Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17375

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,837,373	+		AO353_17370	0.28	-0.1
3,837,652	+		AO353_17370	0.53	+0.4
3,837,653	-		AO353_17370	0.53	+0.0
3,837,653	-		AO353_17370	0.53	-0.4
3,837,742	+		AO353_17370	0.60	+1.2
3,837,742	+		AO353_17370	0.60	-0.1
3,837,742	+		AO353_17370	0.60	-0.4
3,837,742	+		AO353_17370	0.60	-2.1
3,837,742	+		AO353_17370	0.60	+0.9
3,837,742	+		AO353_17370	0.60	-0.6
3,837,743	-		AO353_17370	0.60	+0.6
3,837,743	-		AO353_17370	0.60	-1.1
3,837,743	-		AO353_17370	0.60	-0.6
3,837,868	+		AO353_17370	0.71	-0.6
3,837,868	+		AO353_17370	0.71	-0.3
3,837,869	-		AO353_17370	0.71	-0.6
3,837,869	-		AO353_17370	0.71	-0.1
3,837,871	+		AO353_17370	0.72	+0.2
3,837,910	+		AO353_17370	0.75	+0.4
3,838,089	+				-0.6
3,838,089	+				-0.1
3,838,090	-				+0.1
3,838,090	-				+1.1
3,838,249	+				+0.0
3,838,258	+				+1.2
3,838,258	+				+0.7
3,838,259	-				+0.3
3,838,305	-				-0.1
3,838,305	-				-1.6
3,838,305	-				+1.2
3,838,373	+				-0.3
3,838,454	+				-2.3
3,838,454	+				+0.3
3,838,454	+				+0.2
3,838,454	+				-0.1
3,838,454	+				+0.9
3,838,454	+				-2.4
3,838,454	+				+1.0
3,838,455	-				+0.4
3,838,472	+				-0.3
3,838,472	+				-0.5
3,838,473	-				+1.7
3,838,473	-				+0.6
3,838,601	+				-1.1
3,838,602	-		AO353_17375	0.10	+1.1
3,838,602	-		AO353_17375	0.10	+0.3
3,838,602	-		AO353_17375	0.10	+0.1
3,838,602	-		AO353_17375	0.10	+1.7
3,838,602	-		AO353_17375	0.10	+0.3
3,838,602	-		AO353_17375	0.10	+2.6
3,838,602	-		AO353_17375	0.10	+0.3
3,838,602	-		AO353_17375	0.10	+0.5
3,838,644	+		AO353_17375	0.12	-0.4
3,838,727	+		AO353_17375	0.15	+1.2
3,838,727	+		AO353_17375	0.15	+0.8
3,838,728	-		AO353_17375	0.16	+0.7
3,838,728	-		AO353_17375	0.16	+0.9
3,838,728	-		AO353_17375	0.16	+0.0
3,838,728	-		AO353_17375	0.16	+1.1
3,838,728	-		AO353_17375	0.16	-0.6
3,838,728	-		AO353_17375	0.16	+0.2
3,838,778	+		AO353_17375	0.18	+0.1
3,838,778	+		AO353_17375	0.18	-0.9
3,838,779	-		AO353_17375	0.18	+1.5
3,838,790	+		AO353_17375	0.18	+1.5
3,838,790	+		AO353_17375	0.18	+1.2
3,838,790	+		AO353_17375	0.18	+0.1
3,838,790	+		AO353_17375	0.18	+0.4
3,838,790	+		AO353_17375	0.18	-0.9
3,838,791	-		AO353_17375	0.18	-1.1
3,838,791	-		AO353_17375	0.18	-1.1
3,838,791	-		AO353_17375	0.18	+0.0
3,838,791	-		AO353_17375	0.18	-1.6
3,838,791	-		AO353_17375	0.18	+2.2
3,838,841	+		AO353_17375	0.20	+0.9
3,838,841	+		AO353_17375	0.20	+0.4
3,838,841	+		AO353_17375	0.20	+0.6
3,838,841	+		AO353_17375	0.20	+1.3
3,838,841	+		AO353_17375	0.20	+1.1
3,838,841	+		AO353_17375	0.20	+0.1
3,838,841	+		AO353_17375	0.20	+0.7
3,838,841	+		AO353_17375	0.20	-0.9
3,838,841	+		AO353_17375	0.20	+1.1
3,838,841	+		AO353_17375	0.20	-0.1
