Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24220

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
5,324,541	-		AO353_24215	0.32	-0.2
5,324,599	+		AO353_24215	0.36	+0.3
5,324,617	+		AO353_24215	0.37	-1.2
5,324,618	-		AO353_24215	0.37	+3.4
5,324,618	-		AO353_24215	0.37	+0.6
5,324,618	-				-0.6
5,324,650	+		AO353_24215	0.39	+0.4
5,324,650	+		AO353_24215	0.39	-0.2
5,324,677	+				-0.9
5,324,678	-		AO353_24215	0.41	-0.5
5,324,717	+		AO353_24215	0.44	+0.6
5,324,717	+		AO353_24215	0.44	+0.7
5,324,792	-				-0.6
5,324,792	-		AO353_24215	0.50	+0.6
5,324,792	-		AO353_24215	0.50	+0.1
5,324,806	+		AO353_24215	0.50	+0.1
5,324,806	+		AO353_24215	0.50	-1.9
5,324,806	+		AO353_24215	0.50	-1.9
5,324,807	-		AO353_24215	0.51	+0.4
5,324,871	-		AO353_24215	0.55	-0.4
5,324,905	+		AO353_24215	0.58	+1.2
5,324,906	-		AO353_24215	0.58	-0.2
5,324,906	-		AO353_24215	0.58	-1.3
5,324,906	-		AO353_24215	0.58	-0.9
5,324,976	-		AO353_24215	0.63	-0.7
5,325,071	-		AO353_24215	0.69	-1.6
5,325,089	-		AO353_24215	0.71	-0.3
5,325,089	-		AO353_24215	0.71	+3.7
5,325,117	+				+0.2
5,325,118	-		AO353_24215	0.73	+0.4
5,325,118	-				+1.4
5,325,198	+		AO353_24215	0.78	-0.2
5,325,198	+		AO353_24215	0.78	-1.8
5,325,199	-		AO353_24215	0.78	-1.1
5,325,199	-		AO353_24215	0.78	-0.0
5,325,219	+		AO353_24215	0.80	+1.6
5,325,219	+		AO353_24215	0.80	-0.2
5,325,219	+		AO353_24215	0.80	+0.1
5,325,220	-				+2.4
5,325,220	-		AO353_24215	0.80	+1.2
5,325,296	+		AO353_24215	0.85	-0.6
5,325,296	+		AO353_24215	0.85	-0.6
5,325,296	+		AO353_24215	0.85	-0.2
5,325,296	+		AO353_24215	0.85	+1.9
5,325,296	+		AO353_24215	0.85	-0.4
5,325,296	+		AO353_24215	0.85	-1.1
5,325,297	-		AO353_24215	0.85	+0.3
5,325,297	-		AO353_24215	0.85	+0.8
5,325,297	-		AO353_24215	0.85	-0.2
5,325,304	+		AO353_24215	0.86	-1.2
5,325,305	-		AO353_24215	0.86	+0.5
5,325,308	+		AO353_24215	0.86	-0.2
5,325,308	+		AO353_24215	0.86	+1.6
5,325,309	-		AO353_24215	0.86	-0.4
5,325,309	-		AO353_24215	0.86	+2.2
5,325,309	-		AO353_24215	0.86	-0.9
5,325,309	-		AO353_24215	0.86	-0.1
5,325,309	-		AO353_24215	0.86	+1.4
5,325,332	+		AO353_24215	0.88	+1.4
5,325,332	+		AO353_24215	0.88	-1.7
5,325,332	+		AO353_24215	0.88	-1.5
5,325,332	+		AO353_24215	0.88	+0.1
5,325,400	-				-0.4
5,325,450	-				-1.2
5,325,450	-				+0.8
5,325,481	+				-2.9
5,325,482	-				-0.6
5,325,579	+				+0.5
5,325,694	+		AO353_24220	0.13	+0.5
5,325,694	+		AO353_24220	0.13	+0.1
5,325,694	+		AO353_24220	0.13	+0.3
5,325,695	-		AO353_24220	0.13	-0.5
5,325,695	-		AO353_24220	0.13	-1.9
5,325,695	-		AO353_24220	0.13	+0.4
5,325,719	+		AO353_24220	0.15	+1.6
5,325,719	+		AO353_24220	0.15	+0.8
5,325,719	+		AO353_24220	0.15	+0.8
5,325,719	+		AO353_24220	0.15	-1.4
5,325,719	+		AO353_24220	0.15	-1.2
5,325,719	+		AO353_24220	0.15	-0.9
5,325,719	+		AO353_24220	0.15	+1.0
5,325,720	-		AO353_24220	0.15	-2.2
