Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17415

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,845,966	+		AO353_17405	0.30	-0.4
3,845,966	+		AO353_17405	0.30	-0.6
3,845,966	+		AO353_17405	0.30	-1.4
3,845,966	+		AO353_17405	0.30	-0.9
3,845,966	+		AO353_17405	0.30	+0.7
3,845,967	-		AO353_17405	0.30	-1.4
3,845,967	-		AO353_17405	0.30	-1.6
3,845,967	-		AO353_17405	0.30	-0.5
3,845,967	-		AO353_17405	0.30	-0.4
3,846,071	+		AO353_17405	0.48	-0.1
3,846,071	+		AO353_17405	0.48	-1.3
3,846,071	+		AO353_17405	0.48	+2.5
3,846,071	+		AO353_17405	0.48	-0.3
3,846,072	-		AO353_17405	0.48	+0.4
3,846,072	-		AO353_17405	0.48	-0.4
3,846,072	-		AO353_17405	0.48	+1.1
3,846,072	-		AO353_17405	0.48	+0.2
3,846,096	+		AO353_17405	0.52	-0.4
3,846,096	+		AO353_17405	0.52	+0.4
3,846,371	+				-1.1
3,846,371	+				+0.7
3,846,372	-				+0.1
3,846,372	-				+0.1
3,846,372	-				-0.4
3,846,400	+				-0.2
3,846,401	-				-1.8
3,846,401	-				+0.4
3,846,401	-				-2.2
3,846,425	-		AO353_17410	0.12	+0.4
3,846,559	+		AO353_17410	0.56	+0.1
3,846,559	+		AO353_17410	0.56	+0.2
3,846,665	+				-2.1
3,846,691	+				-0.4
3,846,691	+				-1.3
3,846,691	+				+0.7
3,846,691	+				+0.1
3,846,691	+				+0.6
3,846,691	+				+0.0
3,846,691	+				+0.8
3,846,692	-				+1.1
3,846,692	-				+1.4
3,846,692	-				-2.1
3,846,692	-				-0.6
3,846,692	-				+1.2
3,846,692	-				+0.5
3,846,692	-				+0.4
3,846,703	+				-1.4
3,846,703	+				-1.1
3,846,703	+				+0.4
3,846,703	+				-0.0
3,846,703	+				-0.8
3,846,704	-				+0.4
3,846,704	-				+1.3
3,846,704	-				-0.8
3,846,704	-				-0.6
3,846,704	-				-0.6
3,846,774	-				-0.2
3,846,835	-				-0.0
3,846,835	-				-0.9
3,846,835	-				-0.9
3,846,888	+				+0.9
3,846,888	+				+1.5
3,846,888	+				+0.4
3,846,889	-				+1.1
3,846,889	-				+0.4
3,846,959	+		AO353_17415	0.24	+1.4
3,846,960	-		AO353_17415	0.24	+0.9
3,846,972	+		AO353_17415	0.28	-0.4
3,846,973	-				+0.9
3,846,973	-		AO353_17415	0.28	+0.2
3,846,973	-		AO353_17415	0.28	-2.4
3,846,973	-		AO353_17415	0.28	-0.8
3,846,973	-		AO353_17415	0.28	-0.9
3,846,973	-		AO353_17415	0.28	-0.1
3,846,973	-		AO353_17415	0.28	-0.3
3,846,973	-		AO353_17415	0.28	-0.9
3,847,041	+		AO353_17415	0.48	+0.4
3,847,042	-		AO353_17415	0.48	-0.9
3,847,042	-		AO353_17415	0.48	-1.2
3,847,074	+		AO353_17415	0.57	+0.8
3,847,074	+		AO353_17415	0.57	+0.5
3,847,074	+		AO353_17415	0.57	-1.4
3,847,074	+		AO353_17415	0.57	+0.9
3,847,074	+		AO353_17415	0.57	-0.8
3,847,074	+		AO353_17415	0.57	+0.1
3,847,074	+		AO353_17415	0.57	-0.4
3,847,074	+		AO353_17415	0.57	-0.6
3,847,074	+		AO353_17415	0.57	+0.5
3,847,075	-		AO353_17415	0.58	-0.1
3,847,075	-		AO353_17415	0.58	-1.4
3,847,075	-		AO353_17415	0.58	-0.6
3,847,075	-		AO353_17415	0.58	-2.4
3,847,075	-		AO353_17415	0.58	-0.1
3,847,075	-		AO353_17415	0.58	-0.6
3,847,075	-		AO353_17415	0.58	-0.6
3,847,075	-		AO353_17415	0.58	-1.1
3,847,075	-		AO353_17415	0.58	+0.1
3,847,075	-		AO353_17415	0.58	-0.2
3,847,075	-		AO353_17415	0.58	-0.4
3,847,075	-		AO353_17415	0.58	+1.5
3,847,125	+		AO353_17415	0.72	+0.7
3,847,125	+		AO353_17415	0.72	-0.3
3,847,125	+		AO353_17415	0.72	-1.3
3,847,125	+		AO353_17415	0.72	+0.7
3,847,126	-		AO353_17415	0.72	-0.1
3,847,126	-		AO353_17415	0.72	+0.6
3,847,126	-		AO353_17415	0.72	+1.3
3,847,126	-		AO353_17415	0.72	-2.5
3,847,126	-		AO353_17415	0.72	-0.9
3,847,218	+				-1.8
3,847,219	-				+0.8
3,847,219	-				-0.8
3,847,219	-				+0.5
3,847,219	-				+1.2
3,847,714	+				+2.9
3,847,715	-				+0.5
3,847,715	-				-0.3
3,847,869	+		AO353_17420	0.25	+0.9
3,847,869	+		AO353_17420	0.25	+1.5
3,847,870	-		AO353_17420	0.25	+0.1
3,847,870	-		AO353_17420	0.25	-1.2
3,847,880	-		AO353_17420	0.26	+0.9
3,847,894	+		AO353_17420	0.27	-2.0
3,847,894	+		AO353_17420	0.27	+0.3
3,847,895	-		AO353_17420	0.28	+0.7
3,847,895	-		AO353_17420	0.28	-0.6
3,848,097	-		AO353_17420	0.47	-0.6
3,848,105	+		AO353_17420	0.48	-0.5
3,848,112	-		AO353_17420	0.49	+0.6
3,848,145	+		AO353_17420	0.52	+0.3
3,848,145	+		AO353_17420	0.52	+2.7
3,848,146	-		AO353_17420	0.52	-2.1
3,848,146	-		AO353_17420	0.52	-0.3
3,848,146	-		AO353_17420	0.52	+0.2
3,848,185	+		AO353_17420	0.56	+0.2
3,848,185	+		AO353_17420	0.56	+0.1
3,848,185	+		AO353_17420	0.56	-0.5
3,848,185	+		AO353_17420	0.56	+0.1
3,848,186	-		AO353_17420	0.56	-2.4
3,848,186	-		AO353_17420	0.56	+2.4
3,848,200	+		AO353_17420	0.57	+0.4
3,848,200	+		AO353_17420	0.57	+0.4
3,848,201	-		AO353_17420	0.58	+0.8
3,848,201	-		AO353_17420	0.58	+0.2