Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17190

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,800,259	+		AO353_17185	0.23	-0.9
3,800,259	+		AO353_17185	0.23	-1.9
3,800,260	-		AO353_17185	0.23	+1.5
3,800,260	-		AO353_17185	0.23	+0.2
3,800,290	+		AO353_17185	0.27	-0.1
3,800,290	+		AO353_17185	0.27	-0.5
3,800,290	+		AO353_17185	0.27	-0.9
3,800,291	-		AO353_17185	0.27	+0.2
3,800,291	-		AO353_17185	0.27	+2.5
3,800,291	-		AO353_17185	0.27	+2.2
3,800,333	+		AO353_17185	0.32	-2.2
3,800,334	-		AO353_17185	0.32	+1.7
3,800,334	-		AO353_17185	0.32	-2.1
3,800,334	-		AO353_17185	0.32	+0.6
3,800,334	-		AO353_17185	0.32	+0.7
3,800,372	+		AO353_17185	0.36	-2.1
3,800,372	+		AO353_17185	0.36	-2.0
3,800,372	+		AO353_17185	0.36	-1.1
3,800,372	+		AO353_17185	0.36	-2.3
3,800,372	+		AO353_17185	0.36	-1.0
3,800,372	+		AO353_17185	0.36	-0.8
3,800,372	+		AO353_17185	0.36	-1.8
3,800,372	+		AO353_17185	0.36	-2.5
3,800,372	+		AO353_17185	0.36	-1.4
3,800,372	+		AO353_17185	0.36	-1.0
3,800,373	-		AO353_17185	0.36	-0.3
3,800,373	-		AO353_17185	0.36	-2.1
3,800,373	-		AO353_17185	0.36	+0.8
3,800,373	-		AO353_17185	0.36	-0.9
3,800,373	-		AO353_17185	0.36	+0.1
3,800,373	-		AO353_17185	0.36	+0.9
3,800,373	-		AO353_17185	0.36	+0.4
3,800,411	+		AO353_17185	0.41	+0.1
3,800,411	+		AO353_17185	0.41	-3.5
3,800,412	-		AO353_17185	0.41	+0.9
3,800,412	-		AO353_17185	0.41	-0.2
3,800,483	+		AO353_17185	0.49	-0.9
3,800,483	+		AO353_17185	0.49	-1.1
3,800,483	+		AO353_17185	0.49	-0.4
3,800,483	+		AO353_17185	0.49	-1.9
3,800,483	+		AO353_17185	0.49	-0.1
3,800,483	+		AO353_17185	0.49	-1.4
3,800,484	-		AO353_17185	0.50	+0.4
3,800,484	-		AO353_17185	0.50	-0.3
3,800,484	-		AO353_17185	0.50	-1.4
3,800,484	-		AO353_17185	0.50	+0.2
3,800,484	-		AO353_17185	0.50	+3.5
3,800,484	-		AO353_17185	0.50	+1.5
3,800,555	+		AO353_17185	0.58	-1.4
3,800,556	-		AO353_17185	0.58	+0.7
3,800,556	-		AO353_17185	0.58	-0.5
3,800,556	-		AO353_17185	0.58	+0.2
3,800,556	-		AO353_17185	0.58	-3.1
3,800,615	+		AO353_17185	0.65	+1.0
3,800,616	-		AO353_17185	0.65	+0.8
3,800,663	-		AO353_17185	0.71	-0.2
3,800,663	-		AO353_17185	0.71	+1.2
3,800,663	-		AO353_17185	0.71	-0.1
3,800,663	-		AO353_17185	0.71	-0.1
3,800,768	+		AO353_17185	0.83	-1.2
3,800,768	+		AO353_17185	0.83	+0.0
3,800,768	+		AO353_17185	0.83	-0.9
3,800,809	+		AO353_17185	0.88	-1.0
3,800,809	+		AO353_17185	0.88	-0.1
3,800,809	+		AO353_17185	0.88	+0.9
3,800,810	-		AO353_17185	0.88	-1.6
3,800,810	-		AO353_17185	0.88	+0.7
3,800,810	-		AO353_17185	0.88	+0.2
3,800,810	-		AO353_17185	0.88	-2.7
3,800,810	-		AO353_17185	0.88	-0.5
3,800,906	+				-0.1
3,800,969	+				-1.4
3,800,969	+				-0.6
3,800,969	+				-1.1
3,800,970	-				-2.0
3,801,034	-				+1.8
3,801,034	-				+0.5
3,801,034	-				+1.1
3,801,034	-				+0.6
3,801,036	+				-1.4
3,801,036	+				-1.0
3,801,036	+				-0.5
3,801,037	-				-0.5
3,801,037	-				-1.4
3,801,062	-				+0.4
3,801,087	+				-2.1
3,801,087	+				-2.1
3,801,088	-				-1.2
3,801,093	+				-1.4
3,801,093	+				-0.4
3,801,094	-				+1.3
3,801,145	+				-1.4
3,801,145	+				-1.6
3,801,146	-				-0.2
3,801,146	-				-0.9
3,801,146	-				+0.7
3,801,202	-				+0.3
3,801,244	+		AO353_17190	0.11	-0.4
3,801,244	+		AO353_17190	0.11	+0.4
3,801,402	+		AO353_17190	0.23	-1.0
