Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15545

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,439,740	-		AO353_15540	0.61	+0.3
3,439,784	+		AO353_15540	0.63	-0.8
3,439,784	+		AO353_15540	0.63	-0.9
3,439,784	+		AO353_15540	0.63	-1.5
3,439,784	+		AO353_15540	0.63	+1.0
3,439,784	+		AO353_15540	0.63	+0.3
3,439,784	+		AO353_15540	0.63	+0.4
3,439,784	+		AO353_15540	0.63	-0.1
3,439,784	+		AO353_15540	0.63	+2.5
3,439,784	+		AO353_15540	0.63	-0.3
3,439,784	+		AO353_15540	0.63	-1.0
3,439,784	+		AO353_15540	0.63	-0.5
3,439,784	+		AO353_15540	0.63	+1.1
3,439,785	-		AO353_15540	0.63	+2.0
3,439,785	-		AO353_15540	0.63	+0.5
3,439,785	-		AO353_15540	0.63	-0.5
3,439,785	-		AO353_15540	0.63	-1.0
3,439,785	-		AO353_15540	0.63	+0.7
3,439,785	-		AO353_15540	0.63	-1.5
3,439,785	-		AO353_15540	0.63	-0.8
3,439,785	-		AO353_15540	0.63	-0.0
3,439,785	-		AO353_15540	0.63	+0.3
3,439,785	-		AO353_15540	0.63	+0.4
3,439,785	-		AO353_15540	0.63	+1.7
3,439,788	+		AO353_15540	0.63	-0.3
3,439,788	+		AO353_15540	0.63	-0.6
3,439,788	+		AO353_15540	0.63	+0.0
3,439,788	+		AO353_15540	0.63	-0.4
3,439,788	+		AO353_15540	0.63	+1.6
3,439,788	+		AO353_15540	0.63	+0.0
3,439,789	-		AO353_15540	0.63	+0.0
3,439,789	-		AO353_15540	0.63	-0.0
3,439,789	-		AO353_15540	0.63	+1.0
3,439,789	-		AO353_15540	0.63	-0.3
3,439,789	-		AO353_15540	0.63	-0.0
3,439,862	+		AO353_15540	0.66	-0.5
3,439,862	+		AO353_15540	0.66	-3.0
3,439,862	+		AO353_15540	0.66	+1.2
3,439,862	+		AO353_15540	0.66	-1.3
3,439,862	+		AO353_15540	0.66	-0.8
3,439,862	+		AO353_15540	0.66	+2.0
3,439,862	+		AO353_15540	0.66	-0.9
3,439,862	+		AO353_15540	0.66	-1.8
3,439,863	-		AO353_15540	0.66	-0.3
3,439,863	-		AO353_15540	0.66	-0.7
3,439,863	-		AO353_15540	0.66	+0.7
3,439,863	-		AO353_15540	0.66	-1.0
3,439,863	-		AO353_15540	0.66	-1.4
3,439,863	-		AO353_15540	0.66	+1.0
3,439,863	-		AO353_15540	0.66	+0.0
3,439,863	-		AO353_15540	0.66	-2.5
3,439,863	-		AO353_15540	0.66	-0.5
3,439,863	-		AO353_15540	0.66	+0.5
3,439,863	-		AO353_15540	0.66	-0.4
3,439,863	-		AO353_15540	0.66	-1.3
3,439,870	+		AO353_15540	0.66	-0.1
3,439,871	-		AO353_15540	0.66	+1.6
3,439,871	-		AO353_15540	0.66	+0.9
3,439,883	-		AO353_15540	0.67	-0.5
3,439,883	-		AO353_15540	0.67	-1.5
3,439,883	-		AO353_15540	0.67	-1.3
3,439,920	+		AO353_15540	0.68	+0.9
3,439,921	-		AO353_15540	0.68	-1.5
