Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22275

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,877,086	+				+0.2
4,877,217	+				+0.2
4,877,217	+				+0.8
4,877,217	+				-1.5
4,877,217	+				+0.5
4,877,218	-				-0.2
4,877,218	-				+1.1
4,877,218	-				+1.5
4,877,333	+				-0.2
4,877,333	+				-0.8
4,877,333	+				+0.9
4,877,333	+				-1.5
4,877,333	+				-0.3
4,877,333	+				-1.1
4,877,333	+				-0.8
4,877,333	+				-2.4
4,877,333	+				+0.1
4,877,333	+				-1.1
4,877,333	+				-0.2
4,877,333	+				+0.3
4,877,333	+				-0.8
4,877,333	+				+0.3
4,877,334	-				+0.7
4,877,334	-				-2.1
4,877,334	-				-0.7
4,877,334	-				+0.4
4,877,334	-				-0.1
4,877,334	-				-1.1
4,877,560	+		AO353_22270	0.17	+0.2
4,877,661	+		AO353_22270	0.33	-0.7
4,877,661	+		AO353_22270	0.33	-0.9
4,877,661	+		AO353_22270	0.33	+0.9
4,877,883	+		AO353_22270	0.68	+0.7
4,877,883	+		AO353_22270	0.68	-0.6
4,877,883	+		AO353_22270	0.68	-0.2
4,877,884	-				-1.3
4,877,944	+		AO353_22270	0.78	+0.2
4,877,945	-		AO353_22270	0.78	+0.9
4,877,996	-		AO353_22270	0.86	+2.1
4,877,996	-		AO353_22270	0.86	-1.1
4,877,996	-		AO353_22270	0.86	+0.2
4,877,996	-		AO353_22270	0.86	+0.5
4,877,996	-		AO353_22270	0.86	+0.5
4,878,119	+				+0.4
4,878,309	+		AO353_22275	0.12	+0.5
4,878,309	+		AO353_22275	0.12	-1.3
4,878,309	+		AO353_22275	0.12	-0.2
4,878,309	+		AO353_22275	0.12	-0.8
4,878,309	+		AO353_22275	0.12	+0.4
4,878,310	-		AO353_22275	0.12	-0.3
4,878,310	-		AO353_22275	0.12	-0.7
4,878,310	-		AO353_22275	0.12	-1.3
4,878,310	-		AO353_22275	0.12	+1.0
4,878,310	-		AO353_22275	0.12	+0.5
4,878,310	-		AO353_22275	0.12	+0.2
4,878,337	+		AO353_22275	0.14	+1.5
4,878,338	-		AO353_22275	0.14	+0.3
4,878,516	+		AO353_22275	0.24	-1.0
4,878,516	+		AO353_22275	0.24	-0.4
4,878,516	+		AO353_22275	0.24	-0.5
4,878,702	+		AO353_22275	0.34	+1.2
4,878,804	+		AO353_22275	0.39	-0.2
4,878,858	+		AO353_22275	0.42	-0.1
4,878,858	+		AO353_22275	0.42	-1.0
4,878,858	+		AO353_22275	0.42	-0.3
4,878,858	+		AO353_22275	0.42	+0.3
4,878,858	+		AO353_22275	0.42	+0.4
4,878,859	-		AO353_22275	0.42	+0.9
4,878,859	-		AO353_22275	0.42	+2.1
4,878,859	-		AO353_22275	0.42	+0.2
4,878,859	-		AO353_22275	0.42	-1.8
4,878,859	-		AO353_22275	0.42	-1.3
4,878,860	+		AO353_22275	0.42	+0.5
4,878,860	+		AO353_22275	0.42	+1.1
4,878,861	-		AO353_22275	0.42	-1.4
4,878,861	-		AO353_22275	0.42	+1.2
4,878,945	+		AO353_22275	0.47	-0.3
4,878,946	-		AO353_22275	0.47	-1.6
4,878,946	-		AO353_22275	0.47	-1.3
4,879,110	+		AO353_22275	0.56	-1.3
4,879,111	-		AO353_22275	0.56	-0.2
4,879,211	+		AO353_22275	0.61	-1.0
4,879,211	+		AO353_22275	0.61	+0.2
4,879,211	+		AO353_22275	0.61	-2.4
4,879,212	-		AO353_22275	0.62	-0.1
4,879,212	-		AO353_22275	0.62	+0.8
4,879,212	-		AO353_22275	0.62	+0.1
4,879,290	+		AO353_22275	0.66	-0.5
4,879,290	+		AO353_22275	0.66	-2.0
4,879,291	-		AO353_22275	0.66	+0.7
4,879,291	-		AO353_22275	0.66	+0.8
4,879,404	+		AO353_22275	0.72	-2.1
4,879,404	+		AO353_22275	0.72	-0.3
4,879,404	+		AO353_22275	0.72	-1.9
4,879,426	-		AO353_22275	0.73	+0.1
4,879,467	+		AO353_22275	0.75	-2.0
4,879,467	+		AO353_22275	0.75	+0.1
4,879,467	+				-1.1
4,879,468	-				+2.2
4,879,468	-		AO353_22275	0.75	+0.2
4,879,645	+		AO353_22275	0.85	-0.2
4,879,674	+		AO353_22275	0.87	-1.1
4,879,714	+		AO353_22275	0.89	-0.1
4,879,823	+				-1.3
4,879,824	-				+0.5
4,880,004	+				-0.5
4,880,004	+				+0.9
4,880,159	+		AO353_22280	0.27	-1.3
4,880,159	+		AO353_22280	0.27	+0.7
4,880,159	+		AO353_22280	0.27	-0.4
4,880,159	+				+0.5
4,880,588	+				-0.0
4,880,588	+				+3.8
4,880,589	-				-0.3
4,880,589	-				+2.1
4,880,589	-				-0.3
4,880,589	-				+0.3
4,880,592	+				-1.8
4,880,592	+				+0.2
4,880,592	+				+1.1
4,880,592	+				-0.3
4,880,592	+				+0.2
4,880,592	+				-0.1
4,880,592	+				-0.8
4,880,592	+				+0.8
4,880,592	+				+0.5
4,880,592	+				-2.0
4,880,592	+				+0.3
4,880,592	+				-0.3
4,880,593	-				-1.1
4,880,593	-				-2.3
4,880,593	-				-0.7
4,880,593	-				-1.8
4,880,593	-				-0.4
4,880,593	-				-0.8
4,880,593	-				-2.1
4,880,593	-				-0.5
4,880,593	-				+1.3
4,880,593	-				+0.4
4,880,593	-				-0.3
4,880,593	-				-1.0
4,880,593	-				-1.8
4,880,594	+				-1.0
4,880,594	+				+0.1
4,880,594	+				-0.7
4,880,595	-				+0.9
4,880,595	-				+2.1
4,880,613	+				+0.8
4,880,613	+				+1.1
4,880,613	+				-1.3
4,880,613	+				+0.2
4,880,613	+				+0.4
4,880,614	-				+0.1
4,880,614	-				+0.2
4,880,660	-				+0.7
4,880,781	+				+1.3
4,880,781	+				-0.5
4,880,820	+				+0.3