Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17365

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,835,524	+		AO353_17355	0.52	+0.4
3,835,524	+		AO353_17355	0.52	+1.1
3,835,524	+		AO353_17355	0.52	-1.1
3,835,524	+		AO353_17355	0.52	+0.4
3,835,524	+		AO353_17355	0.52	-0.6
3,835,524	+		AO353_17355	0.52	+0.9
3,835,524	+		AO353_17355	0.52	+0.3
3,835,524	+		AO353_17355	0.52	-1.5
3,835,525	-		AO353_17355	0.53	-0.6
3,835,525	-		AO353_17355	0.53	+0.3
3,835,525	-		AO353_17355	0.53	+0.9
3,835,525	-		AO353_17355	0.53	+1.1
3,835,525	-		AO353_17355	0.53	-0.1
3,835,525	-		AO353_17355	0.53	+0.1
3,835,525	-		AO353_17355	0.53	-0.1
3,835,525	-		AO353_17355	0.53	+0.1
3,835,525	-		AO353_17355	0.53	+1.4
3,835,525	-		AO353_17355	0.53	+2.3
3,835,525	-		AO353_17355	0.53	-0.4
3,835,525	-		AO353_17355	0.53	+1.9
3,835,525	-		AO353_17355	0.53	-0.1
3,835,525	-		AO353_17355	0.53	+2.9
3,835,575	-		AO353_17355	0.57	-1.4
3,835,609	-		AO353_17355	0.60	-1.2
3,835,661	+		AO353_17355	0.65	+0.1
3,835,661	+		AO353_17355	0.65	-1.4
3,835,661	+		AO353_17355	0.65	+0.4
3,835,662	-		AO353_17355	0.65	-0.4
3,835,662	-		AO353_17355	0.65	+0.3
3,835,662	-		AO353_17355	0.65	+1.6
3,835,662	-		AO353_17355	0.65	+1.6
3,835,662	-		AO353_17355	0.65	+0.9
3,835,662	-		AO353_17355	0.65	-0.4
3,835,667	+		AO353_17355	0.65	+0.2
3,835,667	+		AO353_17355	0.65	+0.1
3,835,667	+		AO353_17355	0.65	+1.2
3,835,667	+		AO353_17355	0.65	+1.6
3,835,667	+		AO353_17355	0.65	+2.6
3,835,667	+		AO353_17355	0.65	-1.5
3,835,667	+		AO353_17355	0.65	-0.2
3,835,667	+		AO353_17355	0.65	+0.6
3,835,667	+		AO353_17355	0.65	-0.9
3,835,667	+		AO353_17355	0.65	+0.0
3,835,667	+		AO353_17355	0.65	-1.4
3,835,667	+		AO353_17355	0.65	+0.1
3,835,667	+		AO353_17355	0.65	-0.2
3,835,667	+		AO353_17355	0.65	+0.6
3,835,667	+		AO353_17355	0.65	-1.1
3,835,667	+		AO353_17355	0.65	+0.0
3,835,667	+		AO353_17355	0.65	+0.5
3,835,667	+		AO353_17355	0.65	-1.5
3,835,668	-		AO353_17355	0.66	+0.4
3,835,668	-		AO353_17355	0.66	-0.8
3,835,668	-		AO353_17355	0.66	-2.1
3,835,668	-		AO353_17355	0.66	-1.1
3,835,668	-		AO353_17355	0.66	+1.7
3,835,668	-		AO353_17355	0.66	-0.1
3,835,668	-		AO353_17355	0.66	+0.8
3,835,668	-		AO353_17355	0.66	-0.4
3,835,668	-		AO353_17355	0.66	+0.2
3,835,668	-		AO353_17355	0.66	-1.4
3,835,668	-		AO353_17355	0.66	-0.1
3,835,668	-		AO353_17355	0.66	+0.1
