Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22310

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,884,892	+		AO353_22300	0.43	-1.5
4,884,893	-		AO353_22300	0.43	-0.3
4,884,893	-		AO353_22300	0.43	+0.9
4,884,912	+		AO353_22300	0.46	+0.3
4,884,912	+		AO353_22300	0.46	-1.5
4,884,913	-		AO353_22300	0.46	-0.4
4,884,913	-		AO353_22300	0.46	+0.4
4,884,913	-		AO353_22300	0.46	+0.6
4,884,946	+		AO353_22300	0.51	+0.8
4,884,947	-		AO353_22300	0.51	+0.5
4,884,947	-		AO353_22300	0.51	+0.3
4,885,025	+		AO353_22300	0.63	+1.8
4,885,025	+		AO353_22300	0.63	+0.1
4,885,025	+		AO353_22300	0.63	+0.6
4,885,025	+		AO353_22300	0.63	+1.2
4,885,025	+		AO353_22300	0.63	-0.7
4,885,025	+		AO353_22300	0.63	-2.5
4,885,026	-				+1.5
4,885,026	-		AO353_22300	0.63	-0.4
4,885,026	-		AO353_22300	0.63	-0.3
4,885,026	-		AO353_22300	0.63	-1.1
4,885,026	-		AO353_22300	0.63	+1.5
4,885,026	-		AO353_22300	0.63	+0.3
4,885,026	-		AO353_22300	0.63	+1.1
4,885,127	+		AO353_22300	0.78	-0.8
4,885,128	-		AO353_22300	0.79	+1.2
4,885,128	-		AO353_22300	0.79	-0.3
4,885,169	+		AO353_22300	0.85	+0.6
4,885,169	+		AO353_22300	0.85	-1.0
4,885,169	+		AO353_22300	0.85	-0.5
4,885,169	+		AO353_22300	0.85	-0.9
4,885,169	+		AO353_22300	0.85	+0.6
4,885,170	-		AO353_22300	0.85	-0.7
4,885,170	-		AO353_22300	0.85	-0.2
4,885,170	-				-0.5
4,885,229	+				+0.6
4,885,230	-				+0.4
4,885,230	-				-0.2
4,885,230	-				+0.3
4,885,291	+				-0.8
4,885,350	+				-0.8
4,885,350	+				+0.2
4,885,356	+				-0.3
4,885,356	+				+0.8
4,885,356	+				-0.4
4,885,357	-				-2.3
4,885,357	-				+0.4
4,885,357	-				+1.9
4,885,357	-				+0.4
4,885,376	+				+0.5
4,885,376	+				-0.5
4,885,376	+				-0.8
4,885,377	-				+0.9
4,885,377	-				-0.1
4,885,377	-				-0.4
4,885,377	-				-0.4
4,885,377	-				+0.2
4,885,407	-		AO353_22305	0.14	-1.7
4,885,407	-		AO353_22305	0.14	+0.8
4,885,407	-		AO353_22305	0.14	+0.1
4,885,407	-		AO353_22305	0.14	-1.5
4,885,438	-		AO353_22305	0.21	-0.5
4,885,762	+				+1.3
4,885,763	-				+0.9
4,885,780	+				-0.0
4,885,780	+				-0.3
4,885,963	-		AO353_22310	0.11	+1.8
4,886,036	+		AO353_22310	0.16	+0.0
4,886,036	+		AO353_22310	0.16	+1.5
4,886,124	+		AO353_22310	0.21	+0.6
4,886,124	+		AO353_22310	0.21	-1.1
4,886,124	+		AO353_22310	0.21	-0.2
4,886,125	-		AO353_22310	0.21	+2.1
4,886,134	+		AO353_22310	0.22	-0.5
4,886,135	-		AO353_22310	0.22	+1.3
4,886,236	+		AO353_22310	0.28	-0.1
4,886,236	+		AO353_22310	0.28	+0.7
4,886,398	-		AO353_22310	0.39	-1.1
4,886,398	-		AO353_22310	0.39	+0.0
4,886,398	-		AO353_22310	0.39	-0.7
4,886,398	-		AO353_22310	0.39	+0.5
4,886,452	+		AO353_22310	0.42	+0.2
