Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18945

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,163,497	+		AO353_18940	0.46	-1.1
4,163,497	+		AO353_18940	0.46	+0.9
4,163,497	+		AO353_18940	0.46	+2.0
4,163,498	-		AO353_18940	0.46	+1.7
4,163,663	+		AO353_18940	0.62	+0.6
4,163,664	-		AO353_18940	0.62	+0.0
4,163,664	-		AO353_18940	0.62	+0.2
4,163,734	+		AO353_18940	0.69	-1.0
4,163,735	-		AO353_18940	0.69	-0.5
4,163,735	-		AO353_18940	0.69	+1.0
4,163,847	+		AO353_18940	0.80	-1.5
4,163,847	+		AO353_18940	0.80	+0.7
4,163,848	-		AO353_18940	0.80	-1.1
4,163,848	-		AO353_18940	0.80	-0.4
4,163,848	-		AO353_18940	0.80	-0.5
4,163,848	-		AO353_18940	0.80	+1.3
4,163,857	+		AO353_18940	0.81	-0.1
4,163,858	-		AO353_18940	0.81	+0.0
4,163,909	-		AO353_18940	0.86	+0.1
4,163,909	-		AO353_18940	0.86	+0.0
4,163,909	-		AO353_18940	0.86	-0.3
4,163,912	+		AO353_18940	0.86	+0.5
4,164,004	+				+0.3
4,164,004	+				-0.6
4,164,005	-				-0.4
4,164,005	-				-0.1
4,164,175	+				+1.5
4,164,175	+				+0.3
4,164,175	+				-0.9
4,164,175	+				+1.4
4,164,176	-				-0.3
4,164,176	-				-1.1
4,164,176	-				-2.6
4,164,176	-				+0.7
4,164,191	-				+0.4
4,164,191	-				-0.9
4,164,192	+				+1.2
4,164,192	+				-0.9
4,164,192	+				+1.3
4,164,192	+				+1.3
4,164,192	+				+0.1
4,164,192	+				-0.2
4,164,192	+				+0.2
4,164,192	+				-0.2
4,164,193	-				+1.7
4,164,193	-				+0.6
4,164,193	-				-0.3
4,164,193	-				-1.9
4,164,193	-				-0.5
4,164,239	+				-0.4
4,164,239	+				+1.1
4,164,239	+				+0.5
4,164,240	-				-0.7
4,164,240	-				+0.4
4,164,240	-				-1.0
4,164,258	+				-0.3
4,164,259	-				+0.7
4,164,260	+				+0.9
4,164,260	+				+0.4
4,164,431	+		AO353_18945	0.55	-0.1
4,164,431	+		AO353_18945	0.55	-0.4
4,164,431	+		AO353_18945	0.55	-1.1
4,164,488	+		AO353_18945	0.75	-1.2
4,164,489	-		AO353_18945	0.76	-1.5
4,164,527	+		AO353_18945	0.89	-1.0
4,164,527	+		AO353_18945	0.89	-1.5
4,164,527	+		AO353_18945	0.89	+1.2
4,164,527	+		AO353_18945	0.89	+1.1
4,164,528	-		AO353_18945	0.90	+0.5
4,164,528	-		AO353_18945	0.90	-0.3
4,164,528	-		AO353_18945	0.90	+1.1
4,164,528	-		AO353_18945	0.90	-0.6
4,164,528	-		AO353_18945	0.90	+1.6
4,164,528	-		AO353_18945	0.90	+0.4
4,164,529	+				-1.1
4,164,611	+				-0.2
4,164,612	-				-0.2
4,164,903	+		AO353_18950	0.32	-0.7
4,164,903	+		AO353_18950	0.32	+0.1
4,164,903	+		AO353_18950	0.32	-0.7
4,164,903	+		AO353_18950	0.32	+0.2
4,164,904	-		AO353_18950	0.33	-2.2
4,164,904	-		AO353_18950	0.33	-0.1
4,164,966	+		AO353_18950	0.41	-0.0
4,164,967	-		AO353_18950	0.41	+0.7
4,165,003	+		AO353_18950	0.45	+1.7
4,165,003	+		AO353_18950	0.45	-0.2
4,165,003	+		AO353_18950	0.45	-0.2
4,165,003	+		AO353_18950	0.45	+0.5
4,165,003	+		AO353_18950	0.45	+0.4
4,165,004	-		AO353_18950	0.46	-1.2
4,165,004	-		AO353_18950	0.46	+0.0
4,165,004	-		AO353_18950	0.46	-1.5
4,165,004	-		AO353_18950	0.46	-1.0
4,165,004	-		AO353_18950	0.46	-0.0
4,165,185	+		AO353_18950	0.69	+2.0
4,165,453	+				-2.0
4,165,454	-				+0.9
4,165,454	-				-1.3
4,165,478	+				+0.5
4,165,478	+				+0.6
4,165,478	+				-0.2
4,165,478	+				+1.1
4,165,479	-				+0.6
4,165,479	-				+2.7
4,165,479	-				-0.6
4,165,487	+				-0.9
4,165,487	+				-1.1
4,165,488	-				-0.0
4,165,488	-				+0.4
4,165,488	-				+0.7
4,165,488	-				+1.7
4,165,488	-				-0.8
4,165,488	-				-3.3
4,165,488	-				+0.1
4,165,508	-				-0.3
4,165,508	-				-1.6
4,165,508	-				-1.4