3,838,841	+		AO353_17375	0.20	+0.3
3,838,841	+		AO353_17375	0.20	-1.4
3,838,842	-		AO353_17375	0.21	-0.2
3,838,842	-		AO353_17375	0.21	+0.9
3,838,842	-		AO353_17375	0.21	+0.4
3,838,842	-		AO353_17375	0.21	-1.0
3,838,842	-		AO353_17375	0.21	+0.1
3,838,842	-		AO353_17375	0.21	+0.1
3,838,842	-		AO353_17375	0.21	+0.1
3,838,842	-		AO353_17375	0.21	-0.1
3,838,842	-		AO353_17375	0.21	+1.9
3,838,842	-		AO353_17375	0.21	+0.6
3,838,844	+		AO353_17375	0.21	+0.7
3,838,844	+		AO353_17375	0.21	+0.4
3,838,844	+		AO353_17375	0.21	-0.5
3,838,844	+		AO353_17375	0.21	-1.6
3,838,844	+		AO353_17375	0.21	+1.1
3,838,844	+		AO353_17375	0.21	+2.2
3,838,845	-		AO353_17375	0.21	-1.7
3,838,845	-		AO353_17375	0.21	-0.1
3,838,904	+		AO353_17375	0.23	+0.7
3,838,904	+		AO353_17375	0.23	+0.4
3,838,905	-		AO353_17375	0.23	-1.1
3,838,953	+		AO353_17375	0.25	+0.6
3,839,261	+		AO353_17375	0.39	-0.8
3,839,261	+		AO353_17375	0.39	-0.7
3,839,262	-		AO353_17375	0.39	-0.9
3,839,306	+		AO353_17375	0.41	+0.9
3,839,306	+		AO353_17375	0.41	+0.2
3,839,306	+		AO353_17375	0.41	-0.4
3,839,306	+		AO353_17375	0.41	+0.9
3,839,306	+		AO353_17375	0.41	+1.9
3,839,306	+		AO353_17375	0.41	+0.9
3,839,306	+		AO353_17375	0.41	+1.8
3,839,306	+		AO353_17375	0.41	+0.4
3,839,306	+		AO353_17375	0.41	-0.4
3,839,307	-		AO353_17375	0.41	+0.3
3,839,307	-		AO353_17375	0.41	+1.6
3,839,307	-		AO353_17375	0.41	-0.4
3,839,307	-		AO353_17375	0.41	+1.1
3,839,307	-		AO353_17375	0.41	+1.1
3,839,307	-		AO353_17375	0.41	+0.2
3,839,307	-		AO353_17375	0.41	-0.2
3,839,307	-		AO353_17375	0.41	+0.6
3,839,307	-		AO353_17375	0.41	-0.8
3,839,307	-		AO353_17375	0.41	+0.3
3,839,307	-		AO353_17375	0.41	+0.9
3,839,307	-		AO353_17375	0.41	+1.5
3,839,307	-		AO353_17375	0.41	+1.3
3,839,377	-		AO353_17375	0.44	+1.1
3,839,549	+		AO353_17375	0.51	-0.6
3,839,549	+		AO353_17375	0.51	+0.2
3,839,550	-		AO353_17375	0.51	+1.0
3,839,592	-		AO353_17375	0.53	-0.4
3,839,618	+		AO353_17375	0.54	+1.1
3,839,618	+		AO353_17375	0.54	+1.4
3,839,619	-		AO353_17375	0.54	-0.1
3,839,619	-		AO353_17375	0.54	-0.2
3,839,619	-		AO353_17375	0.54	-1.0
3,839,619	-		AO353_17375	0.54	-0.6
3,839,619	-		AO353_17375	0.54	+0.7
3,839,619	-		AO353_17375	0.54	-0.4
3,839,972	+		AO353_17375	0.70	-1.2
3,839,972	+		AO353_17375	0.70	+0.6
3,839,972	+		AO353_17375	0.70	+0.7
3,839,972	+		AO353_17375	0.70	+1.1
3,839,973	-		AO353_17375	0.70	-0.1
3,839,973	-		AO353_17375	0.70	+0.9
3,839,981	+		AO353_17375	0.70	+0.7
3,839,981	+		AO353_17375	0.70	+0.1
3,839,981	+		AO353_17375	0.70	+0.5
3,839,982	+		AO353_17375	0.70	+0.6
3,839,982	-		AO353_17375	0.70	+0.9
3,839,982	-		AO353_17375	0.70	-0.2
3,839,982	-		AO353_17375	0.70	-0.2
3,839,982	-		AO353_17375	0.70	-0.2
3,839,982	-		AO353_17375	0.70	+2.2
