Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21430

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,689,749	-		AO353_21420	0.41	-0.9
4,689,816	+		AO353_21420	0.76	-0.4
4,689,816	+		AO353_21420	0.76	+1.0
4,689,816	+		AO353_21420	0.76	+1.0
4,689,816	+		AO353_21420	0.76	+2.1
4,689,816	+		AO353_21420	0.76	+1.0
4,689,816	+		AO353_21420	0.76	+0.6
4,689,817	-		AO353_21420	0.76	-0.3
4,689,817	-		AO353_21420	0.76	-1.0
4,689,817	-				+0.6
4,689,817	-		AO353_21420	0.76	-1.9
4,689,817	-		AO353_21420	0.76	-1.3
4,689,817	-		AO353_21420	0.76	-1.3
4,689,817	-		AO353_21420	0.76	-2.8
4,689,817	-		AO353_21420	0.76	-0.9
4,689,817	-		AO353_21420	0.76	-2.4
4,689,817	-		AO353_21420	0.76	-0.0
4,689,817	-		AO353_21420	0.76	-1.9
4,689,817	-				-1.0
4,689,862	+				+0.9
4,689,862	+				+1.1
4,689,862	+				+1.4
4,689,862	+				+0.1
4,689,863	-				-1.0
4,689,863	-				-2.8
4,689,863	-				-0.3
4,689,877	+				-0.8
4,689,878	-				-3.3
4,689,895	-				-1.9
4,689,906	+				+1.0
4,689,906	+				-0.1
4,689,907	-				-1.0
4,689,907	-				+1.6
4,689,907	-				-1.4
4,689,907	-				-1.3
4,689,907	-				-0.6
4,689,907	-				-2.1
4,689,907	-				-0.0
4,689,911	-				-2.0
4,689,916	-				-2.6
4,689,916	-				-0.8
4,689,935	-				-1.2
4,689,935	-				-1.1
4,689,967	+				+0.3
4,689,967	+				-0.4
4,689,968	-				-0.4
4,689,968	-				-0.0
4,689,968	-				-1.3
4,689,971	+				-1.3
4,689,971	+				-0.3
4,689,972	-				-1.2
4,689,972	-				-1.4
4,689,994	-				-3.0
4,689,994	-				-0.4
4,689,994	-				+0.6
4,690,032	-				-0.8
4,690,032	-				-0.9
4,690,036	+				+1.1
4,690,036	+				+1.3
4,690,036	+				+0.6
4,690,036	+				+1.3
4,690,036	+				-0.4
4,690,037	-				-2.8
4,690,040	+				+0.1
4,690,041	-				-2.3
4,690,049	-				-1.0
4,690,049	-				-1.8
4,690,126	+				+1.6
4,690,126	+				+3.4
4,690,127	-				-1.4
4,690,127	-				-1.9
4,690,127	-				-2.2
4,690,138	-				-1.0
4,690,243	+				-1.0
4,690,243	+				-1.3
4,690,243	+				-1.1
4,690,281	+				-2.0
4,690,282	-				-2.1
4,690,282	-				-1.6
4,690,285	+				-1.0
4,690,285	+				-0.4
4,690,285	+				-1.8
4,690,286	-				-0.4
4,690,286	-				-2.9
4,690,286	-				-0.8
4,690,286	-				-0.8
4,690,286	-				-1.4
4,690,286	-				-2.0
4,690,365	-		AO353_21425	0.16	-2.3
4,690,390	+		AO353_21425	0.21	-2.8
4,690,394	+				-0.0
4,690,395	-		AO353_21425	0.22	-0.4
4,690,395	-		AO353_21425	0.22	-2.4
4,690,395	-		AO353_21425	0.22	-2.0
4,690,395	-		AO353_21425	0.22	-0.4
4,690,395	-		AO353_21425	0.22	-1.8
4,690,395	-		AO353_21425	0.22	-1.4
4,690,562	+		AO353_21425	0.59	-2.3
4,690,621	-		AO353_21425	0.72	-1.8
4,690,650	+		AO353_21425	0.79	-1.0
