Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20780

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,552,430	+				+1.1
4,552,464	-				-0.5
4,552,465	+				+1.2
4,552,465	+				+0.3
4,552,465	+				-1.7
4,552,466	-				-0.5
4,552,466	-				-0.6
4,552,596	+		AO353_20775	0.13	-0.2
4,552,596	+		AO353_20775	0.13	+0.6
4,552,596	+		AO353_20775	0.13	-0.1
4,552,596	+		AO353_20775	0.13	-0.9
4,552,596	+		AO353_20775	0.13	+0.2
4,552,596	+		AO353_20775	0.13	-0.5
4,552,597	-		AO353_20775	0.13	+2.2
4,552,597	-		AO353_20775	0.13	-0.2
4,552,597	-		AO353_20775	0.13	-0.7
4,552,597	-		AO353_20775	0.13	+0.6
4,552,597	-		AO353_20775	0.13	+0.6
4,552,597	-		AO353_20775	0.13	-1.5
4,552,597	-		AO353_20775	0.13	-0.5
4,552,641	+		AO353_20775	0.20	-1.5
4,552,669	+		AO353_20775	0.24	+1.4
4,552,669	+		AO353_20775	0.24	+1.1
4,552,669	+		AO353_20775	0.24	-0.1
4,552,670	-		AO353_20775	0.24	-0.5
4,552,670	-		AO353_20775	0.24	-0.9
4,552,670	-		AO353_20775	0.24	+0.3
4,552,818	+		AO353_20775	0.45	-1.1
4,552,818	+		AO353_20775	0.45	+0.4
4,552,821	+		AO353_20775	0.45	+0.2
4,552,821	+		AO353_20775	0.45	-1.5
4,552,821	+		AO353_20775	0.45	-2.9
4,552,821	+		AO353_20775	0.45	+0.9
4,552,821	+		AO353_20775	0.45	-1.0
4,552,821	+		AO353_20775	0.45	-0.4
4,552,821	+		AO353_20775	0.45	+0.9
4,552,821	+		AO353_20775	0.45	+0.8
4,552,822	-		AO353_20775	0.45	+1.0
4,552,822	-		AO353_20775	0.45	+1.2
4,552,822	-		AO353_20775	0.45	-0.5
4,552,822	-		AO353_20775	0.45	+1.1
4,552,822	-		AO353_20775	0.45	-0.2
4,552,822	-		AO353_20775	0.45	-1.2
4,552,890	+		AO353_20775	0.55	-0.4
4,552,890	+		AO353_20775	0.55	-1.9
4,552,890	+		AO353_20775	0.55	+0.8
4,552,911	+		AO353_20775	0.58	+0.3
4,552,911	+		AO353_20775	0.58	+0.0
4,552,911	+		AO353_20775	0.58	-1.3
4,552,911	+		AO353_20775	0.58	-0.3
4,552,911	+		AO353_20775	0.58	+0.2
4,552,912	-		AO353_20775	0.58	-0.2
4,552,912	-		AO353_20775	0.58	-1.4
4,552,912	-		AO353_20775	0.58	+0.9
4,552,929	+		AO353_20775	0.61	+1.3
4,552,929	+		AO353_20775	0.61	-0.5
4,552,929	+		AO353_20775	0.61	+0.5
4,552,929	+		AO353_20775	0.61	-2.5
4,552,930	-		AO353_20775	0.61	+1.6
4,552,930	-		AO353_20775	0.61	+1.9
4,552,930	-		AO353_20775	0.61	+0.6
4,553,043	+		AO353_20775	0.77	-1.5
4,553,043	+		AO353_20775	0.77	+0.2
4,553,043	+		AO353_20775	0.77	-0.1
4,553,043	+		AO353_20775	0.77	-0.7
4,553,043	+		AO353_20775	0.77	-1.4
4,553,044	-		AO353_20775	0.77	+0.5
4,553,062	+		AO353_20775	0.80	-0.2
4,553,063	-		AO353_20775	0.80	-0.4
4,553,130	+		AO353_20775	0.89	+0.4
4,553,131	-		AO353_20775	0.89	-0.4
4,553,131	-		AO353_20775	0.89	+1.4
4,553,260	+				-0.9
4,553,263	+				+0.4
4,553,264	-				+0.8
4,553,344	+				+0.2
4,553,345	-				+0.7
4,553,345	-				-0.7
4,553,347	+				-1.5
4,553,347	+				+0.1
4,553,347	+				+1.5
4,553,347	+				+0.4
4,553,347	+				+0.2
4,553,347	+				+0.4
4,553,347	+				-1.1
4,553,348	-				+0.1
4,553,348	-				-1.4
4,553,348	-				-0.5
4,553,348	-				+0.1
4,553,348	-				+0.3
4,553,348	-				+0.2
4,553,353	+				+0.6
4,553,353	+				-0.5
4,553,362	+				-0.7
4,553,363	-				+1.1
4,553,363	-				-0.5
4,553,363	-				-0.4
4,553,366	+				-2.6
4,553,367	-				-2.1
4,553,367	-				+0.6
4,553,435	+				+0.6
4,553,530	+		AO353_20780	0.30	+0.5
4,553,530	+		AO353_20780	0.30	+0.1
4,553,531	-		AO353_20780	0.30	-0.7
4,553,612	+				+0.6
4,553,613	-		AO353_20780	0.48	-0.4
4,553,613	-		AO353_20780	0.48	-1.4
4,553,613	-		AO353_20780	0.48	-1.5
4,553,613	-		AO353_20780	0.48	-0.4