3,839,982	-		AO353_17375	0.70	+0.4
3,840,014	+		AO353_17375	0.72	+0.0
3,840,014	+		AO353_17375	0.72	+0.9
3,840,015	-		AO353_17375	0.72	+1.2
3,840,015	-		AO353_17375	0.72	-0.4
3,840,015	-		AO353_17375	0.72	+1.2
3,840,042	-		AO353_17375	0.73	-1.4
3,840,104	+		AO353_17375	0.76	-0.2
3,840,105	-		AO353_17375	0.76	+0.7
3,840,105	-		AO353_17375	0.76	-0.2
3,840,105	-		AO353_17375	0.76	+1.3
3,840,143	+		AO353_17375	0.77	+0.6
3,840,143	+		AO353_17375	0.77	+1.9
3,840,143	+		AO353_17375	0.77	-1.6
3,840,143	+		AO353_17375	0.77	-0.1
3,840,143	+		AO353_17375	0.77	+0.5
3,840,143	+		AO353_17375	0.77	-0.4
3,840,143	+		AO353_17375	0.77	+0.7
3,840,143	+		AO353_17375	0.77	-0.2
3,840,143	+		AO353_17375	0.77	-0.6
3,840,143	+		AO353_17375	0.77	+1.5
3,840,143	+		AO353_17375	0.77	+0.9
3,840,143	+		AO353_17375	0.77	+1.7
3,840,143	+		AO353_17375	0.77	-0.6
3,840,143	+		AO353_17375	0.77	-0.2
3,840,144	-		AO353_17375	0.77	+0.4
3,840,144	-		AO353_17375	0.77	+0.5
3,840,144	-		AO353_17375	0.77	+0.5
3,840,144	-		AO353_17375	0.77	+0.1
3,840,144	-		AO353_17375	0.77	-0.6
3,840,144	-		AO353_17375	0.77	+0.2
3,840,144	-		AO353_17375	0.77	-0.4
3,840,351	-		AO353_17375	0.86	+0.6
3,840,667	+				-0.4
3,840,667	+				-0.1
3,840,667	+				+0.8
3,840,667	+				+0.1
3,840,668	-				+0.1
3,840,668	-				-1.1
3,840,668	-				+0.0
3,840,668	-				+0.5
3,840,668	-				+2.2
3,840,668	-				-2.0
3,840,748	+				+0.3
3,840,749	-				+0.0
3,840,749	-				+0.5
3,840,765	+				-0.4
3,840,765	+				+1.7
3,840,765	+				+0.9
3,840,765	+				-0.5
3,840,792	+				-2.4
3,840,832	+				-0.6
3,840,832	+				-0.6
3,840,832	+				-1.0
3,840,832	+				+0.5
3,840,833	-				-1.1
3,840,869	-				+0.5
3,840,869	-				-0.1
3,840,869	-				-1.5
3,840,869	-				-0.9
3,840,869	-				+0.4
3,840,869	-				-0.6
3,840,911	+				-0.7
3,840,911	+				-1.2
3,840,912	-				+1.0
3,840,912	-				-0.6
3,840,941	+				-0.7
3,840,941	+				+1.8
3,840,941	+				-0.9
3,840,941	+				+1.1
3,840,941	+				-1.6
3,840,941	+				+1.9
3,840,941	+				+4.3
3,840,941	+				+0.0
3,840,942	-				-0.1
3,840,942	-				-0.1
3,840,942	-				+0.1
3,840,942	-				+0.4
3,840,942	-				+0.4
3,840,942	-				-0.1
3,840,947	+				-0.9
3,840,947	+				-0.6
3,840,947	+				+1.7
3,840,948	-				-2.6
3,840,948	-				+0.5
3,840,948	-				+1.1
3,840,948	-				-0.9
3,840,948	-				+1.5
3,841,048	+		AO353_17380	0.24	+0.1
3,841,384	+		AO353_17380	0.79	-0.4
3,841,384	+		AO353_17380	0.79	-1.6
3,841,384	+		AO353_17380	0.79	+0.7
3,841,384	+		AO353_17380	0.79	+0.6
3,841,384	+		AO353_17380	0.79	-0.9
3,841,385	-		AO353_17380	0.79	+0.5
3,841,385	-		AO353_17380	0.79	+0.8
3,841,385	-		AO353_17380	0.79	+1.4
3,841,385	-		AO353_17380	0.79	+0.4
3,841,435	+		AO353_17380	0.87	-0.1
3,841,436	-		AO353_17380	0.87	+0.3
3,841,436	-		AO353_17380	0.87	-0.9