Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19030

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,178,263	+				-1.3
4,178,263	+				-1.5
4,178,263	+				-1.5
4,178,263	+				-0.8
4,178,264	-				-1.9
4,178,264	-				-0.6
4,178,264	-				-0.4
4,178,266	+				-2.3
4,178,266	+				-2.2
4,178,266	+				-2.2
4,178,267	-				-1.4
4,178,267	-				-0.6
4,178,267	-				-2.8
4,178,267	-				-1.9
4,178,267	-				-2.1
4,178,267	-				-1.5
4,178,267	-				-2.1
4,178,267	-				-2.3
4,178,267	-				-0.2
4,178,270	+				-1.6
4,178,270	+				+0.1
4,178,270	+				-0.9
4,178,270	+				-0.6
4,178,270	+				-0.7
4,178,270	+				-1.5
4,178,270	+				-0.2
4,178,271	-				+0.2
4,178,271	-				-0.8
4,178,271	-				-2.8
4,178,271	-				-0.5
4,178,271	-				-1.3
4,178,271	-				-0.6
4,178,271	-				-1.6
4,178,271	-				-1.1
4,178,271	-				-0.2
4,178,271	-				+0.4
4,178,271	-				-0.6
4,178,271	-				-2.9
4,178,304	+				-1.5
4,178,304	+				-0.3
4,178,304	+				-0.3
4,178,304	+				+0.1
4,178,304	+				-0.6
4,178,304	+				-0.6
4,178,304	+				-1.3
4,178,304	+				-2.5
4,178,304	+				-0.6
4,178,304	+				+0.1
4,178,304	+				-1.2
4,178,305	-				-2.2
4,178,305	-				-0.9
4,178,305	-				-0.9
4,178,305	-				-1.8
4,178,305	-				-3.0
4,178,308	+				-1.4
4,178,308	+				-1.5
4,178,308	+				-0.7
4,178,308	+				-0.7
4,178,308	+				-1.7
4,178,308	+				-0.3
4,178,309	-				-4.0
4,178,309	-				-0.7
4,178,309	-				-0.6
4,178,309	-				+0.0
4,178,309	-				-0.3
4,178,309	-				-0.9
4,178,309	-				-2.1
4,178,309	-				-0.6
4,178,309	-				-1.5
4,178,309	-				-2.3
4,178,318	+				+0.1
4,178,318	+				-1.8
4,178,318	+				+0.2
4,178,319	-				+0.1
4,178,319	-				-1.3
4,178,319	-				-0.2
4,178,319	-				-1.1
4,178,324	+				-1.1
4,178,324	+				-3.0
4,178,324	+				-2.5
4,178,324	+				-1.3
4,178,325	-				-0.4
4,178,325	-				-1.8
4,178,325	-				-2.9
4,178,327	+				-2.4
4,178,327	+				+1.1
4,178,327	+				-2.8
4,178,327	+				-0.8
4,178,327	+				-2.5
4,178,328	-				-0.1
4,178,328	-				-0.5
4,178,328	-				-0.9
4,178,395	-				+0.7
4,178,405	+				-1.1
4,178,406	-				+0.5
4,178,414	+				-2.3
4,178,415	-				-0.5
4,178,451	+				-0.9
4,178,451	+				-2.2
4,178,451	+				+1.1
4,178,451	+				-1.6
4,178,451	+				-1.9
4,178,452	-				-0.3
4,178,452	-				-1.1
4,178,452	-				+2.1
4,178,452	-				+0.9
4,178,452	-				+2.7
4,178,452	-				-0.2
4,178,452	-				+0.5
4,178,453	+				+0.2
4,178,453	+				+0.4
4,178,453	+				-0.3
4,178,453	+				-0.0
4,178,453	+				-1.3
4,178,454	-				+0.5
4,178,454	-				-0.3
4,178,454	-				-0.5
4,178,454	-				+1.0
4,178,468	+				+1.2
4,178,468	+				-1.6
4,178,468	+				-0.4
4,178,468	+				-0.3
4,178,468	+				+0.2
4,178,468	+				-1.8
4,178,469	-				-1.1
4,178,469	-				+0.5
4,178,469	-				+0.6
4,178,469	-				+0.3
4,178,469	-				-1.8
4,178,469	-				-0.1
4,178,469	-				+1.0
4,178,469	-				+0.4
4,178,469	-				+0.2
