Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22785

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,988,966	+				+0.9
4,988,966	+				+1.2
4,988,967	-				+0.7
4,988,979	-				+0.5
4,989,003	+				+0.7
4,989,004	-				-2.5
4,989,004	-				-0.3
4,989,004	-				-1.6
4,989,013	+				+1.5
4,989,013	+				+1.5
4,989,201	+		AO353_22780	0.23	+1.3
4,989,283	-		AO353_22780	0.34	+1.1
4,989,283	-		AO353_22780	0.34	-1.1
4,989,347	+		AO353_22780	0.43	+0.3
4,989,347	+		AO353_22780	0.43	-0.5
4,989,347	+		AO353_22780	0.43	+1.0
4,989,347	+		AO353_22780	0.43	+1.1
4,989,348	-		AO353_22780	0.43	-0.5
4,989,348	-		AO353_22780	0.43	+0.9
4,989,348	-		AO353_22780	0.43	-0.1
4,989,348	-		AO353_22780	0.43	+0.7
4,989,351	+		AO353_22780	0.44	-1.4
4,989,429	+		AO353_22780	0.55	-0.1
4,989,430	-		AO353_22780	0.55	+0.1
4,989,430	-		AO353_22780	0.55	-1.5
4,989,695	+				-0.1
4,989,695	+				-0.6
4,989,696	-				+0.1
4,989,737	+				+0.0
4,989,737	+				+1.5
4,989,737	+				-1.0
4,989,737	+				-0.1
4,989,737	+				+0.3
4,989,738	-				-0.7
4,989,738	-				-1.1
4,989,738	-				+1.5
4,989,738	-				-0.3
4,989,738	-				+0.5
4,989,738	-				+1.0
4,989,738	-				+1.3
4,989,738	-				-0.0
4,989,738	-				-2.0
4,989,768	-				-0.1
4,989,789	+				-0.5
4,989,789	+				+0.8
4,989,790	-				+1.5
4,989,824	+				-0.9
4,989,824	+				+0.0
4,989,824	+				-1.5
4,989,824	+				+0.2
4,989,825	-				+0.5
4,989,825	-				+0.2
4,989,825	-				-0.1
4,989,825	-				+1.4
4,989,898	+				+1.9
4,989,909	+				+0.6
4,989,909	+				+0.3
4,989,912	-				-1.1
4,989,912	-				+3.0
4,990,110	-		AO353_22785	0.15	-1.7
4,990,110	-		AO353_22785	0.15	-0.5
4,990,174	+				+1.5
4,990,298	-		AO353_22785	0.33	-1.1
4,990,439	-		AO353_22785	0.47	-1.5
4,990,466	+		AO353_22785	0.50	+0.9
4,990,467	-		AO353_22785	0.50	-1.7
4,990,610	+		AO353_22785	0.64	+1.5
4,990,611	-		AO353_22785	0.64	-1.4
4,990,611	-		AO353_22785	0.64	-1.6
4,990,611	-		AO353_22785	0.64	-1.4
4,990,823	+		AO353_22785	0.85	-1.2
4,990,823	+		AO353_22785	0.85	+0.2
4,990,823	+		AO353_22785	0.85	-0.7
4,990,823	+		AO353_22785	0.85	+0.6
4,990,824	-		AO353_22785	0.85	-1.9
4,990,824	-		AO353_22785	0.85	-2.2
4,990,824	-		AO353_22785	0.85	+0.9
4,990,824	-		AO353_22785	0.85	-1.5
4,990,868	+		AO353_22785	0.89	-0.5
4,990,868	+		AO353_22785	0.89	-2.5
4,990,869	-		AO353_22785	0.89	-0.7
4,991,012	+				+0.7
4,991,013	-				-0.7
4,991,066	+				+1.1
4,991,113	+				+0.5
4,991,114	-				-0.1
4,991,114	-				-0.7
4,991,114	-				-0.7
4,991,145	+				+0.8
4,991,145	+				-0.3
4,991,145	+				-0.1
4,991,145	+				+0.5
4,991,145	+				-0.1
4,991,145	+				+0.6
4,991,146	-				-0.1
4,991,146	-				-0.5
4,991,146	-				+0.8
4,991,146	-				-0.5
4,991,146	-				+0.5