3,835,668	-		AO353_17355	0.66	-0.0
3,835,668	-		AO353_17355	0.66	+0.9
3,835,668	-		AO353_17355	0.66	-1.4
3,835,668	-		AO353_17355	0.66	-2.0
3,835,668	-		AO353_17355	0.66	+0.5
3,835,668	-		AO353_17355	0.66	-0.8
3,835,668	-		AO353_17355	0.66	+0.4
3,835,668	-		AO353_17355	0.66	-0.6
3,835,669	+		AO353_17355	0.66	-0.6
3,835,669	+		AO353_17355	0.66	-0.9
3,835,669	+		AO353_17355	0.66	-0.6
3,835,669	+		AO353_17355	0.66	-0.4
3,835,669	+		AO353_17355	0.66	-1.2
3,835,669	+		AO353_17355	0.66	-0.9
3,835,669	+		AO353_17355	0.66	+1.4
3,835,669	+		AO353_17355	0.66	+0.4
3,835,670	-		AO353_17355	0.66	-0.9
3,835,670	-		AO353_17355	0.66	-1.4
3,835,670	-		AO353_17355	0.66	-0.5
3,835,922	+		AO353_17355	0.89	+0.5
3,835,922	+		AO353_17355	0.89	+0.3
3,835,922	+		AO353_17355	0.89	+1.0
3,835,922	+		AO353_17355	0.89	-0.8
3,835,923	-		AO353_17355	0.89	+0.2
3,835,923	-		AO353_17355	0.89	-0.4
3,835,923	-		AO353_17355	0.89	-0.2
3,835,923	-		AO353_17355	0.89	+1.4
3,835,923	-		AO353_17355	0.89	+0.7
3,835,923	-		AO353_17355	0.89	-0.2
3,835,923	-		AO353_17355	0.89	+1.2
3,835,923	-		AO353_17355	0.89	-2.2
3,835,958	+				-0.3
3,835,959	-				+0.5
3,836,055	+				-1.3
3,836,055	+				-1.5
3,836,055	+				+1.8
3,836,056	-				+0.9
3,836,056	-				-0.5
3,836,056	-				-1.1
3,836,056	-				+0.1
3,836,056	-				+0.6
3,836,056	-				+1.1
3,836,168	-		AO353_17360	0.39	+0.1
3,836,182	+		AO353_17360	0.43	-0.1
3,836,182	+		AO353_17360	0.43	+0.4
3,836,183	-		AO353_17360	0.43	+0.8
3,836,183	-		AO353_17360	0.43	-1.6
3,836,183	-		AO353_17360	0.43	+0.8
3,836,183	-		AO353_17360	0.43	+1.7
3,836,183	-		AO353_17360	0.43	+2.9
3,836,197	+		AO353_17360	0.48	-0.8
3,836,222	-		AO353_17360	0.55	-1.5
3,836,233	+		AO353_17360	0.59	-2.1
3,836,233	+		AO353_17360	0.59	-0.1
3,836,233	+		AO353_17360	0.59	-0.4
3,836,233	+		AO353_17360	0.59	+3.8
3,836,233	+		AO353_17360	0.59	-0.7
3,836,233	+		AO353_17360	0.59	+0.3
3,836,234	-		AO353_17360	0.59	-2.4
3,836,234	-		AO353_17360	0.59	+0.5
3,836,234	-		AO353_17360	0.59	+1.2
3,836,245	+		AO353_17360	0.62	+0.1
3,836,245	+		AO353_17360	0.62	-0.2
3,836,246	-		AO353_17360	0.63	+0.0
3,836,246	-		AO353_17360	0.63	+0.5
3,836,246	-		AO353_17360	0.63	-1.5
3,836,246	-		AO353_17360	0.63	-1.2
3,836,246	-		AO353_17360	0.63	-0.2
3,836,246	-		AO353_17360	0.63	+1.3
3,836,319	+		AO353_17360	0.85	-0.4
3,836,366	-				+1.6
3,836,414	+				+0.6
