Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17640

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,886,714	+		AO353_17635	0.22	-0.7
3,886,714	+		AO353_17635	0.22	+1.9
3,886,715	-		AO353_17635	0.22	+0.9
3,886,747	+		AO353_17635	0.25	-1.6
3,886,763	+		AO353_17635	0.27	-0.1
3,886,763	+		AO353_17635	0.27	+0.4
3,886,763	+		AO353_17635	0.27	+1.3
3,886,764	-		AO353_17635	0.27	+0.3
3,886,764	-		AO353_17635	0.27	-1.3
3,886,805	+		AO353_17635	0.31	+0.3
3,886,805	+		AO353_17635	0.31	-2.2
3,886,806	-		AO353_17635	0.31	-0.4
3,886,858	-		AO353_17635	0.37	+0.7
3,886,858	-		AO353_17635	0.37	-0.1
3,886,858	-		AO353_17635	0.37	+0.8
3,887,149	+		AO353_17635	0.67	+1.5
3,887,149	+		AO353_17635	0.67	-0.0
3,887,149	+		AO353_17635	0.67	-2.0
3,887,150	-		AO353_17635	0.67	+0.3
3,887,189	+		AO353_17635	0.71	-1.1
3,887,190	-		AO353_17635	0.71	-1.0
3,887,190	-		AO353_17635	0.71	-0.6
3,887,195	+		AO353_17635	0.72	-0.2
3,887,196	-		AO353_17635	0.72	-0.4
3,887,244	+		AO353_17635	0.77	+0.1
3,887,244	+		AO353_17635	0.77	+1.9
3,887,244	+		AO353_17635	0.77	-0.2
3,887,244	+		AO353_17635	0.77	-0.8
3,887,244	+		AO353_17635	0.77	-1.1
3,887,244	+		AO353_17635	0.77	-1.4
3,887,244	+		AO353_17635	0.77	-0.9
3,887,244	+		AO353_17635	0.77	-0.9
3,887,244	+		AO353_17635	0.77	+0.2
3,887,244	+		AO353_17635	0.77	-1.1
3,887,244	+		AO353_17635	0.77	-0.7
3,887,244	+		AO353_17635	0.77	-1.1
3,887,245	-		AO353_17635	0.77	-2.2
3,887,245	-		AO353_17635	0.77	+0.9
3,887,245	-		AO353_17635	0.77	-1.3
3,887,245	-		AO353_17635	0.77	-1.3
3,887,245	-		AO353_17635	0.77	+0.2
3,887,245	-		AO353_17635	0.77	-0.9
3,887,245	-		AO353_17635	0.77	-0.7
3,887,245	-		AO353_17635	0.77	+0.2
3,887,316	-		AO353_17635	0.84	-0.1
3,887,316	-		AO353_17635	0.84	+1.6
3,887,323	+		AO353_17635	0.85	-0.4
3,887,386	+				-1.8
3,887,386	+				-0.3
3,887,387	-				+1.3
3,887,444	+				-0.2
3,887,444	+				+1.2
3,887,445	-				-1.7
3,887,592	+				+0.3
3,887,592	+				+1.0
3,887,594	+				-0.5
3,887,594	+				-1.3
3,887,594	+				-1.1
3,887,653	+				+1.3
3,887,653	+				+1.6
3,887,653	+				+1.1
3,887,653	+				+0.3
3,887,653	+				-1.4
3,887,653	+				+0.4
3,887,653	+				-1.0
3,887,665	+				+0.4
3,888,038	+				+0.9
3,888,879	+		AO353_17640	0.82	-1.1
3,888,879	+		AO353_17640	0.82	-2.8
3,888,879	+		AO353_17640	0.82	-2.0
3,888,879	+		AO353_17640	0.82	-0.7
3,888,880	-		AO353_17640	0.82	+0.6
3,888,880	-		AO353_17640	0.82	+0.7
3,889,000	+				+1.2
3,889,000	+				-0.6
3,889,081	-				-0.7
3,889,081	-				+0.3
3,889,120	+				+0.2
3,889,120	+				-1.3
3,889,120	+				-0.1
3,889,121	-				-0.1
3,889,121	-				-0.1
3,889,121	-				+1.6
3,889,121	-				-2.0
3,889,140	-				+1.8
3,889,190	-				-1.0
3,889,360	+		AO353_17645	0.11	-1.3
3,889,360	+		AO353_17645	0.11	+1.3
3,889,360	+		AO353_17645	0.11	-2.3
3,889,361	-		AO353_17645	0.11	-1.1
3,889,426	+		AO353_17645	0.15	-2.7
3,889,426	+		AO353_17645	0.15	-1.7
3,889,426	+		AO353_17645	0.15	-2.2
3,889,426	+		AO353_17645	0.15	-2.3
3,889,426	+		AO353_17645	0.15	-1.6
3,889,426	+		AO353_17645	0.15	-0.4
3,889,427	-		AO353_17645	0.15	-2.6
3,889,427	-		AO353_17645	0.15	-1.8
3,889,427	-		AO353_17645	0.15	-2.9
3,889,427	-		AO353_17645	0.15	-2.3
3,889,427	-		AO353_17645	0.15	-1.6
3,889,427	-		AO353_17645	0.15	-0.9
3,889,636	+		AO353_17645	0.30	-1.3
3,889,636	+		AO353_17645	0.30	-0.4
3,889,636	+		AO353_17645	0.30	-0.4
3,889,637	-		AO353_17645	0.30	-0.1
3,889,637	-		AO353_17645	0.30	-2.8
3,889,637	-		AO353_17645	0.30	-3.1
3,889,637	-		AO353_17645	0.30	-1.1
3,889,637	-		AO353_17645	0.30	-1.4
3,889,637	-		AO353_17645	0.30	-1.5
3,889,637	-		AO353_17645	0.30	-1.7
3,889,637	-		AO353_17645	0.30	-2.2
3,889,732	+		AO353_17645	0.37	-0.7
3,889,740	+		AO353_17645	0.37	-1.8
3,889,740	+		AO353_17645	0.37	-2.4
3,889,740	+		AO353_17645	0.37	-2.5
3,889,741	-		AO353_17645	0.37	-1.7
3,889,741	-		AO353_17645	0.37	+0.3
3,889,741	-		AO353_17645	0.37	-3.1
3,889,741	-		AO353_17645	0.37	-2.4
3,889,741	-		AO353_17645	0.37	-2.3
3,889,741	-		AO353_17645	0.37	-2.0
3,889,810	+		AO353_17645	0.42	-1.9
3,889,810	+		AO353_17645	0.42	+1.2
3,889,811	-		AO353_17645	0.42	-1.4
3,889,816	-		AO353_17645	0.43	-1.7
3,889,816	-		AO353_17645	0.43	-2.1
3,889,816	-		AO353_17645	0.43	+1.6
3,889,843	+		AO353_17645	0.44	-1.7
3,889,843	+		AO353_17645	0.44	-1.7
3,889,843	+		AO353_17645	0.44	-1.7
3,889,843	+		AO353_17645	0.44	-1.8
3,889,844	-		AO353_17645	0.44	-0.5
3,889,844	-		AO353_17645	0.44	-2.0
3,889,844	-		AO353_17645	0.44	-0.7
3,889,844	-		AO353_17645	0.44	-2.3
3,889,844	-		AO353_17645	0.44	-0.9
3,890,046	-		AO353_17645	0.59	-0.0