5,325,720	-		AO353_24220	0.15	+0.0
5,325,720	-		AO353_24220	0.15	+1.1
5,325,720	-		AO353_24220	0.15	-0.2
5,325,720	-		AO353_24220	0.15	+0.1
5,325,733	-		AO353_24220	0.16	-0.7
5,325,790	+		AO353_24220	0.19	+1.4
5,325,790	+		AO353_24220	0.19	+1.4
5,325,790	+		AO353_24220	0.19	-1.0
5,325,790	+		AO353_24220	0.19	+1.8
5,325,790	+		AO353_24220	0.19	+0.9
5,325,790	+		AO353_24220	0.19	-1.1
5,325,790	+		AO353_24220	0.19	-0.6
5,325,790	+		AO353_24220	0.19	-0.6
5,325,790	+		AO353_24220	0.19	+1.0
5,325,790	+		AO353_24220	0.19	-0.9
5,325,791	-		AO353_24220	0.19	-0.6
5,325,791	-				+3.0
5,325,791	-		AO353_24220	0.19	+1.3
5,325,791	-		AO353_24220	0.19	-0.2
5,325,791	-		AO353_24220	0.19	+0.1
5,325,809	-		AO353_24220	0.21	-0.2
5,325,916	+		AO353_24220	0.27	-1.0
5,325,917	-		AO353_24220	0.27	+0.4
5,325,922	-		AO353_24220	0.28	-1.6
5,325,932	-		AO353_24220	0.28	+1.7
5,325,934	+		AO353_24220	0.28	-2.5
5,325,934	+		AO353_24220	0.28	+1.4
5,325,934	+		AO353_24220	0.28	+0.9
5,325,935	-		AO353_24220	0.28	-2.9
5,325,935	-		AO353_24220	0.28	+1.4
5,325,935	-		AO353_24220	0.28	+0.2
5,325,935	-		AO353_24220	0.28	-0.3
5,325,935	-		AO353_24220	0.28	+0.5
5,325,935	-		AO353_24220	0.28	-0.3
5,325,935	-		AO353_24220	0.28	-1.8
5,325,945	+		AO353_24220	0.29	+1.1
5,325,946	-		AO353_24220	0.29	-1.4
5,325,959	+		AO353_24220	0.30	-0.2
5,325,959	+		AO353_24220	0.30	-0.6
5,325,959	+		AO353_24220	0.30	-0.4
5,325,959	+		AO353_24220	0.30	-0.2
5,325,960	-		AO353_24220	0.30	-1.4
5,325,960	-		AO353_24220	0.30	+0.4
5,325,960	-		AO353_24220	0.30	+0.4
5,325,960	-		AO353_24220	0.30	-0.3
5,325,960	-		AO353_24220	0.30	-0.8
5,325,960	-		AO353_24220	0.30	+0.9
5,325,960	-		AO353_24220	0.30	-2.3
5,325,960	-		AO353_24220	0.30	-0.9
5,325,960	-		AO353_24220	0.30	-1.1
5,325,994	+		AO353_24220	0.32	-0.4
5,325,994	+		AO353_24220	0.32	-1.7
5,325,994	+		AO353_24220	0.32	+0.4
5,325,994	+		AO353_24220	0.32	-1.1
5,325,995	-		AO353_24220	0.32	+1.7
5,325,997	+		AO353_24220	0.32	+0.9
5,325,998	-		AO353_24220	0.32	-0.2
5,326,011	+		AO353_24220	0.33	-0.9
5,326,038	+		AO353_24220	0.35	-0.2
5,326,038	+		AO353_24220	0.35	-1.6
5,326,038	+		AO353_24220	0.35	-1.4
5,326,038	+		AO353_24220	0.35	-0.2
5,326,039	-		AO353_24220	0.35	+0.5
5,326,039	-		AO353_24220	0.35	+0.6
5,326,039	-		AO353_24220	0.35	-0.1
5,326,039	-		AO353_24220	0.35	+1.4
5,326,039	-		AO353_24220	0.35	-0.6
5,326,039	-		AO353_24220	0.35	-0.3
5,326,039	-		AO353_24220	0.35	-0.9
5,326,042	+		AO353_24220	0.35	+1.6
5,326,042	+		AO353_24220	0.35	+1.1
5,326,042	+		AO353_24220	0.35	+1.8
5,326,042	+		AO353_24220	0.35	-0.1
5,326,042	+		AO353_24220	0.35	+0.4
5,326,042	+		AO353_24220	0.35	+1.0
5,326,042	+		AO353_24220	0.35	-0.8
5,326,042	+				-0.9
5,326,042	+		AO353_24220	0.35	+0.1
5,326,042	+		AO353_24220	0.35	+1.0
5,326,042	+		AO353_24220	0.35	-0.8
5,326,043	-		AO353_24220	0.35	-1.8
