Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20370

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,478,567	-		AO353_20365	0.45	-0.7
4,479,109	-				-0.1
4,479,285	-		AO353_20370	0.46	-0.3
4,479,285	-		AO353_20370	0.46	-1.5
4,479,285	-		AO353_20370	0.46	-1.5
4,479,382	-		AO353_20370	0.70	-1.7
4,479,382	-		AO353_20370	0.70	-0.9
4,479,382	-		AO353_20370	0.70	+0.4
4,479,382	-		AO353_20370	0.70	-0.9
4,479,382	-		AO353_20370	0.70	+0.1
4,479,429	-		AO353_20370	0.82	-1.3
4,479,429	-		AO353_20370	0.82	+1.7
4,479,429	-		AO353_20370	0.82	-0.9
4,479,484	-				-2.0
4,479,484	-				+0.2
4,479,486	-				-0.8
4,479,486	-				-1.9
4,479,486	-				+0.0
4,479,486	-				+0.7
4,479,536	+				-0.1
4,479,537	-				-0.6
4,479,537	-				-0.9
4,479,537	-				-1.5
4,479,553	-				-1.7
4,479,579	-				-0.8
4,479,596	+				+0.5
4,479,597	-				+1.7
4,479,597	-				-0.5
4,479,597	-				-0.7
4,479,597	-				-0.4
4,479,597	-				-0.9
4,479,597	-				+0.9
4,479,668	+				-1.0
4,479,668	+				-0.3
4,479,668	+				+0.4
4,479,669	-				-1.2
4,479,669	-				+1.7
4,479,669	-				-0.5
4,479,669	-				+0.1
4,479,686	+				+1.2
4,479,686	+				-0.3
4,479,687	-				+1.0
4,479,687	-				-0.8
4,479,794	+		AO353_20375	0.12	+0.3
4,479,795	-		AO353_20375	0.12	+0.4
4,479,795	-		AO353_20375	0.12	+0.1
4,479,795	-		AO353_20375	0.12	-0.2
4,479,836	+		AO353_20375	0.16	+0.3
4,479,836	+		AO353_20375	0.16	+0.7
4,479,837	-		AO353_20375	0.16	+0.1
4,479,886	+		AO353_20375	0.22	+0.7
4,479,886	+		AO353_20375	0.22	-0.0
4,479,887	-		AO353_20375	0.22	-1.1
4,479,926	+		AO353_20375	0.26	+0.4
4,479,926	+		AO353_20375	0.26	-0.0
4,479,926	+		AO353_20375	0.26	-0.9
4,479,926	+		AO353_20375	0.26	+0.0
4,479,927	-		AO353_20375	0.26	+0.4
4,479,927	-		AO353_20375	0.26	-0.3
4,479,927	-		AO353_20375	0.26	-0.8
4,479,927	-		AO353_20375	0.26	-1.6
4,479,927	-		AO353_20375	0.26	+0.0
4,479,989	+		AO353_20375	0.33	+0.5
4,479,989	+		AO353_20375	0.33	+1.5
4,479,989	+		AO353_20375	0.33	-1.7
4,479,989	+		AO353_20375	0.33	-0.3
4,480,040	+		AO353_20375	0.38	-0.5
4,480,041	-		AO353_20375	0.38	-0.6
4,480,103	+		AO353_20375	0.45	-0.2
4,480,103	+		AO353_20375	0.45	-2.0
4,480,104	-		AO353_20375	0.45	-0.5
4,480,319	+		AO353_20375	0.68	-0.3