Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18430

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
4,058,482	+		AO353_18420	0.90	+0.6
4,058,483	-				-1.1
4,058,508	+				-0.2
4,058,534	+				-3.8
4,058,534	+				-0.7
4,058,534	+				-0.5
4,058,535	-				-0.5
4,058,535	-				+0.3
4,058,535	-				+0.3
4,058,535	-				+2.4
4,058,591	+				+0.8
4,058,592	-		AO353_18425	0.10	+1.8
4,058,592	-		AO353_18425	0.10	+0.5
4,058,592	-		AO353_18425	0.10	+0.1
4,058,887	-		AO353_18425	0.60	-0.2
4,059,026	+		AO353_18425	0.84	+0.4
4,059,026	+		AO353_18425	0.84	+1.4
4,059,027	-		AO353_18425	0.84	+2.3
4,059,044	+		AO353_18425	0.87	-1.1
4,059,044	+		AO353_18425	0.87	+1.2
4,059,044	+		AO353_18425	0.87	+0.8
4,059,044	+		AO353_18425	0.87	-1.0
4,059,044	+		AO353_18425	0.87	-0.3
4,059,045	-		AO353_18425	0.87	+0.3
4,059,045	-		AO353_18425	0.87	+0.3
4,059,045	-		AO353_18425	0.87	+0.4
4,059,045	-		AO353_18425	0.87	+0.0
4,059,045	-		AO353_18425	0.87	+0.5
4,059,100	+				+0.7
4,059,100	+				-1.5
4,059,129	+				-0.3
4,059,141	-				-1.9
4,059,142	+				-0.3
4,059,142	+				+0.3
4,059,142	+				+1.1
4,059,142	+				-1.6
4,059,142	+				+0.8
4,059,142	+				+0.3
4,059,142	+				+0.4
4,059,142	+				+1.0
4,059,142	+				+1.3
4,059,142	+				-0.6
4,059,143	-				-0.2
4,059,143	-				-1.2
4,059,143	-				-1.3
4,059,143	-				-1.2
4,059,143	-				-0.5
4,059,143	-				+0.4
4,059,143	-				+2.8
4,059,143	-				+0.8
4,059,143	-				+0.0
4,059,143	-				-0.5
4,059,143	-				+1.2
4,059,143	-				-1.3
4,059,143	-				+0.8
4,059,143	-				+0.7
4,059,157	+				-0.0
4,059,218	+				-0.5
4,059,218	+				-0.9
4,059,260	+				-2.0
4,059,260	+				+1.2
4,059,298	+				+0.8
4,059,299	-				-1.3
4,059,300	+				-1.0
4,059,300	+				+0.2
4,059,300	+				+0.4
4,059,300	+				-2.7
4,059,300	+				+0.7
4,059,301	-				+0.4
4,059,301	-				-0.3
4,059,409	+				-0.1
4,059,410	-				-1.7
4,059,410	-				-0.9
4,059,767	+		AO353_18430	0.16	-1.3
4,059,768	-		AO353_18430	0.16	+0.3
4,059,893	+		AO353_18430	0.22	+1.1
4,059,893	+		AO353_18430	0.22	-0.3
4,059,894	-		AO353_18430	0.22	-0.2
4,060,053	-		AO353_18430	0.29	+0.5
4,060,133	+		AO353_18430	0.33	-0.5
4,060,134	-		AO353_18430	0.33	+0.8
4,060,134	-		AO353_18430	0.33	+0.8
4,060,164	+		AO353_18430	0.34	-1.6
4,060,164	+		AO353_18430	0.34	+1.0
4,060,164	+		AO353_18430	0.34	-0.7
4,060,164	+		AO353_18430	0.34	+0.7
4,060,164	+		AO353_18430	0.34	+1.6
4,060,165	-		AO353_18430	0.34	+0.1
4,060,367	+		AO353_18430	0.44	-1.0
4,060,367	+		AO353_18430	0.44	-1.5
4,060,367	+		AO353_18430	0.44	+0.4
4,060,367	+		AO353_18430	0.44	+0.4
4,060,367	+		AO353_18430	0.44	-1.0
4,060,367	+		AO353_18430	0.44	+1.0
4,060,368	-		AO353_18430	0.44	-0.2
4,060,368	-		AO353_18430	0.44	+0.1
4,060,427	+		AO353_18430	0.47	-2.4
4,060,428	-		AO353_18430	0.47	+0.3
4,060,574	+		AO353_18430	0.54	+0.3
4,060,574	+		AO353_18430	0.54	-0.2
4,060,574	+		AO353_18430	0.54	+1.5
4,060,574	+		AO353_18430	0.54	+0.6
4,060,574	+		AO353_18430	0.54	-0.2