5,326,043	-		AO353_24220	0.35	-0.8
5,326,043	-		AO353_24220	0.35	-2.3
5,326,043	-		AO353_24220	0.35	+0.3
5,326,043	-		AO353_24220	0.35	-1.1
5,326,043	-		AO353_24220	0.35	+0.2
5,326,043	-		AO353_24220	0.35	-2.7
5,326,043	-		AO353_24220	0.35	-1.2
5,326,043	-		AO353_24220	0.35	+1.1
5,326,043	-		AO353_24220	0.35	-1.1
5,326,043	-		AO353_24220	0.35	+0.1
5,326,125	+		AO353_24220	0.40	-1.2
5,326,126	-				+1.4
5,326,126	-		AO353_24220	0.40	-0.8
5,326,126	-		AO353_24220	0.40	+0.8
5,326,129	+		AO353_24220	0.41	-1.2
5,326,129	+		AO353_24220	0.41	+3.7
5,326,129	+		AO353_24220	0.41	+0.7
5,326,129	+		AO353_24220	0.41	+0.7
5,326,130	-		AO353_24220	0.41	-0.8
5,326,216	-		AO353_24220	0.46	-0.3
5,326,234	+		AO353_24220	0.47	+1.6
5,326,235	-		AO353_24220	0.47	-0.9
5,326,241	+		AO353_24220	0.48	+0.5
5,326,346	+		AO353_24220	0.54	+0.7
5,326,346	+				-1.4
5,326,346	+		AO353_24220	0.54	-0.8
5,326,346	+		AO353_24220	0.54	+1.8
5,326,346	+		AO353_24220	0.54	-0.2
5,326,346	+		AO353_24220	0.54	+1.2
5,326,346	+		AO353_24220	0.54	-1.0
5,326,346	+		AO353_24220	0.54	+0.7
5,326,347	-		AO353_24220	0.54	+0.6
5,326,347	-		AO353_24220	0.54	-1.2
5,326,347	-		AO353_24220	0.54	+0.4
5,326,347	-		AO353_24220	0.54	-0.6
5,326,347	-		AO353_24220	0.54	+1.1
5,326,347	-		AO353_24220	0.54	+1.1
5,326,350	+		AO353_24220	0.54	-0.8
5,326,350	+		AO353_24220	0.54	+0.4
5,326,350	+		AO353_24220	0.54	+1.0
5,326,350	+		AO353_24220	0.54	+1.1
5,326,350	+		AO353_24220	0.54	-1.2
5,326,350	+		AO353_24220	0.54	+0.4
5,326,350	+		AO353_24220	0.54	+1.0
5,326,351	-		AO353_24220	0.55	+1.4
5,326,351	-		AO353_24220	0.55	-0.6
5,326,351	-		AO353_24220	0.55	+1.0
5,326,351	-		AO353_24220	0.55	+0.4
5,326,351	-				-1.4
5,326,351	-		AO353_24220	0.55	+1.0
5,326,351	-		AO353_24220	0.55	-0.2
5,326,351	-		AO353_24220	0.55	+0.7
5,326,365	+		AO353_24220	0.55	-0.3
5,326,366	-		AO353_24220	0.55	+0.2
5,326,396	+		AO353_24220	0.57	-1.3
5,326,396	+		AO353_24220	0.57	-0.2
5,326,397	-		AO353_24220	0.57	-0.4
5,326,397	-		AO353_24220	0.57	-2.2
5,326,397	-		AO353_24220	0.57	-1.2
5,326,397	-		AO353_24220	0.57	-0.6
5,326,397	-		AO353_24220	0.57	+0.9
5,326,397	-				+0.7
5,326,459	+		AO353_24220	0.61	-1.8
5,326,459	+		AO353_24220	0.61	-0.1
5,326,460	-		AO353_24220	0.61	+0.1
5,326,460	-				-0.6
5,326,460	-		AO353_24220	0.61	-0.6
5,326,491	+		AO353_24220	0.63	+0.3
5,326,492	-		AO353_24220	0.63	-0.1
5,326,492	-		AO353_24220	0.63	+1.0
5,326,492	-		AO353_24220	0.63	+0.1
5,326,494	+		AO353_24220	0.64	+0.8
5,326,494	+		AO353_24220	0.64	+0.2
5,326,494	+		AO353_24220	0.64	+1.1
5,326,494	+		AO353_24220	0.64	-0.9
5,326,494	+		AO353_24220	0.64	-1.3
5,326,494	+		AO353_24220	0.64	-1.5
5,326,494	+		AO353_24220	0.64	-0.9
5,326,555	+		AO353_24220	0.67	+0.1
5,326,714	+		AO353_24220	0.77	-0.8
5,326,719	-		AO353_24220	0.78	-0.4
5,326,727	-		AO353_24220	0.78	-0.4