3,439,961	+		AO353_15540	0.70	+1.3
3,439,962	-		AO353_15540	0.70	+2.9
3,439,962	-		AO353_15540	0.70	-0.1
3,439,970	+		AO353_15540	0.70	+0.3
3,440,000	+		AO353_15540	0.71	+0.4
3,440,000	+		AO353_15540	0.71	+0.6
3,440,000	+		AO353_15540	0.71	+0.5
3,440,001	-		AO353_15540	0.71	-0.3
3,440,001	-		AO353_15540	0.71	-0.3
3,440,001	-		AO353_15540	0.71	+1.0
3,440,001	-		AO353_15540	0.71	+0.2
3,440,045	+		AO353_15540	0.73	-0.4
3,440,045	+		AO353_15540	0.73	-0.0
3,440,045	+		AO353_15540	0.73	-1.3
3,440,045	+		AO353_15540	0.73	+2.0
3,440,045	+		AO353_15540	0.73	+0.9
3,440,045	+		AO353_15540	0.73	+1.4
3,440,045	+		AO353_15540	0.73	-0.4
3,440,045	+		AO353_15540	0.73	+0.9
3,440,046	-		AO353_15540	0.73	-1.7
3,440,046	-		AO353_15540	0.73	-2.5
3,440,046	-		AO353_15540	0.73	+0.0
3,440,046	-		AO353_15540	0.73	-0.4
3,440,046	-		AO353_15540	0.73	-0.7
3,440,046	-		AO353_15540	0.73	+2.3
3,440,046	-		AO353_15540	0.73	-1.2
3,440,046	-		AO353_15540	0.73	+1.2
3,440,129	+		AO353_15540	0.77	+1.0
3,440,129	+		AO353_15540	0.77	+0.8
3,440,129	+		AO353_15540	0.77	+0.0
3,440,129	+		AO353_15540	0.77	-0.7
3,440,129	+		AO353_15540	0.77	+0.5
3,440,129	+		AO353_15540	0.77	-2.9
3,440,129	+		AO353_15540	0.77	-1.2
3,440,129	+		AO353_15540	0.77	-0.3
3,440,129	+		AO353_15540	0.77	-2.2
3,440,129	+		AO353_15540	0.77	-1.0
3,440,129	+		AO353_15540	0.77	-0.3
3,440,130	-		AO353_15540	0.77	-0.7
3,440,130	-		AO353_15540	0.77	+0.7
3,440,132	+		AO353_15540	0.77	-0.7
3,440,132	+		AO353_15540	0.77	-0.1
3,440,132	+		AO353_15540	0.77	+0.7
3,440,133	-		AO353_15540	0.77	+0.2
3,440,133	-		AO353_15540	0.77	-0.5
3,440,150	+		AO353_15540	0.77	+1.5
3,440,150	+		AO353_15540	0.77	+1.2
3,440,150	+		AO353_15540	0.77	-0.6
3,440,150	+		AO353_15540	0.77	-0.8
3,440,150	+		AO353_15540	0.77	-0.7
3,440,150	+		AO353_15540	0.77	+0.0
3,440,151	-		AO353_15540	0.77	-0.5
3,440,151	-		AO353_15540	0.77	-0.4
3,440,151	-		AO353_15540	0.77	-1.4
3,440,151	-		AO353_15540	0.77	+0.4
3,440,151	-		AO353_15540	0.77	-0.5
3,440,151	-		AO353_15540	0.77	-0.6
3,440,177	+		AO353_15540	0.78	+0.7
3,440,177	+		AO353_15540	0.78	+0.2
3,440,177	+		AO353_15540	0.78	-0.8
3,440,177	+		AO353_15540	0.78	-1.1
3,440,177	+		AO353_15540	0.78	-0.5
3,440,177	+		AO353_15540	0.78	-1.4
3,440,177	+		AO353_15540	0.78	-0.5
3,440,178	-		AO353_15540	0.78	+0.2
3,440,178	-		AO353_15540	0.78	+0.9
