Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22890

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
5,016,420	+		AO353_22880	0.87	+0.9
5,016,420	+		AO353_22880	0.87	-0.7
5,016,420	+		AO353_22880	0.87	+0.6
5,016,421	-		AO353_22880	0.87	-1.4
5,016,421	-		AO353_22880	0.87	+0.3
5,016,456	-				-1.4
5,016,456	-				+0.5
5,016,456	-				-2.0
5,016,573	+				+0.5
5,016,573	+				+0.9
5,016,573	+				+0.4
5,016,573	+				-0.9
5,016,573	+				+0.1
5,016,594	-				+0.2
5,016,594	-				-0.6
5,016,636	+				+0.2
5,016,660	+				-0.9
5,017,061	-		AO353_22885	0.70	+0.5
5,017,118	+		AO353_22885	0.81	-0.5
5,017,183	+				-0.7
5,017,184	-				-1.5
5,017,184	-				+0.1
5,017,184	-				-1.1
5,017,221	+				+1.1
5,017,227	+				+0.6
5,017,227	+				+1.8
5,017,227	+				+1.5
5,017,228	-				-1.5
5,017,228	-				-1.9
5,017,228	-				-0.1
5,017,278	+				+0.8
5,017,308	+				+2.8
5,017,309	-				-2.9
5,017,368	+				-1.4
5,017,369	-				+0.5
5,017,370	+				-0.6
5,017,370	+				+0.5
5,017,370	+				-1.0
5,017,370	+				+1.9
5,017,371	-				+0.4
5,017,371	-				-1.7
5,017,371	-				-1.7
5,017,371	-				-0.2
5,017,528	+		AO353_22890	0.10	-1.9
5,017,529	-		AO353_22890	0.10	-0.5
5,017,532	+		AO353_22890	0.11	+0.1
5,017,533	-		AO353_22890	0.11	-1.9
5,017,533	-		AO353_22890	0.11	-0.5
5,017,647	+		AO353_22890	0.19	-0.5
5,017,647	+		AO353_22890	0.19	-2.6
5,017,648	-		AO353_22890	0.19	-1.9
5,017,650	+		AO353_22890	0.20	-1.4
5,017,650	+		AO353_22890	0.20	-1.1
5,017,650	+		AO353_22890	0.20	-1.5
5,017,650	+		AO353_22890	0.20	-2.6
5,017,651	-		AO353_22890	0.20	-2.1
5,017,651	-		AO353_22890	0.20	-0.5
5,017,791	+		AO353_22890	0.30	+2.0
5,017,888	-		AO353_22890	0.37	-2.2
5,017,888	-		AO353_22890	0.37	-1.1
5,017,888	-		AO353_22890	0.37	+1.7
5,018,138	+		AO353_22890	0.56	-1.4
5,018,439	+		AO353_22890	0.79	+0.7
5,018,439	+		AO353_22890	0.79	+0.7
5,018,440	-		AO353_22890	0.79	-1.4
5,018,440	-		AO353_22890	0.79	-1.7
5,018,609	+				-1.7
5,018,610	-				-1.1
5,018,610	-				-0.9
5,018,610	-				-1.5
5,018,731	+				-1.1
5,018,795	+				+0.2
5,018,796	-				+1.3
5,018,883	+				-0.9
5,018,883	+				-2.0
5,018,883	+				+1.5
5,018,883	+				+0.5
5,018,883	+				+1.5
5,018,883	+				-0.1
5,018,884	-				-0.4
5,018,884	-				-1.1
5,018,884	-				-1.9
5,018,884	-				-0.0
5,019,095	+		AO353_22895	0.12	-1.7
5,019,095	+		AO353_22895	0.12	-2.0
5,019,095	+		AO353_22895	0.12	-0.5
5,019,321	+		AO353_22895	0.20	-1.4
5,019,321	+		AO353_22895	0.20	-0.7
5,019,322	-		AO353_22895	0.20	+0.1
5,019,322	-		AO353_22895	0.20	-1.7
5,019,431	+		AO353_22895	0.23	+0.7
5,019,453	-		AO353_22895	0.24	-0.1
5,019,453	-		AO353_22895	0.24	-1.3