4,886,452	+		AO353_22310	0.42	+0.6
4,886,453	-		AO353_22310	0.42	+1.5
4,886,466	+		AO353_22310	0.43	+0.0
4,886,467	-		AO353_22310	0.43	+0.3
4,886,467	-		AO353_22310	0.43	-0.3
4,886,648	-		AO353_22310	0.54	-1.0
4,886,648	-		AO353_22310	0.54	+0.7
4,886,683	+		AO353_22310	0.57	-0.2
4,886,683	+		AO353_22310	0.57	-0.2
4,886,683	+		AO353_22310	0.57	+1.6
4,886,683	+		AO353_22310	0.57	-0.4
4,886,683	+		AO353_22310	0.57	+0.7
4,886,684	-		AO353_22310	0.57	+0.7
4,886,684	-		AO353_22310	0.57	+0.4
4,886,687	+		AO353_22310	0.57	+0.0
4,886,687	+		AO353_22310	0.57	-1.3
4,886,687	+		AO353_22310	0.57	-0.7
4,886,687	+		AO353_22310	0.57	+0.8
4,886,687	+		AO353_22310	0.57	+0.5
4,886,687	+		AO353_22310	0.57	-1.0
4,886,688	-		AO353_22310	0.57	+0.7
4,886,688	-		AO353_22310	0.57	+0.5
4,886,688	-		AO353_22310	0.57	+0.5
4,886,688	-		AO353_22310	0.57	-1.4
4,886,688	-		AO353_22310	0.57	-0.8
4,886,688	-				+0.5
4,886,688	-		AO353_22310	0.57	-1.5
4,886,688	-		AO353_22310	0.57	+1.1
4,886,688	-		AO353_22310	0.57	+0.4
4,886,729	+		AO353_22310	0.60	+1.0
4,886,729	+		AO353_22310	0.60	-0.3
4,886,730	-		AO353_22310	0.60	-0.3
4,886,779	-		AO353_22310	0.63	+1.5
4,886,850	-		AO353_22310	0.67	+1.2
4,887,098	+		AO353_22310	0.83	+2.0
4,887,099	-		AO353_22310	0.83	+0.6
4,887,261	+				+0.2
4,887,342	+				+0.1
4,887,342	+				+0.5
4,887,342	+				-1.5
4,887,346	+				+0.3
4,887,346	+				-0.5
4,887,346	+				+0.1
4,887,347	-				-0.8
4,887,430	+				-1.1
4,887,430	+				+0.2
4,887,430	+				+0.2
4,887,468	-				+1.2
4,887,468	-				+0.3
4,887,497	+				+2.5
4,887,497	+				+1.2
4,887,553	-		AO353_22315	0.13	+0.7
4,887,553	-		AO353_22315	0.13	+0.7
4,887,564	+		AO353_22315	0.14	-0.1
4,887,564	+		AO353_22315	0.14	+0.4
4,887,564	+		AO353_22315	0.14	+2.1
4,887,565	-		AO353_22315	0.14	-1.5
4,887,565	-		AO353_22315	0.14	+0.1
4,887,565	-		AO353_22315	0.14	+0.5
4,887,565	-		AO353_22315	0.14	-0.2
4,887,565	-				+2.5
4,887,703	-		AO353_22315	0.25	-1.1
4,887,755	+		AO353_22315	0.30	+0.1
4,887,755	+		AO353_22315	0.30	-0.1
4,887,756	-		AO353_22315	0.30	-1.5
4,887,756	-		AO353_22315	0.30	+0.2
4,887,820	-		AO353_22315	0.35	-0.1
4,887,829	+		AO353_22315	0.36	-0.5
4,887,829	+		AO353_22315	0.36	+0.3
4,887,830	-		AO353_22315	0.36	-0.8
4,887,830	-		AO353_22315	0.36	-1.8
4,887,830	-		AO353_22315	0.36	-0.5
4,887,830	-		AO353_22315	0.36	-0.3
4,887,830	-		AO353_22315	0.36	-0.1
4,887,830	-		AO353_22315	0.36	+0.5
4,887,858	-		AO353_22315	0.38	-0.1
4,887,858	-		AO353_22315	0.38	+0.6
4,887,930	-		AO353_22315	0.44	+0.5
4,888,104	-		AO353_22315	0.58	-0.3
4,888,241	+		AO353_22315	0.70	-0.9
4,888,242	-		AO353_22315	0.70	+0.5