4,178,469	-				-0.9
4,178,503	+				-3.5
4,178,503	+				-0.8
4,178,504	-				+0.7
4,178,504	-				-0.3
4,178,517	+				-1.7
4,178,517	+				-1.1
4,178,518	-				-0.1
4,178,566	+				+0.4
4,178,566	+				-0.6
4,178,566	+				-1.2
4,178,566	+				+0.7
4,178,566	+				-1.6
4,178,566	+				-1.2
4,178,566	+				-0.3
4,178,567	-				-1.1
4,178,567	-				-0.2
4,178,567	-				+0.1
4,178,567	-				+0.5
4,178,567	-				+0.7
4,178,567	-				+0.6
4,178,567	-				-0.5
4,178,578	+				-2.2
4,178,578	+				-2.5
4,178,579	-				+0.1
4,178,579	-				+0.9
4,178,597	+				-1.3
4,178,597	+				-1.5
4,178,597	+				+0.5
4,178,598	-				+1.7
4,178,598	-				-0.2
4,178,598	-				-0.6
4,178,661	+				-1.1
4,178,661	+				-2.6
4,178,661	+				+0.3
4,178,661	+				-1.9
4,178,661	+				-1.3
4,178,662	-				+0.0
4,178,662	-				+0.5
4,178,734	+				-1.1
4,178,734	+				-2.5
4,178,735	-				+0.0
4,178,735	-				-1.9
4,178,735	-				-0.6
4,178,808	+				-1.7
4,178,808	+				-1.2
4,178,809	-				-1.1
4,178,838	-				+0.3
4,178,842	+				-0.6
4,178,842	+				+0.2
4,178,842	+				+0.2
4,178,842	+				+0.4
4,178,843	-				-0.1
4,178,843	-				-0.3
4,178,870	+				-1.0
4,178,871	-				-0.3
4,178,871	-				-1.1
4,178,871	-				-1.1
4,178,871	-				-0.7
4,178,871	-				-0.5
4,178,950	+		AO353_19025	0.27	-0.3
4,178,950	+		AO353_19025	0.27	-0.9
4,178,950	+		AO353_19025	0.27	-1.5
4,178,950	+		AO353_19025	0.27	-2.5
4,178,950	+		AO353_19025	0.27	-2.8
4,178,959	+		AO353_19025	0.30	-2.8
4,178,959	+		AO353_19025	0.30	+0.6
4,178,959	+		AO353_19025	0.30	-3.3
4,178,959	+		AO353_19025	0.30	-0.7
4,178,959	+		AO353_19025	0.30	+0.1
4,178,959	+		AO353_19025	0.30	-1.6
4,178,959	+		AO353_19025	0.30	-0.0
4,178,959	+		AO353_19025	0.30	+0.9
4,178,959	+		AO353_19025	0.30	-1.3
4,178,959	+		AO353_19025	0.30	-0.0
4,178,959	+		AO353_19025	0.30	-0.9
4,178,959	+		AO353_19025	0.30	-0.7
4,178,959	+		AO353_19025	0.30	-1.3
4,178,959	+		AO353_19025	0.30	+0.3
4,178,959	+		AO353_19025	0.30	+0.9
4,178,959	+		AO353_19025	0.30	+0.8
4,178,959	+		AO353_19025	0.30	-1.2
4,178,959	+		AO353_19025	0.30	+0.1
4,178,959	+		AO353_19025	0.30	+1.0
4,178,960	-		AO353_19025	0.30	-0.0
4,178,960	-		AO353_19025	0.30	-0.3
4,178,960	-		AO353_19025	0.30	-1.3
4,178,960	-		AO353_19025	0.30	-0.5
4,178,960	-		AO353_19025	0.30	-0.6
4,178,960	-		AO353_19025	0.30	+0.3
4,178,960	-		AO353_19025	0.30	+0.8
4,178,960	-		AO353_19025	0.30	+0.7
4,178,960	-		AO353_19025	0.30	-0.9
4,178,960	-		AO353_19025	0.30	-1.1
4,178,960	-		AO353_19025	0.30	-0.3
4,178,960	-		AO353_19025	0.30	-1.9
4,178,962	-		AO353_19025	0.31	-1.5
4,178,962	-		AO353_19025	0.31	+1.0
4,178,962	-		AO353_19025	0.31	-1.3
4,178,962	-		AO353_19025	0.31	-0.1
4,178,988	+		AO353_19025	0.40	-0.9
4,178,988	+		AO353_19025	0.40	-1.6
4,178,988	+		AO353_19025	0.40	+0.3
4,178,989	-		AO353_19025	0.40	-0.1
4,178,989	-		AO353_19025	0.40	+0.1
