Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21400

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,685,734	+		AO353_21395	0.55	+1.0
4,685,735	-		AO353_21395	0.55	-0.4
4,685,802	+		AO353_21395	0.60	+0.6
4,685,802	+				+1.6
4,685,802	+		AO353_21395	0.60	+1.6
4,685,802	+		AO353_21395	0.60	-0.0
4,685,802	+		AO353_21395	0.60	-1.4
4,685,802	+		AO353_21395	0.60	-1.3
4,685,803	-		AO353_21395	0.60	-1.0
4,685,803	-		AO353_21395	0.60	+0.6
4,685,803	-		AO353_21395	0.60	-0.3
4,685,803	-		AO353_21395	0.60	+0.6
4,685,803	-		AO353_21395	0.60	-0.6
4,685,803	-		AO353_21395	0.60	-0.0
4,685,803	-		AO353_21395	0.60	+0.9
4,685,805	+		AO353_21395	0.60	-0.2
4,685,805	+		AO353_21395	0.60	+0.3
4,685,805	+		AO353_21395	0.60	+0.1
4,685,805	+		AO353_21395	0.60	-0.4
4,685,805	+		AO353_21395	0.60	+0.2
4,685,806	-		AO353_21395	0.60	+1.4
4,685,806	-		AO353_21395	0.60	-0.5
4,685,806	-		AO353_21395	0.60	+0.6
4,685,806	-		AO353_21395	0.60	+0.2
4,685,806	-		AO353_21395	0.60	-0.8
4,685,806	-		AO353_21395	0.60	-1.6
4,685,806	-		AO353_21395	0.60	-2.0
4,685,940	-		AO353_21395	0.70	+0.6
4,686,039	+		AO353_21395	0.77	+1.0
4,686,040	-		AO353_21395	0.77	-1.9
4,686,040	-		AO353_21395	0.77	-0.3
4,686,040	-		AO353_21395	0.77	-0.3
4,686,162	+		AO353_21395	0.86	+0.8
4,686,163	-		AO353_21395	0.87	+2.5
4,686,163	-		AO353_21395	0.87	-0.3
4,686,163	-		AO353_21395	0.87	-0.0
4,686,179	+		AO353_21395	0.88	-0.1
4,686,201	+		AO353_21395	0.89	-1.4
4,686,201	+		AO353_21395	0.89	-1.0
4,686,202	-		AO353_21395	0.89	-1.9
4,686,202	-		AO353_21395	0.89	-1.4
4,686,202	-		AO353_21395	0.89	-1.8
4,686,216	+				-0.4
4,686,216	+				+1.0
4,686,217	-				-1.6
4,686,217	-				-1.4
4,686,217	-				-0.1
4,686,219	+				-0.0
4,686,219	+				-0.4
4,686,219	+				-0.5
4,686,219	+				-0.3
4,686,220	-				+1.7
4,686,267	+				-0.7
4,686,267	+				-0.0
4,686,267	+				-0.0
4,686,267	+				-1.4
4,686,267	+				+0.4
4,686,268	-				+2.0
4,686,268	-				-0.3
4,686,268	-				-0.1
4,686,268	-				-0.0
4,686,268	-				-0.4
4,686,268	-				-0.3
4,686,268	-				+0.5
4,686,289	+				-0.9
4,686,289	+				-0.4
4,686,289	+				+1.6
4,686,290	-				+0.6
4,686,290	-				+1.6
4,686,290	-				+0.6
4,686,290	-				-0.6
4,686,290	-				-1.0
4,686,322	+				+1.3
4,686,342	+				-0.4
4,686,342	+				-2.3
4,686,343	-				-1.4
4,686,343	-				-0.8
4,686,343	-				-0.9
4,686,365	+				+1.2
4,686,365	+				-0.8
4,686,365	+				+1.2
4,686,366	-				+0.1
4,686,404	+				-0.7