3,440,178	-		AO353_15540	0.78	+1.4
3,440,178	-		AO353_15540	0.78	-0.5
3,440,178	-		AO353_15540	0.78	+1.0
3,440,178	-		AO353_15540	0.78	+0.0
3,440,178	-		AO353_15540	0.78	+1.0
3,440,178	-		AO353_15540	0.78	-0.3
3,440,178	-		AO353_15540	0.78	+3.6
3,440,178	-		AO353_15540	0.78	-3.1
3,440,200	+		AO353_15540	0.79	-1.0
3,440,200	+		AO353_15540	0.79	-0.0
3,440,200	+		AO353_15540	0.79	-2.5
3,440,200	+		AO353_15540	0.79	+1.1
3,440,200	+		AO353_15540	0.79	+1.2
3,440,200	+		AO353_15540	0.79	+2.0
3,440,200	+		AO353_15540	0.79	+0.9
3,440,200	+		AO353_15540	0.79	+0.5
3,440,200	+		AO353_15540	0.79	+1.6
3,440,200	+		AO353_15540	0.79	+0.2
3,440,200	+		AO353_15540	0.79	-1.3
3,440,200	+		AO353_15540	0.79	-0.3
3,440,200	+		AO353_15540	0.79	+0.5
3,440,201	-		AO353_15540	0.79	-1.1
3,440,201	-		AO353_15540	0.79	+0.4
3,440,201	-		AO353_15540	0.79	-0.8
3,440,201	-		AO353_15540	0.79	+0.6
3,440,201	-		AO353_15540	0.79	+0.8
3,440,201	-		AO353_15540	0.79	+0.7
3,440,201	-		AO353_15540	0.79	+0.8
3,440,201	-		AO353_15540	0.79	+2.4
3,440,201	-		AO353_15540	0.79	+1.0
3,440,201	-		AO353_15540	0.79	+0.3
3,440,201	-		AO353_15540	0.79	+0.5
3,440,201	-		AO353_15540	0.79	-1.5
3,440,201	-		AO353_15540	0.79	+0.5
3,440,201	-		AO353_15540	0.79	-0.7
3,440,201	-		AO353_15540	0.79	+1.2
3,440,201	-		AO353_15540	0.79	+1.2
3,440,201	-		AO353_15540	0.79	-0.3
3,440,201	-		AO353_15540	0.79	-0.5
3,440,203	+		AO353_15540	0.79	+1.0
3,440,264	+		AO353_15540	0.82	+1.4
3,440,264	+		AO353_15540	0.82	+1.0
3,440,264	+		AO353_15540	0.82	-0.9
3,440,264	+		AO353_15540	0.82	-0.2
3,440,265	-		AO353_15540	0.82	-0.8
3,440,265	-		AO353_15540	0.82	+0.6
3,440,265	-		AO353_15540	0.82	-0.0
3,440,345	+		AO353_15540	0.85	+0.7
3,440,345	+		AO353_15540	0.85	-0.4
3,440,345	+		AO353_15540	0.85	-0.5
3,440,345	+		AO353_15540	0.85	+0.9
3,440,345	+		AO353_15540	0.85	-0.2
3,440,346	-		AO353_15540	0.85	-0.0
3,440,346	-		AO353_15540	0.85	-0.6
3,440,346	-		AO353_15540	0.85	+1.0
3,440,346	-		AO353_15540	0.85	+0.4
3,440,376	+		AO353_15540	0.86	+1.6
3,440,376	+		AO353_15540	0.86	-0.3
3,440,376	+		AO353_15540	0.86	+0.6
3,440,377	-		AO353_15540	0.87	-0.4
3,440,377	-		AO353_15540	0.87	-0.1
3,440,377	-		AO353_15540	0.87	+2.1
3,440,383	+		AO353_15540	0.87	+0.0
3,440,383	+		AO353_15540	0.87	+0.1
3,440,383	+		AO353_15540	0.87	-0.3
3,440,383	+		AO353_15540	0.87	-0.2