3,801,402	+		AO353_17190	0.23	-0.2
3,801,431	+		AO353_17190	0.25	-1.2
3,801,431	+		AO353_17190	0.25	-1.1
3,801,432	-		AO353_17190	0.25	+1.9
3,801,527	+		AO353_17190	0.32	-0.5
3,801,527	+		AO353_17190	0.32	+0.9
3,801,527	+		AO353_17190	0.32	-2.4
3,801,527	+		AO353_17190	0.32	-0.6
3,801,527	+		AO353_17190	0.32	-0.8
3,801,528	-		AO353_17190	0.32	-0.4
3,801,528	-		AO353_17190	0.32	+1.4
3,801,528	-		AO353_17190	0.32	-1.1
3,801,730	-		AO353_17190	0.47	-0.4
3,801,730	-		AO353_17190	0.47	-1.9
3,801,730	-		AO353_17190	0.47	-1.5
3,801,730	-		AO353_17190	0.47	-0.1
3,801,730	-		AO353_17190	0.47	-1.1
3,801,790	+		AO353_17190	0.52	-0.5
3,801,875	+		AO353_17190	0.58	-1.6
3,801,875	+		AO353_17190	0.58	-0.5
3,801,875	+		AO353_17190	0.58	-1.2
3,801,875	+		AO353_17190	0.58	-3.1
3,801,876	-		AO353_17190	0.58	-1.1
3,801,876	-		AO353_17190	0.58	-0.6
3,801,876	-		AO353_17190	0.58	+0.1
3,801,891	+		AO353_17190	0.59	-0.9
3,801,891	+		AO353_17190	0.59	+0.1
3,801,891	+		AO353_17190	0.59	-0.4
3,801,908	+		AO353_17190	0.60	+0.5
3,801,908	+		AO353_17190	0.60	-0.9
3,801,909	-		AO353_17190	0.60	-1.4
3,801,909	-		AO353_17190	0.60	-0.4
3,801,909	-		AO353_17190	0.60	-0.4
3,801,909	-		AO353_17190	0.60	-0.1
3,801,909	-		AO353_17190	0.60	-1.5
3,801,932	+		AO353_17190	0.62	-0.6
3,801,932	+		AO353_17190	0.62	-2.5
3,801,932	+		AO353_17190	0.62	-0.1
3,801,932	+		AO353_17190	0.62	-0.9
3,802,097	+		AO353_17190	0.74	+0.0
3,802,097	+		AO353_17190	0.74	-0.6
3,802,098	-		AO353_17190	0.74	-1.8
3,802,098	-		AO353_17190	0.74	-1.2
3,802,098	-		AO353_17190	0.74	-1.2
3,802,098	-		AO353_17190	0.74	+0.4
3,802,235	+		AO353_17190	0.85	-0.7
3,802,235	+		AO353_17190	0.85	-0.8
3,802,235	+		AO353_17190	0.85	-0.9
3,802,489	+				-1.0
3,802,636	+				-0.3
3,802,636	+				-2.4
3,802,637	-				+0.1
3,802,637	-				+2.8
3,802,689	+				-2.4
3,802,689	+				-0.2
3,802,690	-				+0.4
3,802,690	-				-0.1
3,802,690	-				-2.1
3,802,696	-				-1.6
3,802,882	+		AO353_17195	0.20	+0.4
3,802,882	+		AO353_17195	0.20	+0.6
3,802,882	+		AO353_17195	0.20	-0.1
3,802,882	+		AO353_17195	0.20	-0.1
3,802,949	+		AO353_17195	0.27	-2.4
3,802,949	+		AO353_17195	0.27	-0.5
3,802,949	+		AO353_17195	0.27	-0.9
3,802,949	+		AO353_17195	0.27	+0.7
3,802,950	-		AO353_17195	0.28	+1.9
3,802,950	-		AO353_17195	0.28	-0.5
3,802,950	-		AO353_17195	0.28	+1.3
3,802,950	-		AO353_17195	0.28	+0.5
3,802,950	-		AO353_17195	0.28	+0.1
3,802,950	-		AO353_17195	0.28	-0.6
3,802,950	-		AO353_17195	0.28	-0.9
3,802,950	-		AO353_17195	0.28	-0.2
3,803,044	+		AO353_17195	0.38	-0.4
3,803,044	+		AO353_17195	0.38	-0.2
3,803,044	+		AO353_17195	0.38	-1.2
3,803,045	-		AO353_17195	0.39	-0.9
3,803,045	-		AO353_17195	0.39	-2.4
3,803,045	-		AO353_17195	0.39	-1.6
3,803,045	-		AO353_17195	0.39	-0.8
3,803,045	-		AO353_17195	0.39	-1.6
3,803,045	-		AO353_17195	0.39	+1.5
3,803,045	-		AO353_17195	0.39	-0.2
3,803,089	+		AO353_17195	0.44	-1.2
3,803,090	-		AO353_17195	0.44	+0.3
3,803,292	+		AO353_17195	0.67	+1.9
3,803,292	+		AO353_17195	0.67	-0.2
3,803,293	-		AO353_17195	0.67	+0.8
3,803,420	-		AO353_17195	0.82	-1.0
3,803,421	+		AO353_17195	0.82	-0.1
3,803,421	+		AO353_17195	0.82	-0.9
3,803,421	+		AO353_17195	0.82	-1.2
3,803,422	-		AO353_17195	0.83	+1.3
3,803,422	-		AO353_17195	0.83	+0.4
3,803,422	-		AO353_17195	0.83	-0.2