5,326,770	+		AO353_24220	0.81	-1.5
5,326,770	+		AO353_24220	0.81	+0.8
5,326,771	-		AO353_24220	0.81	-1.3
5,326,911	+		AO353_24220	0.90	-0.5
5,326,912	-		AO353_24220	0.90	+0.4
5,326,927	+				-0.9
5,326,927	+				-0.9
5,326,982	+				+0.5
5,326,982	+				+0.1
5,326,982	+				-0.3
5,326,983	-				+0.2
5,326,983	-				+0.2
5,327,006	+				-0.1
5,327,007	-				-0.6
5,327,040	-				-0.4
5,327,040	-				-0.2
5,327,072	+				+0.7
5,327,073	-				-0.6
5,327,108	+				-0.8
5,327,108	+				-1.2
5,327,108	+				+1.1
5,327,108	+				-0.9
5,327,108	+				+0.7
5,327,108	+				-1.3
5,327,109	-				-0.6
5,327,109	-				-0.3
5,327,109	-				-0.8
5,327,120	+				-0.8
5,327,120	+				+0.1
5,327,120	+				-0.3
5,327,121	-				+0.7
5,327,121	-				+0.1
5,327,121	-				-0.5
5,327,121	-				-1.0
5,327,121	-				-1.9
5,327,121	-				+0.3
5,327,121	-				-0.8
5,327,121	-				-0.6
5,327,137	+				-0.8
5,327,137	+				-1.9
5,327,137	+				-0.6
5,327,137	+				+1.1
5,327,138	-				-0.9
5,327,138	-				-0.4
5,327,138	-				+1.4
5,327,138	-				+0.1
5,327,147	+				+1.2
5,327,162	-				+0.4
5,327,217	+				+1.0
5,327,217	+				-2.2
5,327,217	+				-0.2
5,327,217	+				-0.6
5,327,217	+				-0.6
5,327,217	+				-0.8
5,327,218	-				+0.8
5,327,218	-				+0.9
5,327,232	-				+1.8
5,327,248	+				-0.2
5,327,249	-				+1.0
5,327,249	-				-1.3
5,327,249	-				-1.5
5,327,249	-				+0.3
5,327,249	-				+0.4
5,327,276	-				-0.4
5,327,280	+				+0.1
5,327,280	+				-0.3
5,327,280	+				-0.9
5,327,280	+				-0.7
5,327,281	-				-0.6
5,327,286	+				-0.9
5,327,286	+				-0.7
5,327,287	-				+0.3
5,327,287	-				+0.1
5,327,287	-				-1.3
5,327,287	-				+1.1
5,327,307	-				-2.1
5,327,307	-				-1.6
5,327,439	+				+0.2
5,327,439	+		AO353_24225	0.22	+2.0
5,327,461	+		AO353_24225	0.27	+0.4
5,327,465	+		AO353_24225	0.28	-0.3
5,327,465	+		AO353_24225	0.28	-0.5
5,327,465	+		AO353_24225	0.28	-1.5
5,327,465	+		AO353_24225	0.28	-0.5
5,327,465	+		AO353_24225	0.28	+0.4
5,327,466	-		AO353_24225	0.29	+0.2
5,327,474	-		AO353_24225	0.30	+0.2
5,327,582	+		AO353_24225	0.56	+0.1
5,327,615	+		AO353_24225	0.64	+0.8
5,327,615	+		AO353_24225	0.64	-0.3
5,327,616	-		AO353_24225	0.64	-1.9
5,327,693	+		AO353_24225	0.82	-0.3
5,327,693	+		AO353_24225	0.82	-0.2
5,327,694	-		AO353_24225	0.83	-1.4
5,327,694	-		AO353_24225	0.83	-0.6
5,327,694	-		AO353_24225	0.83	-1.4
5,327,694	-		AO353_24225	0.83	+0.6
5,327,702	+		AO353_24225	0.84	+0.4
5,327,702	+		AO353_24225	0.84	-0.9
5,327,702	+		AO353_24225	0.84	-1.6
5,327,703	-		AO353_24225	0.85	-0.6
5,327,703	-		AO353_24225	0.85	-1.1
5,327,703	-		AO353_24225	0.85	-2.3
5,327,703	-		AO353_24225	0.85	-0.2
5,327,744	+				+0.6
5,327,744	+				-0.6
5,327,745	-				+0.8
5,327,745	-				-1.4
5,327,745	-				+1.5
5,327,745	-				+1.0
5,327,753	+				-1.2
5,327,753	+				-1.4
5,327,753	+				+0.4
5,327,753	+				-0.6
5,327,753	+				-0.3
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