4,060,575	-		AO353_18430	0.54	-1.6
4,060,682	+		AO353_18430	0.59	-0.5
4,060,683	-		AO353_18430	0.59	-2.7
4,060,683	-		AO353_18430	0.59	-0.5
4,060,782	+		AO353_18430	0.63	+1.1
4,060,782	+		AO353_18430	0.63	-0.7
4,060,783	-		AO353_18430	0.63	+0.1
4,060,893	+		AO353_18430	0.68	-0.8
4,061,087	+		AO353_18430	0.78	-0.5
4,061,087	+		AO353_18430	0.78	-1.7
4,061,088	-		AO353_18430	0.78	-2.0
4,061,345	+		AO353_18430	0.90	-0.2
4,061,346	-		AO353_18430	0.90	+2.8
4,061,346	-		AO353_18430	0.90	+0.4
4,061,346	-		AO353_18430	0.90	+1.1
4,061,346	-		AO353_18430	0.90	-0.2
4,061,346	-		AO353_18430	0.90	+1.8
4,061,522	+				-0.1
4,061,523	-				-0.7
4,061,523	-				-0.6
4,061,523	-				+0.7
4,061,523	-				-1.6
4,061,561	+				-1.9
4,061,582	+				+0.7
4,061,593	+				+2.5
4,061,594	-				+0.8
4,061,611	+				-0.7
4,061,611	+				+0.0
4,061,631	-				-1.0
4,061,639	-				+1.3
4,061,641	+				-1.0
4,061,642	-				+0.3
4,061,642	-				+2.0
4,061,657	-				+0.6
4,061,657	-				+1.5
4,061,669	-				+0.4
4,062,061	+		AO353_18435	0.87	+0.8
4,062,061	+		AO353_18435	0.87	+0.1
4,062,061	+		AO353_18435	0.87	-1.3
4,062,062	-		AO353_18435	0.87	-0.5
4,062,062	-		AO353_18435	0.87	+0.1
4,062,062	-		AO353_18435	0.87	+0.8
4,062,062	-		AO353_18435	0.87	+2.4
4,062,073	+				-0.2
4,062,073	+		AO353_18435	0.89	+0.3
4,062,073	+		AO353_18435	0.89	+1.2
4,062,073	+		AO353_18435	0.89	+1.2
4,062,073	+		AO353_18435	0.89	+0.5
4,062,073	+		AO353_18435	0.89	-0.7
4,062,073	+		AO353_18435	0.89	+1.1
4,062,073	+		AO353_18435	0.89	-0.3
4,062,073	+		AO353_18435	0.89	+0.9
4,062,073	+		AO353_18435	0.89	+0.1
4,062,073	+		AO353_18435	0.89	+0.7
4,062,074	-		AO353_18435	0.90	+1.4
4,062,074	-		AO353_18435	0.90	+1.6
4,062,074	-		AO353_18435	0.90	+0.1
4,062,074	-		AO353_18435	0.90	+0.8
4,062,074	-		AO353_18435	0.90	+1.5
4,062,074	-		AO353_18435	0.90	+1.0
4,062,074	-		AO353_18435	0.90	+1.0
4,062,123	+				+1.3
4,062,124	-				+0.3
4,062,164	+				-0.7
4,062,164	+				+1.3
4,062,164	+				-1.5
4,062,164	+				+0.6
4,062,164	+				+0.8
4,062,164	+				+0.1
4,062,164	+				+1.1
4,062,165	-				+1.2
4,062,165	-				-0.3
4,062,165	-				-0.5
4,062,166	+				+0.2
4,062,166	+				+1.0
4,062,166	+				-0.3
4,062,166	+				-0.8
4,062,166	+				-0.5
4,062,166	+				+0.0
4,062,167	-				-0.2
4,062,167	-				+0.1
4,062,167	-				+3.0
4,062,167	-				-2.7
4,062,167	-				+0.1
4,062,167	-				-0.2
4,062,167	-				+0.3
4,062,167	-				+1.1
4,062,173	+				+1.2
4,062,173	+				+0.4
4,062,173	+				+0.8
4,062,173	+				+0.3
4,062,174	-				-1.2
4,062,174	-				-0.2
4,062,174	-				-2.7
4,062,184	-				+1.0
4,062,231	-				-1.3
4,062,234	+				-1.2
4,062,234	+				+0.5
4,062,234	+				-0.2
4,062,234	+				+1.4
4,062,235	-				-0.5
4,062,235	-				+1.8
4,062,235	-				+1.0
4,062,235	-				+0.8
4,062,315	+				-0.3
4,062,315	+				-0.3
4,062,316	-				+1.2
4,062,316	-				+1.6
4,062,316	-				-1.4
4,062,316	-				+3.4
4,062,371	+				-0.6
4,062,513	-		AO353_18440	0.16	+0.7