Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18610

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,092,935	+		AO353_18600	0.81	-0.9
4,093,017	+				+1.2
4,093,017	+				+0.6
4,093,043	+				+1.0
4,093,043	+				-0.2
4,093,084	-				-0.6
4,093,093	+				+0.6
4,093,093	+				-1.0
4,093,093	+				-0.2
4,093,093	+				-0.0
4,093,093	+				-1.5
4,093,093	+				+0.0
4,093,094	-				-0.2
4,093,094	-				+0.2
4,093,094	-				+2.1
4,093,094	-				+0.5
4,093,094	-				+3.8
4,093,094	-				-0.7
4,093,130	+				+0.5
4,093,131	-				-0.3
4,093,131	-				+0.5
4,093,150	+				-1.2
4,093,150	+				-0.2
4,093,150	+				-0.2
4,093,150	+				-0.8
4,093,150	+				-0.5
4,093,150	+				+0.5
4,093,150	+				-1.2
4,093,150	+				-0.3
4,093,151	-				-1.0
4,093,151	-				+0.4
4,093,151	-				-1.7
4,093,151	-				-1.4
4,093,151	-				-0.2
4,093,151	-				+1.4
4,093,224	+		AO353_18605	0.13	-1.0
4,093,224	+		AO353_18605	0.13	-0.2
4,093,225	-		AO353_18605	0.13	+1.5
4,093,227	+		AO353_18605	0.13	+2.4
4,093,227	+		AO353_18605	0.13	+0.8
4,093,227	+		AO353_18605	0.13	+0.0
4,093,247	+		AO353_18605	0.16	-1.1
4,093,248	-		AO353_18605	0.16	-0.4
4,093,284	+		AO353_18605	0.22	-1.2
4,093,284	+		AO353_18605	0.22	-1.5
4,093,284	+		AO353_18605	0.22	+0.6
4,093,285	-		AO353_18605	0.22	+1.8
4,093,285	-		AO353_18605	0.22	+0.4
4,093,285	-		AO353_18605	0.22	-1.6
4,093,285	-		AO353_18605	0.22	-0.3
4,093,311	+		AO353_18605	0.26	-1.4
4,093,311	+		AO353_18605	0.26	+1.2
4,093,312	-		AO353_18605	0.26	+0.4
4,093,312	-		AO353_18605	0.26	+0.6
4,093,491	+		AO353_18605	0.52	+1.1
4,093,491	+		AO353_18605	0.52	-0.6
4,093,491	+		AO353_18605	0.52	+0.9
4,093,492	-		AO353_18605	0.52	+0.5
4,093,492	-		AO353_18605	0.52	+1.2
4,093,492	-		AO353_18605	0.52	-0.2
4,093,734	+		AO353_18605	0.88	-0.8
4,093,734	+		AO353_18605	0.88	+0.0
4,093,735	-		AO353_18605	0.88	-0.8
4,093,735	-		AO353_18605	0.88	+1.0
4,093,735	-		AO353_18605	0.88	-0.2
4,093,796	-				+0.7
4,093,815	+				-1.4
4,093,815	+				+0.5
4,093,815	+				+1.8
4,093,815	+				-1.5
4,093,815	+				-1.2
4,093,815	+				+1.3
4,093,816	-				+1.8
4,093,816	-				+0.4
4,093,816	-				+2.1
4,093,816	-				+1.2
4,093,838	+				-0.7
4,093,839	-				+0.5
4,093,922	+				+1.1
4,094,244	+		AO353_18610	0.37	+0.1
4,094,244	+		AO353_18610	0.37	+0.1
4,094,244	+		AO353_18610	0.37	-1.8
4,094,245	-		AO353_18610	0.37	+0.6
4,094,245	-		AO353_18610	0.37	+1.2
4,094,245	-		AO353_18610	0.37	+2.0
4,094,312	+		AO353_18610	0.43	-0.0
4,094,550	+		AO353_18610	0.65	+1.1
4,094,550	+		AO353_18610	0.65	-0.2
4,094,550	+		AO353_18610	0.65	+1.7
4,094,550	+		AO353_18610	0.65	+1.2
4,094,550	+		AO353_18610	0.65	-0.6
4,094,550	+		AO353_18610	0.65	-0.5
4,094,551	-		AO353_18610	0.65	+0.4
4,094,551	-		AO353_18610	0.65	+1.2
4,094,630	+		AO353_18610	0.72	+0.8
4,094,819	+		AO353_18610	0.89	-1.5
4,094,820	-		AO353_18610	0.89	+1.5
4,094,943	+				-1.8
4,094,943	+				-1.0
4,095,001	+				+0.6
4,095,001	+				+0.4
4,095,001	+				-1.7
4,095,002	-				-0.3
4,095,002	-				+1.0
4,095,002	-				+1.1
4,095,002	-				-0.1
4,095,021	+				+0.6
4,095,181	+		AO353_18615	0.18	+0.8
4,095,193	+		AO353_18615	0.19	+1.0
4,095,193	+		AO353_18615	0.19	-1.2
4,095,193	+		AO353_18615	0.19	-0.8
4,095,193	+		AO353_18615	0.19	-0.7
4,095,193	+		AO353_18615	0.19	-0.1
4,095,194	-		AO353_18615	0.19	+0.7
4,095,194	-		AO353_18615	0.19	+1.6
4,095,194	-		AO353_18615	0.19	-1.5
4,095,194	-		AO353_18615	0.19	+1.0
4,095,347	+		AO353_18615	0.30	-0.2
4,095,347	+		AO353_18615	0.30	+1.4
4,095,700	+		AO353_18615	0.58	-0.0
4,095,700	+		AO353_18615	0.58	-1.0
4,095,700	+		AO353_18615	0.58	+1.4
4,095,700	+		AO353_18615	0.58	+0.9
4,095,700	+		AO353_18615	0.58	+0.2
4,095,700	+		AO353_18615	0.58	+1.8
4,095,701	-		AO353_18615	0.58	+0.9
4,095,701	-		AO353_18615	0.58	-1.4
4,095,701	-		AO353_18615	0.58	-1.1
4,095,701	-		AO353_18615	0.58	+1.6
4,095,774	+		AO353_18615	0.63	+0.8
4,095,774	+		AO353_18615	0.63	-1.7
4,095,774	+		AO353_18615	0.63	+1.5
4,095,775	-		AO353_18615	0.63	+0.2
4,095,775	-		AO353_18615	0.63	-1.5
4,095,775	-		AO353_18615	0.63	-0.1
4,095,775	-		AO353_18615	0.63	+2.1
4,095,775	-		AO353_18615	0.63	+0.5
4,095,830	-		AO353_18615	0.68	+0.1
4,095,830	-		AO353_18615	0.68	+1.4
4,095,867	+		AO353_18615	0.71	+0.3
4,095,868	-		AO353_18615	0.71	-0.0
4,095,906	+		AO353_18615	0.74	+0.4
4,095,906	+		AO353_18615	0.74	-0.9
4,095,907	-		AO353_18615	0.74	+2.0