4,686,404	+				+0.6
4,686,404	+				+0.6
4,686,404	+				-2.4
4,686,404	+				-2.0
4,686,404	+				-1.4
4,686,404	+				+0.2
4,686,404	+				-1.3
4,686,404	+				+1.3
4,686,404	+				-0.5
4,686,404	+				-1.1
4,686,404	+				+0.6
4,686,404	+				-1.0
4,686,404	+				+2.1
4,686,404	+				-0.8
4,686,405	-				-0.4
4,686,405	-				+1.0
4,686,405	-				-0.0
4,686,405	-				+0.7
4,686,405	-				-0.8
4,686,405	-				-1.9
4,686,405	-				+0.3
4,686,405	-				-0.6
4,686,405	-				-0.0
4,686,405	-				-0.2
4,686,405	-				+0.3
4,686,405	-				-1.4
4,686,406	+				-0.8
4,686,406	+				-1.8
4,686,406	+				+0.4
4,686,406	+				-0.8
4,686,407	-				-0.1
4,686,407	-				-1.6
4,686,407	-				-0.4
4,686,407	-				-0.6
4,686,408	+				+0.1
4,686,408	+				-1.1
4,686,408	+				+1.6
4,686,408	+				+1.6
4,686,408	+				+0.2
4,686,408	+				-0.1
4,686,408	+				-2.0
4,686,409	-				+1.2
4,686,409	-				+2.0
4,686,409	-				-1.0
4,686,409	-				+0.7
4,686,409	-				-0.2
4,686,409	-				+0.6
4,686,434	+				-1.5
4,686,434	+				+2.6
4,686,436	+				+1.1
4,686,436	+				+0.2
4,686,437	-				+1.7
4,686,437	-				-0.3
4,686,471	+				-0.6
4,686,471	+				+0.3
4,686,472	-				+1.2
4,686,472	-				+1.4
4,686,481	+				-0.8
4,686,482	-				+1.6
4,686,482	-				+0.3
4,686,482	-				+0.2
4,686,540	+				-1.1
4,686,540	+				-0.9
4,686,557	+				+2.6
4,686,558	-				-2.6
4,686,558	-				-0.9
4,686,587	+				+0.6
4,686,587	+				-1.8
4,686,587	+				-0.4
4,686,588	-				-2.4
4,686,588	-				+1.6
4,686,588	-				-1.6
4,686,709	+				-0.0
4,686,709	+				+0.6
4,686,710	-				+0.6
4,686,710	-				-0.4
4,686,710	-				-0.8
4,686,931	-		AO353_21400	0.64	-2.2
4,687,015	+		AO353_21400	0.85	+0.2
4,687,015	+		AO353_21400	0.85	+0.6
4,687,015	+		AO353_21400	0.85	-1.4
4,687,015	+		AO353_21400	0.85	-1.3
4,687,016	-		AO353_21400	0.85	+1.6
4,687,016	-		AO353_21400	0.85	-0.4
4,687,171	+				+0.4
4,687,172	-				-0.8
4,687,185	+				-0.2
4,687,221	+				+0.4
4,687,221	+				-1.3
4,687,222	-				-0.9
4,687,225	+				+0.3
4,687,225	+				+0.4
4,687,237	-				+1.8
4,687,237	-				-0.4
4,687,264	+				-2.5
4,687,264	+				+0.5
4,687,264	+				+0.7
4,687,265	-				-0.5
4,687,433	+				-1.2
4,687,434	-				-0.9
4,687,434	-				-0.3
4,687,462	+		AO353_21405	0.11	+0.5
4,687,462	+		AO353_21405	0.11	+0.7
4,687,463	-		AO353_21405	0.11	-1.8
4,687,556	+		AO353_21405	0.17	+1.0
4,687,914	+		AO353_21405	0.39	-1.6
4,687,914	+		AO353_21405	0.39	-0.2
4,687,915	-		AO353_21405	0.39	+1.1
4,687,915	-		AO353_21405	0.39	+1.6