3,836,432	+				-1.2
3,836,432	+				-0.3
3,836,432	+				-1.1
3,836,433	-				+0.2
3,836,433	-				+0.9
3,836,450	+				-0.1
3,836,450	+				-0.9
3,836,450	+				-1.1
3,836,451	-				+0.4
3,836,451	-				-0.6
3,836,505	-				-1.2
3,836,505	-				-0.1
3,836,505	-				-0.2
3,836,529	+		AO353_17365	0.13	-0.7
3,836,530	-		AO353_17365	0.13	-1.1
3,836,561	+		AO353_17365	0.19	-1.2
3,836,561	+		AO353_17365	0.19	-0.4
3,836,562	-		AO353_17365	0.19	+0.1
3,836,562	-		AO353_17365	0.19	+0.8
3,836,562	-		AO353_17365	0.19	-1.2
3,836,850	+		AO353_17365	0.68	-0.4
3,836,850	+				+2.9
3,836,851	-		AO353_17365	0.68	-0.4
3,836,993	+				-1.1
3,836,993	+				+0.6
3,836,993	+				+1.0
3,836,993	+				+1.6
3,836,993	+				+0.6
3,836,993	+				-0.2
3,836,993	+				-0.2
3,836,993	+				-1.8
3,836,993	+				+0.3
3,836,993	+				-0.0
3,836,994	-				-0.8
3,836,994	-				-0.8
3,836,994	-				+0.9
3,836,994	-				-0.1
3,836,994	-				+0.9
3,836,994	-				-0.9
3,836,994	-				-0.9
3,836,994	-				+1.6
3,836,994	-				+0.6
3,836,994	-				-1.9
3,836,994	-				-1.1
3,836,994	-				-1.1
3,837,169	+		AO353_17370	0.11	+0.1
3,837,169	+		AO353_17370	0.11	+0.7
3,837,169	+		AO353_17370	0.11	-0.1
3,837,170	-		AO353_17370	0.11	-0.4
3,837,170	-		AO353_17370	0.11	+0.9
3,837,170	-		AO353_17370	0.11	+0.4
3,837,265	+		AO353_17370	0.19	+1.9
3,837,265	+		AO353_17370	0.19	+1.9
3,837,266	-		AO353_17370	0.19	+2.4
3,837,266	-		AO353_17370	0.19	-0.6
3,837,266	-		AO353_17370	0.19	+1.5
3,837,334	+		AO353_17370	0.25	+1.9
3,837,334	+		AO353_17370	0.25	-2.6
3,837,334	+		AO353_17370	0.25	+0.8
3,837,335	-		AO353_17370	0.25	+1.7
3,837,335	-		AO353_17370	0.25	-1.6
3,837,335	-		AO353_17370	0.25	-3.1
3,837,335	-		AO353_17370	0.25	+0.1
3,837,373	+		AO353_17370	0.28	-0.1
3,837,652	+		AO353_17370	0.53	+0.4
3,837,653	-		AO353_17370	0.53	+0.0
3,837,653	-		AO353_17370	0.53	-0.4
3,837,742	+		AO353_17370	0.60	+1.2
3,837,742	+		AO353_17370	0.60	-0.1
3,837,742	+		AO353_17370	0.60	-0.4
3,837,742	+		AO353_17370	0.60	-2.1
3,837,742	+		AO353_17370	0.60	+0.9
3,837,742	+		AO353_17370	0.60	-0.6
3,837,743	-		AO353_17370	0.60	+0.6
3,837,743	-		AO353_17370	0.60	-1.1
3,837,743	-		AO353_17370	0.60	-0.6
3,837,868	+		AO353_17370	0.71	-0.6
3,837,868	+		AO353_17370	0.71	-0.3
3,837,869	-		AO353_17370	0.71	-0.6
3,837,869	-		AO353_17370	0.71	-0.1
3,837,871	+		AO353_17370	0.72	+0.2
3,837,910	+		AO353_17370	0.75	+0.4