4,178,989	-		AO353_19025	0.40	-2.5
4,178,992	+		AO353_19025	0.41	+0.3
4,178,992	+		AO353_19025	0.41	-0.9
4,178,992	+		AO353_19025	0.41	-2.0
4,178,992	+		AO353_19025	0.41	+0.2
4,178,992	+		AO353_19025	0.41	+0.3
4,178,992	+		AO353_19025	0.41	-2.9
4,178,993	-		AO353_19025	0.42	+0.2
4,178,993	-		AO353_19025	0.42	-0.3
4,178,993	-		AO353_19025	0.42	-1.2
4,178,993	-		AO353_19025	0.42	-0.3
4,178,993	-		AO353_19025	0.42	-0.1
4,178,993	-		AO353_19025	0.42	+0.5
4,178,993	-		AO353_19025	0.42	-0.1
4,178,993	-		AO353_19025	0.42	-0.7
4,178,997	+		AO353_19025	0.43	-0.9
4,178,997	+		AO353_19025	0.43	+0.1
4,178,997	+		AO353_19025	0.43	+1.7
4,178,997	+		AO353_19025	0.43	-2.3
4,178,997	+		AO353_19025	0.43	-2.6
4,178,998	-		AO353_19025	0.44	-1.1
4,178,998	-		AO353_19025	0.44	+0.1
4,179,064	+		AO353_19025	0.67	-1.4
4,179,065	-		AO353_19025	0.67	-0.9
4,179,065	-		AO353_19025	0.67	+0.3
4,179,065	-		AO353_19025	0.67	-0.9
4,179,106	+		AO353_19025	0.82	-1.2
4,179,106	+		AO353_19025	0.82	-2.1
4,179,106	+		AO353_19025	0.82	-2.0
4,179,106	+		AO353_19025	0.82	-2.6
4,179,106	+		AO353_19025	0.82	-0.3
4,179,106	+				+0.4
4,179,106	+		AO353_19025	0.82	-1.2
4,179,107	-		AO353_19025	0.82	-1.3
4,179,107	-		AO353_19025	0.82	+0.4
4,179,118	+		AO353_19025	0.86	-1.7
4,179,118	+		AO353_19025	0.86	+0.5
4,179,118	+		AO353_19025	0.86	+0.1
4,179,118	+		AO353_19025	0.86	+1.6
4,179,118	+		AO353_19025	0.86	-1.2
4,179,118	+		AO353_19025	0.86	-0.5
4,179,119	-		AO353_19025	0.87	+1.5
4,179,119	-		AO353_19025	0.87	+0.0
4,179,119	-		AO353_19025	0.87	+0.3
4,179,119	-		AO353_19025	0.87	+0.5
4,179,119	-		AO353_19025	0.87	-0.3
4,179,188	+				-1.5
4,179,330	-		AO353_19030	0.10	-0.6
4,179,330	-		AO353_19030	0.10	+0.5
4,179,569	+		AO353_19030	0.32	-3.6
4,179,569	+		AO353_19030	0.32	-2.7
4,179,570	-		AO353_19030	0.32	-0.3
4,179,570	-		AO353_19030	0.32	-0.3
4,179,570	-		AO353_19030	0.32	-0.6
4,179,570	-		AO353_19030	0.32	-1.3
4,179,570	-		AO353_19030	0.32	-1.9
4,179,611	+		AO353_19030	0.36	+0.7
4,179,839	+		AO353_19030	0.57	-0.1
4,179,840	-				-0.6
4,179,840	-		AO353_19030	0.58	-0.8
4,179,840	-		AO353_19030	0.58	-2.4
4,179,960	-		AO353_19030	0.69	+0.1
4,179,996	+		AO353_19030	0.72	-1.9
4,179,996	+		AO353_19030	0.72	-1.7
4,179,996	+		AO353_19030	0.72	-0.3
4,179,997	-		AO353_19030	0.72	-1.1
4,179,997	-		AO353_19030	0.72	-1.5
4,179,997	-		AO353_19030	0.72	+0.0
4,179,997	-		AO353_19030	0.72	-2.1
4,180,013	+		AO353_19030	0.74	-1.6
4,180,014	-		AO353_19030	0.74	-0.9
4,180,014	-		AO353_19030	0.74	-0.5
4,180,031	+		AO353_19030	0.75	-0.3
4,180,031	+		AO353_19030	0.75	-0.9
4,180,031	+		AO353_19030	0.75	-0.6
4,180,031	+		AO353_19030	0.75	+0.4
4,180,031	+		AO353_19030	0.75	-0.4
4,180,031	+		AO353_19030	0.75	+1.0
4,180,031	+		AO353_19030	0.75	-1.1
4,180,032	-		AO353_19030	0.75	-0.5