3,440,383	+		AO353_15540	0.87	-0.5
3,440,383	+		AO353_15540	0.87	-0.2
3,440,383	+		AO353_15540	0.87	-0.9
3,440,383	+		AO353_15540	0.87	-1.3
3,440,383	+		AO353_15540	0.87	+0.2
3,440,383	+		AO353_15540	0.87	-0.8
3,440,383	+		AO353_15540	0.87	+1.1
3,440,384	-		AO353_15540	0.87	-0.1
3,440,384	-		AO353_15540	0.87	-0.5
3,440,384	-		AO353_15540	0.87	-0.0
3,440,384	-		AO353_15540	0.87	+0.6
3,440,384	-		AO353_15540	0.87	-0.8
3,440,384	-		AO353_15540	0.87	-0.9
3,440,457	-		AO353_15540	0.90	+0.4
3,440,492	+				-1.1
3,440,492	+				+0.1
3,440,492	+				-2.2
3,440,492	+				+0.7
3,440,493	-				+0.7
3,440,493	-				+1.3
3,440,493	-				-0.9
3,440,493	-				+0.9
3,440,493	-				-0.7
3,440,590	+				+1.1
3,440,590	+				+0.6
3,440,590	+				-0.9
3,440,590	+				-2.0
3,440,590	+				+1.1
3,440,590	+				-0.2
3,440,591	-				+1.8
3,440,591	-				+1.1
3,440,591	-				-1.7
3,440,591	-				-1.4
3,440,701	-				+1.2
3,440,708	+				+0.1
3,440,708	+				+0.5
3,440,708	+				+1.5
3,440,738	-				+0.2
3,440,759	-				+0.1
3,440,983	+		AO353_15545	0.31	-1.4
3,441,039	+		AO353_15545	0.38	-1.4
3,441,040	-		AO353_15545	0.38	-1.6
3,441,228	+		AO353_15545	0.61	-0.9
3,441,269	+		AO353_15545	0.66	-0.8
3,441,269	+		AO353_15545	0.66	+1.6
3,441,270	-		AO353_15545	0.66	-1.5
3,441,270	-		AO353_15545	0.66	-0.5
3,441,277	-		AO353_15545	0.67	-0.1
3,441,319	+		AO353_15545	0.73	+0.1
3,441,320	-		AO353_15545	0.73	+0.2
3,441,372	+		AO353_15545	0.79	+0.1
3,441,372	+		AO353_15545	0.79	-0.6
3,441,372	+		AO353_15545	0.79	-1.9
3,441,372	+		AO353_15545	0.79	-0.3
3,441,373	-		AO353_15545	0.79	+1.1
3,441,373	-		AO353_15545	0.79	+0.1
3,441,373	-		AO353_15545	0.79	-2.2
3,441,377	-		AO353_15545	0.80	-1.9
3,441,525	-				-0.6
3,441,575	+				+1.3
3,441,575	+				-2.0
3,441,575	+				-1.0
3,441,575	+				+0.8
3,441,576	-				-1.9
3,441,576	-				+1.4
3,441,577	+				-1.3
3,441,577	+				-0.5
3,441,577	+				-0.9
3,441,577	+				+3.3
3,441,577	+				-2.1
3,441,577	+				-2.3
3,441,577	+				-0.8
3,441,578	-				-1.8
3,441,578	-				-0.9
3,441,578	-				+1.0
3,441,578	-				+0.5
3,441,593	-				-0.5
3,441,604	+				-0.8
3,441,605	-				+0.7
3,441,605	-				-3.8
3,441,615	+				+0.7
3,441,683	+				-1.4
3,441,683	+				+1.1
3,441,684	-				-1.0
3,441,684	-				-1.0
3,441,684	-				+2.5
3,441,684	-				-0.4
3,441,738	+				+0.8
3,441,834	+				-0.4
3,441,835	-				+0.0
3,441,835	-				-1.1
