Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18725

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,119,305	+		AO353_18720	0.51	+1.2
4,119,600	+		AO353_18720	0.71	-0.2
4,119,600	+		AO353_18720	0.71	-0.7
4,119,600	+		AO353_18720	0.71	-0.8
4,119,600	+		AO353_18720	0.71	+0.7
4,119,600	+		AO353_18720	0.71	+1.3
4,119,600	+		AO353_18720	0.71	-0.8
4,119,600	+		AO353_18720	0.71	-0.1
4,119,600	+		AO353_18720	0.71	+1.2
4,119,600	+		AO353_18720	0.71	+1.2
4,119,600	+		AO353_18720	0.71	+0.4
4,119,600	+		AO353_18720	0.71	+0.3
4,119,600	+		AO353_18720	0.71	-1.6
4,119,600	+		AO353_18720	0.71	-0.3
4,119,600	+		AO353_18720	0.71	+1.2
4,119,601	-		AO353_18720	0.72	-0.0
4,119,601	-		AO353_18720	0.72	+0.4
4,119,601	-		AO353_18720	0.72	+0.3
4,119,601	-		AO353_18720	0.72	+0.3
4,119,601	-		AO353_18720	0.72	+0.8
4,119,601	-		AO353_18720	0.72	-1.2
4,119,601	-		AO353_18720	0.72	-1.6
4,119,601	-		AO353_18720	0.72	+0.6
4,119,601	-		AO353_18720	0.72	-0.1
4,119,601	-		AO353_18720	0.72	+1.3
4,119,601	-		AO353_18720	0.72	-0.2
4,119,601	-		AO353_18720	0.72	+0.3
4,119,632	+		AO353_18720	0.74	+0.2
4,119,727	+		AO353_18720	0.80	-1.3
4,119,727	+		AO353_18720	0.80	+1.8
4,119,727	+		AO353_18720	0.80	-1.1
4,119,727	+		AO353_18720	0.80	+0.2
4,119,727	+		AO353_18720	0.80	+1.2
4,119,727	+		AO353_18720	0.80	-0.7
4,119,727	+		AO353_18720	0.80	-1.0
4,119,728	-		AO353_18720	0.81	+0.3
4,119,728	-		AO353_18720	0.81	-0.2
4,119,728	-		AO353_18720	0.81	-0.1
4,119,728	-		AO353_18720	0.81	-2.2
4,119,728	-		AO353_18720	0.81	+0.4
4,119,728	-		AO353_18720	0.81	+0.5
4,119,728	-		AO353_18720	0.81	+1.1
4,119,728	-		AO353_18720	0.81	+0.3
4,119,728	-		AO353_18720	0.81	+1.5
4,119,733	+		AO353_18720	0.81	-1.4
4,119,733	+		AO353_18720	0.81	+0.8
4,119,733	+		AO353_18720	0.81	-0.1
4,119,733	+		AO353_18720	0.81	-1.1
4,119,733	+		AO353_18720	0.81	+0.9
4,119,733	+		AO353_18720	0.81	+0.6
4,119,733	+		AO353_18720	0.81	+0.0
4,119,733	+		AO353_18720	0.81	+0.8
4,119,733	+		AO353_18720	0.81	+0.8
4,119,733	+		AO353_18720	0.81	+0.5
4,119,734	-		AO353_18720	0.81	+1.3
4,119,734	-		AO353_18720	0.81	-0.1
4,119,734	-		AO353_18720	0.81	-0.1
4,119,734	-		AO353_18720	0.81	-0.1
4,119,734	-		AO353_18720	0.81	+0.4
4,119,734	-		AO353_18720	0.81	-1.4
4,119,734	-		AO353_18720	0.81	+0.6
4,119,734	-		AO353_18720	0.81	-0.1
4,119,734	-		AO353_18720	0.81	+0.4
4,119,734	-		AO353_18720	0.81	+1.8
4,119,734	-		AO353_18720	0.81	-1.9
4,119,734	-		AO353_18720	0.81	+0.8
4,119,734	-		AO353_18720	0.81	-1.4
4,119,734	-		AO353_18720	0.81	+1.2
4,119,990	+				-0.7
4,119,990	+				+0.9
4,119,991	-				-1.2
4,119,991	-				+0.1
4,119,991	-				+1.2
4,119,993	+				+1.2
4,119,994	-				-0.2
4,119,994	-				-0.3
