Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16710

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,706,251	+		AO353_16705	0.60	+2.0
3,706,252	-		AO353_16705	0.60	+0.2
3,706,252	-		AO353_16705	0.60	-1.9
3,706,848	-		AO353_16705	0.87	+0.2
3,706,996	+				+0.8
3,706,996	+				+0.6
3,706,996	+				+0.3
3,706,996	+				-1.2
3,706,996	+				-1.0
3,706,996	+				+0.2
3,706,996	+				+0.0
3,706,996	+				-0.6
3,706,996	+				+0.0
3,706,996	+				+1.4
3,706,996	+				+2.2
3,706,996	+				-0.3
3,706,997	-				+1.4
3,706,997	-				-0.3
3,706,997	-				+0.6
3,706,997	-				+0.6
3,706,997	-				-0.4
3,706,997	-				+1.0
3,706,997	-				+0.8
3,706,997	-				-0.2
3,706,997	-				+0.1
3,706,998	+				+1.2
3,706,998	+				+1.3
3,706,998	+				-0.2
3,706,999	-				-0.1
3,706,999	-				+0.3
3,706,999	-				-0.5
3,706,999	-				+0.2
3,706,999	-				-0.4
3,707,055	+				-1.0
3,707,055	+				+0.0
3,707,055	+				+0.1
3,707,055	+				-1.8
3,707,056	-				-1.7
3,707,056	-				-0.8
3,707,056	-				+1.6
3,707,056	-				-0.6
3,707,088	+				+0.4
3,707,088	+				+0.6
3,707,089	-				-0.6
3,707,197	-		AO353_16710	0.15	-0.3
3,707,319	+		AO353_16710	0.47	-1.8
3,707,319	+		AO353_16710	0.47	+0.3
3,707,319	+		AO353_16710	0.47	+0.3
3,707,319	+		AO353_16710	0.47	-1.8
3,707,416	+		AO353_16710	0.72	-1.6
3,707,495	+				+0.1
3,707,495	+				-1.6
3,707,495	+				-1.6
3,707,495	+				-0.6
3,707,496	-				+1.0
3,707,496	-				-1.2
3,707,520	+				+1.8
3,707,520	+				-0.4
3,707,520	+				+1.8
3,707,521	-				-0.1
3,707,521	-				-0.1
3,707,525	+				-2.6
3,707,525	+				+0.3
3,707,525	+				+1.2
3,707,526	-				-0.3
3,707,564	-		AO353_16715	0.23	+1.0
3,707,734	+				+0.3
3,707,734	+				+0.4
3,707,734	+				-2.8
3,707,734	+				-1.3
3,707,734	+				-0.8
3,707,734	+				-1.3
3,707,734	+				+0.2
3,707,735	-				+1.1
3,707,735	-				-0.3
3,707,735	-				-0.9
3,707,926	+		AO353_16720	0.18	-0.8
3,707,927	-		AO353_16720	0.18	+1.0
3,707,927	-		AO353_16720	0.18	-0.2
3,708,210	+		AO353_16720	0.46	-1.0
3,708,210	+		AO353_16720	0.46	+0.4
3,708,210	+		AO353_16720	0.46	-1.4
3,708,210	+		AO353_16720	0.46	-1.9
3,708,210	+		AO353_16720	0.46	+0.4
3,708,210	+		AO353_16720	0.46	+0.1
3,708,211	-		AO353_16720	0.46	+0.1
3,708,232	+		AO353_16720	0.48	+0.4
3,708,232	+		AO353_16720	0.48	-1.4
3,708,233	-		AO353_16720	0.48	-2.6
3,708,233	-		AO353_16720	0.48	-0.4
3,708,233	-		AO353_16720	0.48	-0.3
3,708,233	-		AO353_16720	0.48	+0.4
3,708,233	-		AO353_16720	0.48	-0.1
3,708,265	+		AO353_16720	0.51	+0.3
3,708,265	+		AO353_16720	0.51	+0.6
3,708,265	+		AO353_16720	0.51	-0.3
3,708,265	+		AO353_16720	0.51	+3.0
3,708,265	+		AO353_16720	0.51	+0.3
3,708,265	+		AO353_16720	0.51	+0.8
3,708,265	+		AO353_16720	0.51	+1.7
3,708,265	+		AO353_16720	0.51	+0.1
3,708,265	+		AO353_16720	0.51	+0.0
3,708,266	-		AO353_16720	0.51	+0.8
3,708,266	-		AO353_16720	0.51	+0.2
3,708,266	-		AO353_16720	0.51	-1.4
3,708,266	-		AO353_16720	0.51	-1.0
3,708,266	-		AO353_16720	0.51	+0.2
3,708,266	-		AO353_16720	0.51	-1.3
3,708,266	-		AO353_16720	0.51	+0.1
3,708,266	-		AO353_16720	0.51	+0.2
3,708,266	-		AO353_16720	0.51	+0.1
3,708,266	-		AO353_16720	0.51	-1.5
3,708,266	-		AO353_16720	0.51	-1.0
3,708,266	-		AO353_16720	0.51	-0.3
3,708,266	-		AO353_16720	0.51	-0.3
3,708,266	-		AO353_16720	0.51	-0.3
3,708,266	-		AO353_16720	0.51	+0.6
3,708,266	-		AO353_16720	0.51	+0.1
3,708,266	-		AO353_16720	0.51	+0.9
3,708,266	-		AO353_16720	0.51	+0.0
3,708,266	-		AO353_16720	0.51	+0.0
3,708,311	+		AO353_16720	0.56	-0.2
3,708,311	+		AO353_16720	0.56	-0.4
3,708,311	+		AO353_16720	0.56	-0.8
3,708,312	-		AO353_16720	0.56	+0.6
3,708,312	-		AO353_16720	0.56	+0.8
3,708,312	-		AO353_16720	0.56	-0.6
3,708,312	-		AO353_16720	0.56	-1.2
3,708,369	+		AO353_16720	0.61	-0.1