4,553,613	-		AO353_20780	0.48	-1.3
4,553,613	-		AO353_20780	0.48	-0.7
4,553,613	-		AO353_20780	0.48	-1.8
4,553,615	+		AO353_20780	0.49	+0.9
4,553,615	+		AO353_20780	0.49	-0.8
4,553,616	-		AO353_20780	0.49	-1.5
4,553,616	-		AO353_20780	0.49	-1.1
4,553,616	-		AO353_20780	0.49	+1.1
4,553,653	-		AO353_20780	0.57	-1.3
4,553,653	-		AO353_20780	0.57	-0.1
4,553,653	-		AO353_20780	0.57	+0.1
4,553,909	+				-1.4
4,553,909	+				-0.7
4,553,910	-				+1.2
4,553,910	-				-2.5
4,553,910	-				-1.4
4,553,930	+				-0.9
4,553,931	-				+0.5
4,553,931	-				+0.4
4,553,954	+				-0.7
4,553,954	+				-0.2
4,553,955	-				+0.1
4,553,955	-				-1.7
4,554,107	+		AO353_20785	0.15	+0.1
4,554,122	+		AO353_20785	0.23	-1.4
4,554,122	+		AO353_20785	0.23	-0.1
4,554,123	-		AO353_20785	0.23	-0.4
4,554,123	-		AO353_20785	0.23	+0.1
4,554,123	-		AO353_20785	0.23	-1.7
4,554,123	-		AO353_20785	0.23	-1.5
4,554,123	-		AO353_20785	0.23	-1.4
4,554,130	+		AO353_20785	0.27	-0.7
4,554,131	-		AO353_20785	0.27	+0.1
4,554,218	+		AO353_20785	0.72	-2.1
4,554,219	-		AO353_20785	0.72	+0.1
4,554,219	-		AO353_20785	0.72	-0.8
4,554,237	+		AO353_20785	0.82	-2.3
4,554,237	+		AO353_20785	0.82	-1.5
4,554,237	+		AO353_20785	0.82	-0.9
4,554,237	+		AO353_20785	0.82	-2.3
4,554,238	-		AO353_20785	0.82	-0.7
4,554,238	-		AO353_20785	0.82	-1.5
4,554,238	-		AO353_20785	0.82	-0.2
4,554,265	-				-1.9
4,554,265	-				-1.9
4,554,287	+				-2.7
4,554,287	+				+1.1
4,554,287	+				-1.2
4,554,288	-				-0.5
4,554,288	-				+1.6
4,554,288	-				-0.7
4,554,295	+				-0.9
4,554,331	+				-0.9
4,554,331	+				-0.5
4,554,331	+				-1.2
4,554,331	+				-0.8
4,554,331	+				-0.2
4,554,331	+				-0.9
4,554,331	+				-0.9
4,554,331	+				-0.4
4,554,331	+				-3.5
4,554,332	-				+1.6
4,554,332	-				+0.8
4,554,332	-				+0.4
4,554,332	-				+3.6
4,554,332	-				-0.7
4,554,332	-				+0.8
4,554,332	-				+1.1
4,554,332	-				+0.1
4,554,332	-				+0.8
4,554,332	-				+0.6
4,554,335	+				-1.8
4,554,335	+				-2.0
4,554,335	+				+0.3
4,554,335	+				+0.6
4,554,335	+				-0.3
4,554,336	-				+4.0
4,554,336	-				-0.8
4,554,336	-				+0.6
4,554,336	-				+0.4
4,554,336	-				-0.4
4,554,336	-				+0.4
4,554,337	+				-1.7
4,554,337	+				-0.7
4,554,337	+				-0.9
4,554,337	+				-2.1
4,554,338	-				+0.2
4,554,338	-				+0.6
4,554,338	-				+1.3
4,554,338	-				+0.8
4,554,338	-				+0.6
4,554,338	-				+1.1
4,554,338	-				-0.3
4,554,338	-				+1.4
4,554,338	-				-0.4
4,554,338	-				+0.3
4,554,342	+				-1.2
4,554,343	-				+1.2
4,554,343	-				+1.4
4,554,395	+				-2.5
4,554,395	+				+0.1
4,554,396	-				+1.2
4,554,396	-				+1.2
4,554,396	-				+1.1
4,554,396	-				-0.4
4,554,413	+				+0.3
4,554,413	+				+0.6
4,554,414	-				+1.4
4,554,414	-				-0.2
4,554,415	+				-1.2
4,554,415	+				-0.4
4,554,415	+				-2.4
4,554,415	+				-0.7
4,554,415	+				-1.2
4,554,416	-				+0.6
4,554,416	-				+1.0
4,554,416	-				+1.3
4,554,416	-				+0.1
4,554,416	-				+2.2
4,554,416	-				+2.5
4,554,416	-				-0.7
4,554,458	+				-1.5
4,554,458	+				-1.7
4,554,486	+				-1.5
4,554,556	+				-1.7
4,554,557	-				+2.3
4,554,729	+		AO353_20790	0.57	-0.8
4,554,729	+		AO353_20790	0.57	+0.0
4,554,729	+		AO353_20790	0.57	+1.0
4,554,729	+		AO353_20790	0.57	-1.2
4,554,730	-		AO353_20790	0.57	+1.6
4,554,730	-		AO353_20790	0.57	+0.5
4,554,730	-		AO353_20790	0.57	-0.5
4,554,730	-		AO353_20790	0.57	+0.8
4,554,730	-		AO353_20790	0.57	+0.6
4,554,730	-		AO353_20790	0.57	-1.5
4,554,749	+		AO353_20790	0.62	-0.9