4,180,061	-		AO353_19030	0.78	-1.7
4,180,061	-		AO353_19030	0.78	-0.5
4,180,079	+		AO353_19030	0.80	-2.4
4,180,079	+		AO353_19030	0.80	+2.0
4,180,079	+		AO353_19030	0.80	+0.1
4,180,079	+		AO353_19030	0.80	-0.8
4,180,079	+		AO353_19030	0.80	-0.3
4,180,218	+				-0.3
4,180,270	+				-1.0
4,180,271	-				-1.9
4,180,286	-				-0.6
4,180,286	-				-2.8
4,180,302	+				-2.1
4,180,303	-				-1.6
4,180,303	-				-1.3
4,180,303	-				-1.6
4,180,303	-				-0.9
4,180,303	-				-0.2
4,180,303	-				-0.0
4,180,364	+				-0.1
4,180,364	+				+0.8
4,180,365	-				-0.4
4,180,365	-				-0.6
4,180,365	-				+0.3
4,180,365	-				-0.6
4,180,365	-				-1.3
4,180,430	+				-1.2
4,180,442	-				-0.4
4,180,477	+				-0.4
4,180,478	-				-0.2
4,180,601	+		AO353_19035	0.37	+0.2
4,180,601	+		AO353_19035	0.37	+0.5
4,180,601	+		AO353_19035	0.37	-2.0
4,180,602	-		AO353_19035	0.38	+0.3
4,180,602	-		AO353_19035	0.38	+0.4
4,180,602	-		AO353_19035	0.38	-0.3
4,180,643	-		AO353_19035	0.47	+0.6
4,180,675	+		AO353_19035	0.54	-0.1
4,180,676	-		AO353_19035	0.55	-0.2
4,180,676	-		AO353_19035	0.55	+0.1
4,180,684	+		AO353_19035	0.56	-0.0
4,180,684	+		AO353_19035	0.56	+0.6
4,180,684	+		AO353_19035	0.56	+0.2
4,180,685	-		AO353_19035	0.57	-0.8
4,180,685	-		AO353_19035	0.57	+0.5
4,180,753	+				-1.1
4,180,753	+		AO353_19035	0.72	-0.8
4,180,754	-		AO353_19035	0.73	-0.1
4,180,754	-		AO353_19035	0.73	-0.3
4,180,754	-		AO353_19035	0.73	+0.1
4,180,781	+		AO353_19035	0.79	-2.8
4,180,781	+		AO353_19035	0.79	+0.7
4,180,781	+		AO353_19035	0.79	-0.0
4,180,782	-		AO353_19035	0.79	+0.2
4,180,782	-		AO353_19035	0.79	-1.5
4,180,782	-		AO353_19035	0.79	+1.4
4,180,805	+		AO353_19035	0.84	-0.6
4,180,806	-		AO353_19035	0.85	-0.9
4,180,806	-		AO353_19035	0.85	+0.7
4,180,806	-		AO353_19035	0.85	+0.5
4,180,827	+		AO353_19035	0.90	-0.5
4,180,828	-				+0.4
4,180,828	-				-0.0
4,180,828	-				+1.1
4,180,859	+				-0.2
4,180,859	+				-1.0
4,180,859	+				+0.3
4,180,859	+				-0.8
4,180,859	+				+1.3
4,180,860	-				-0.2
4,180,860	-				+0.5
4,180,860	-				+0.1
4,180,860	-				-2.2
4,180,860	-				+1.1
4,180,918	-		AO353_19040	0.12	+2.0
4,180,919	+		AO353_19040	0.13	+1.0
4,180,919	+		AO353_19040	0.13	-1.9
4,180,919	+		AO353_19040	0.13	-2.4
4,180,919	+		AO353_19040	0.13	+0.5
4,180,919	+		AO353_19040	0.13	-0.7
4,180,919	+		AO353_19040	0.13	-1.2
4,180,919	+		AO353_19040	0.13	-0.5
4,180,919	+		AO353_19040	0.13	+1.3
4,180,919	+		AO353_19040	0.13	+1.2
4,180,919	+		AO353_19040	0.13	-1.8
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	-0.0
4,180,919	+		AO353_19040	0.13	+0.5
4,180,919	+		AO353_19040	0.13	+0.5
4,180,919	+		AO353_19040	0.13	-0.0
4,180,919	+		AO353_19040	0.13	-0.3
4,180,919	+		AO353_19040	0.13	-0.5
4,180,919	+		AO353_19040	0.13	+0.4
4,180,919	+		AO353_19040	0.13	-0.6
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