4,991,146	-				-0.1
4,991,146	-				-0.7
4,991,153	+				-0.6
4,991,153	+				-2.9
4,991,154	-				+1.2
4,991,154	-				+1.1
4,991,298	+				-1.7
4,991,298	+				-0.1
4,991,338	+				+1.1
4,991,338	+				-1.0
4,991,338	+				-0.4
4,991,338	+				-0.4
4,991,338	+				+0.8
4,991,338	+				-0.4
4,991,338	+				+0.3
4,991,339	-				-1.7
4,991,367	+				+0.1
4,991,367	+				+1.1
4,991,368	-				+1.5
4,991,377	-				-0.6
4,991,437	+				-0.7
4,991,437	+				+0.5
4,991,438	-				+0.0
4,991,438	-				+0.6
4,991,505	+				-0.4
4,991,506	-				-0.1
4,991,558	+				+1.3
4,991,559	-				-0.0
4,991,586	+		AO353_22790	0.10	+1.0
4,991,586	+		AO353_22790	0.10	-1.1
4,991,586	+				+0.5
4,991,587	-		AO353_22790	0.11	-0.1
4,991,598	+		AO353_22790	0.11	+0.6
4,991,599	-		AO353_22790	0.11	-1.2
4,991,599	-		AO353_22790	0.11	+0.8
4,991,641	+		AO353_22790	0.12	+0.5
4,991,641	+		AO353_22790	0.12	-2.0
4,991,641	+		AO353_22790	0.12	-0.3
4,991,642	-		AO353_22790	0.12	+0.2
4,991,642	-		AO353_22790	0.12	-1.9
4,991,700	+		AO353_22790	0.13	-0.4
4,991,700	+		AO353_22790	0.13	+0.0
4,991,700	+		AO353_22790	0.13	+0.1
4,991,700	+		AO353_22790	0.13	-1.4
4,991,701	-		AO353_22790	0.13	-0.9
4,991,701	-		AO353_22790	0.13	-0.5
4,991,701	-		AO353_22790	0.13	+0.7
4,991,701	-		AO353_22790	0.13	-0.1
4,991,709	+		AO353_22790	0.14	-0.2
4,991,709	+		AO353_22790	0.14	-0.7
4,991,709	+		AO353_22790	0.14	-0.5
4,991,709	+		AO353_22790	0.14	-0.3
4,991,709	+		AO353_22790	0.14	-1.1
4,991,709	+		AO353_22790	0.14	-1.1
4,991,710	-		AO353_22790	0.14	+0.7
4,991,710	-		AO353_22790	0.14	-0.9
4,991,710	-		AO353_22790	0.14	-0.5
4,991,710	-		AO353_22790	0.14	+0.5
4,991,710	-		AO353_22790	0.14	+1.9
4,991,710	-		AO353_22790	0.14	-1.5
4,991,710	-		AO353_22790	0.14	+1.2
4,991,710	-		AO353_22790	0.14	-0.5
4,991,805	+		AO353_22790	0.16	+0.7
4,991,805	+		AO353_22790	0.16	+1.3
4,991,805	+		AO353_22790	0.16	+0.1
4,991,806	-		AO353_22790	0.16	-1.5
4,991,806	-		AO353_22790	0.16	-0.2
4,991,944	+		AO353_22790	0.20	+1.5
4,991,945	-		AO353_22790	0.20	-1.7
4,991,967	+		AO353_22790	0.20	+0.3
4,991,967	+		AO353_22790	0.20	-1.1
4,991,967	+		AO353_22790	0.20	+1.5
4,991,967	+		AO353_22790	0.20	-1.9
4,991,967	+		AO353_22790	0.20	-1.2
4,991,967	+		AO353_22790	0.20	+0.4
4,991,968	-		AO353_22790	0.20	-1.0
4,991,968	-		AO353_22790	0.20	+0.5
4,991,973	+		AO353_22790	0.21	-0.3
4,991,973	+		AO353_22790	0.21	+0.7
4,991,973	+		AO353_22790	0.21	-0.3
4,991,974	-		AO353_22790	0.21	+0.7
4,991,974	-		AO353_22790	0.21	+0.1
4,991,977	+				+3.0
4,991,977	+		AO353_22790	0.21	+1.0
4,991,977	+		AO353_22790	0.21	-0.5
4,991,977	+		AO353_22790	0.21	+0.7
4,991,978	-		AO353_22790	0.21	+0.5
4,991,978	-		AO353_22790	0.21	+0.3