995	0.12	+0.9
5,728,767	-		AO353_25995	0.12	-0.5
5,728,767	-		AO353_25995	0.12	+0.8
5,728,812	+		AO353_25995	0.15	-1.2
5,728,812	+		AO353_25995	0.15	+0.4
5,728,813	-		AO353_25995	0.15	-0.4
5,728,813	-		AO353_25995	0.15	+1.1
5,728,830	+		AO353_25995	0.16	-0.4
5,728,831	-		AO353_25995	0.16	+1.8
5,728,831	-		AO353_25995	0.16	+0.6
5,728,888	+		AO353_25995	0.20	-0.2
5,728,896	+		AO353_25995	0.21	+0.9
5,728,896	+		AO353_25995	0.21	-0.5
5,728,896	+		AO353_25995	0.21	+2.0
5,728,896	+		AO353_25995	0.21	+1.3
5,728,896	+		AO353_25995	0.21	-1.4
5,728,896	+		AO353_25995	0.21	-1.0
5,728,896	+		AO353_25995	0.21	-0.9
5,728,896	+		AO353_25995	0.21	-1.8
5,728,896	+		AO353_25995	0.21	+0.3
5,728,896	+		AO353_25995	0.21	+1.7
5,728,896	+		AO353_25995	0.21	-0.4
5,728,897	-		AO353_25995	0.21	+2.6
5,728,897	-		AO353_25995	0.21	+0.3
5,728,897	-		AO353_25995	0.21	-2.7
5,728,897	-		AO353_25995	0.21	+1.4
5,728,897	-		AO353_25995	0.21	+0.2
5,728,897	-		AO353_25995	0.21	-0.3
5,728,937	+		AO353_25995	0.24	-0.6
5,728,937	+		AO353_25995	0.24	+2.0
5,728,937	+		AO353_25995	0.24	-0.5
5,728,938	-		AO353_25995	0.24	-0.5
5,728,938	-		AO353_25995	0.24	+0.9
5,728,938	-		AO353_25995	0.24	+1.2
5,728,938	-		AO353_25995	0.24	-1.9
5,728,938	-		AO353_25995	0.24	-0.6
5,728,938	-		AO353_25995	0.24	-0.6
5,728,938	-		AO353_25995	0.24	+0.4
5,728,938	-		AO353_25995	0.24	+0.5
5,728,957	-		AO353_25995	0.25	-0.0