4,690,650	+		AO353_21425	0.79	-1.4
4,690,651	-		AO353_21425	0.79	-2.1
4,690,651	-		AO353_21425	0.79	-1.0
4,690,722	+				-1.3
4,690,742	+				+0.7
4,690,742	+				-1.3
4,690,742	+				-2.2
4,690,742	+				-1.4
4,690,743	-				+0.1
4,690,743	-				-2.4
4,690,743	-				-2.1
4,690,743	-				-2.4
4,690,871	+		AO353_21430	0.62	-1.6
4,690,871	+		AO353_21430	0.62	-1.0
4,690,871	+		AO353_21430	0.62	-2.0
4,690,871	+		AO353_21430	0.62	-0.8
4,690,872	-		AO353_21430	0.62	-1.0
4,690,872	-		AO353_21430	0.62	-0.8
4,690,892	+		AO353_21430	0.72	+0.3
4,690,893	-		AO353_21430	0.73	-0.8
4,690,976	+				-0.9
4,690,976	+				+2.6
4,690,976	+				+0.7
4,690,977	-				-0.4
4,690,979	+				-0.5
4,690,979	+				-2.1
4,690,979	+				-1.7
4,690,979	+				-1.0
4,690,979	+				-1.1
4,690,979	+				-0.9
4,690,979	+				-3.2
4,690,980	-				-1.0
4,690,980	-				-0.6
4,690,980	-				+0.6
4,690,980	-				+1.2
4,690,980	-				+0.2
4,690,997	+				-1.9
4,691,087	+				-2.1
4,691,138	+				-0.4
4,691,139	-				-0.8
4,691,251	-		AO353_21435	0.18	-1.4
4,691,251	-		AO353_21435	0.18	-1.6
4,691,428	+		AO353_21435	0.36	-0.4
4,691,428	+		AO353_21435	0.36	-0.5
4,691,429	-		AO353_21435	0.36	-0.8
4,691,506	+		AO353_21435	0.43	+1.6
4,691,507	-		AO353_21435	0.43	+0.8
4,691,507	-		AO353_21435	0.43	-1.9
4,691,559	+		AO353_21435	0.48	-1.4
4,691,611	+		AO353_21435	0.54	-1.0
4,691,611	+		AO353_21435	0.54	+0.4
4,691,629	+		AO353_21435	0.55	+1.0
4,691,629	+		AO353_21435	0.55	-0.4
4,691,629	+		AO353_21435	0.55	-2.3
4,691,629	+				+2.6
4,691,629	+		AO353_21435	0.55	+0.7
4,691,629	+		AO353_21435	0.55	-2.0
4,691,629	+				-0.4
4,691,629	+		AO353_21435	0.55	-0.1
4,691,629	+		AO353_21435	0.55	-0.3
4,691,629	+		AO353_21435	0.55	+0.7
4,691,629	+		AO353_21435	0.55	-2.6
4,691,629	+		AO353_21435	0.55	-2.0
4,691,630	-		AO353_21435	0.55	+1.6
4,691,630	-		AO353_21435	0.55	-0.1
4,691,630	-		AO353_21435	0.55	-2.1
4,691,630	-		AO353_21435	0.55	+0.6
4,691,630	-		AO353_21435	0.55	-0.3
4,691,630	-		AO353_21435	0.55	-0.8
4,691,630	-		AO353_21435	0.55	-2.0
4,691,630	-		AO353_21435	0.55	-0.4
4,691,630	-		AO353_21435	0.55	+0.6
4,691,630	-		AO353_21435	0.55	-0.0
4,691,630	-				+1.6
4,691,630	-		AO353_21435	0.55	-1.3
4,691,630	-		AO353_21435	0.55	-0.8
4,691,630	-		AO353_21435	0.55	-0.8
4,691,713	+		AO353_21435	0.64	-0.8
4,691,713	+		AO353_21435	0.64	-0.3
4,691,714	-		AO353_21435	0.64	+1.9
4,691,714	-		AO353_21435	0.64	-0.8
4,691,714	-		AO353_21435	0.64	+0.8
4,691,714	-		AO353_21435	0.64	+0.6
4,691,716	+				+1.6
4,691,716	+		AO353_21435	0.64	-2.6
4,691,916	+		AO353_21435	0.84	-1.4
4,691,917	-		AO353_21435	0.84	-1.6