4,120,045	+				-0.4
4,120,061	-				+0.6
4,120,061	-				-0.9
4,120,061	-				-2.7
4,120,061	-				+0.4
4,120,061	-				+0.8
4,120,110	+				+0.8
4,120,110	+				-0.1
4,120,110	+				+0.8
4,120,141	+				+0.7
4,120,142	-				+0.2
4,120,142	-				+1.2
4,120,142	-				+3.3
4,120,142	-				+1.0
4,120,142	-				+0.5
4,120,185	-				+0.2
4,120,185	-				+1.2
4,120,195	+				+0.8
4,120,258	+		AO353_18725	0.11	-0.4
4,120,258	+		AO353_18725	0.11	-0.1
4,120,259	-		AO353_18725	0.11	+1.3
4,120,259	-		AO353_18725	0.11	+4.3
4,120,259	-				+1.0
4,120,259	-		AO353_18725	0.11	+0.3
4,120,259	-		AO353_18725	0.11	-0.2
4,120,319	+		AO353_18725	0.23	+0.7
4,120,319	+		AO353_18725	0.23	-1.7
4,120,319	+		AO353_18725	0.23	+1.0
4,120,320	-		AO353_18725	0.24	-0.2
4,120,324	+		AO353_18725	0.24	+0.7
4,120,325	-		AO353_18725	0.25	+0.2
4,120,325	-		AO353_18725	0.25	+2.2
4,120,325	-		AO353_18725	0.25	+0.9
4,120,325	-		AO353_18725	0.25	+1.1
4,120,372	+				+1.8
4,120,394	+		AO353_18725	0.38	-0.7
4,120,394	+		AO353_18725	0.38	-0.8
4,120,395	-		AO353_18725	0.39	-0.3
4,120,395	-		AO353_18725	0.39	+2.2
4,120,427	+		AO353_18725	0.45	+0.3
4,120,428	-		AO353_18725	0.45	+1.4
4,120,428	-		AO353_18725	0.45	+0.9
4,120,428	-		AO353_18725	0.45	-2.2
4,120,428	-		AO353_18725	0.45	+0.4
4,120,428	-		AO353_18725	0.45	-0.7
4,120,428	-		AO353_18725	0.45	+1.7
4,120,451	+		AO353_18725	0.50	+0.1
4,120,451	+		AO353_18725	0.50	+1.3
4,120,451	+		AO353_18725	0.50	-2.4
4,120,452	-		AO353_18725	0.50	-1.1
4,120,452	-		AO353_18725	0.50	+3.2
4,120,452	-		AO353_18725	0.50	+1.1
4,120,452	-		AO353_18725	0.50	-1.6
4,120,516	+		AO353_18725	0.63	+0.8
4,120,516	+		AO353_18725	0.63	-0.2
4,120,517	-		AO353_18725	0.63	+1.0
4,120,700	+				-0.8
4,120,701	-				+2.3
4,120,701	-				+1.2
4,120,783	-				-0.7
4,120,823	+		AO353_18730	0.11	+1.6
4,120,823	+		AO353_18730	0.11	+1.1
4,120,824	-				+1.4
4,120,824	-		AO353_18730	0.12	+1.2
4,120,824	-		AO353_18730	0.12	+1.8
4,120,824	-		AO353_18730	0.12	-0.9
4,120,824	-		AO353_18730	0.12	+0.8
4,120,824	-		AO353_18730	0.12	-0.3
4,120,985	+		AO353_18730	0.28	+0.1
4,120,986	-		AO353_18730	0.28	-0.5
4,120,986	-		AO353_18730	0.28	+0.9
4,120,986	-		AO353_18730	0.28	-0.2
4,120,986	-		AO353_18730	0.28	+0.2
4,120,986	-		AO353_18730	0.28	+0.8
4,121,000	+		AO353_18730	0.30	+1.0
4,121,000	+		AO353_18730	0.30	+0.8
4,121,001	-		AO353_18730	0.30	-0.8
4,121,001	-				+1.2
4,121,005	-		AO353_18730	0.30	+0.2
4,121,005	-		AO353_18730	0.30	+1.3
4,121,091	+		AO353_18730	0.39	-0.7
4,121,091	+		AO353_18730	0.39	-0.8
4,121,092	-		AO353_18730	0.39	-0.1
4,121,243	+		AO353_18730	0.55	+1.8
4,121,243	+		AO353_18730	0.55	-1.1
4,121,244	-		AO353_18730	0.55	+2.5
4,121,366	+		AO353_18730	0.67	+0.4