3,441,900	+		AO353_15550	0.15	+0.0
3,441,900	+		AO353_15550	0.15	-0.5
3,441,900	+		AO353_15550	0.15	+0.1
3,441,900	+		AO353_15550	0.15	-0.1
3,441,900	+		AO353_15550	0.15	+1.6
3,441,900	+		AO353_15550	0.15	+1.1
3,441,900	+		AO353_15550	0.15	+0.5
3,441,900	+		AO353_15550	0.15	-0.2
3,441,900	+		AO353_15550	0.15	-0.5
3,441,901	-		AO353_15550	0.15	+1.2
3,441,901	-		AO353_15550	0.15	-0.8
3,441,901	-		AO353_15550	0.15	+1.0
3,441,901	-		AO353_15550	0.15	+0.7
3,441,905	+		AO353_15550	0.15	-0.1
3,441,905	+		AO353_15550	0.15	+0.9
3,441,905	+		AO353_15550	0.15	+2.0
3,441,906	-		AO353_15550	0.15	+0.2
3,441,906	-		AO353_15550	0.15	-0.1
3,441,906	-		AO353_15550	0.15	+1.6
3,442,097	+		AO353_15550	0.30	-1.4
3,442,097	+		AO353_15550	0.30	-0.0
3,442,097	+		AO353_15550	0.30	+0.6
3,442,097	+		AO353_15550	0.30	-1.3
3,442,097	+		AO353_15550	0.30	+0.2
3,442,097	+		AO353_15550	0.30	+1.0
3,442,097	+		AO353_15550	0.30	-0.8
3,442,097	+		AO353_15550	0.30	-0.5
3,442,097	+		AO353_15550	0.30	+0.8
3,442,097	+		AO353_15550	0.30	+0.5
3,442,097	+		AO353_15550	0.30	+1.3
3,442,097	+		AO353_15550	0.30	+0.7
3,442,098	-		AO353_15550	0.30	-1.3
3,442,098	-		AO353_15550	0.30	-1.0
3,442,098	-		AO353_15550	0.30	+0.0
3,442,098	-		AO353_15550	0.30	+0.3
3,442,101	+		AO353_15550	0.30	+0.3
3,442,101	+		AO353_15550	0.30	+0.2
3,442,101	+		AO353_15550	0.30	+1.9
3,442,101	+		AO353_15550	0.30	-0.8
3,442,101	+		AO353_15550	0.30	-2.1
3,442,101	+		AO353_15550	0.30	+0.5
3,442,101	+		AO353_15550	0.30	+0.3
3,442,102	-		AO353_15550	0.30	+0.8
3,442,102	-		AO353_15550	0.30	+0.8
3,442,107	+		AO353_15550	0.31	-0.1
3,442,401	+		AO353_15550	0.53	-0.3
3,442,401	+		AO353_15550	0.53	-1.0
3,442,402	-		AO353_15550	0.53	-0.4
3,442,506	-		AO353_15550	0.61	+0.7
3,442,506	-		AO353_15550	0.61	+0.7
3,442,508	+		AO353_15550	0.62	-0.6
3,442,508	+		AO353_15550	0.62	-0.8
3,442,508	+		AO353_15550	0.62	+0.3
3,442,508	+		AO353_15550	0.62	-0.8
3,442,508	+		AO353_15550	0.62	+0.6
3,442,508	+		AO353_15550	0.62	+1.0
3,442,508	+		AO353_15550	0.62	-2.1
3,442,509	-		AO353_15550	0.62	+0.4
3,442,509	-		AO353_15550	0.62	-1.3
3,442,509	-		AO353_15550	0.62	+1.2
3,442,509	-		AO353_15550	0.62	+1.0
3,442,509	-		AO353_15550	0.62	-1.8
3,442,509	-				+1.6
3,442,509	-		AO353_15550	0.62	+0.5
3,442,509	-		AO353_15550	0.62	-0.3
3,442,509	-		AO353_15550	0.62	-2.6
3,442,518	+		AO353_15550	0.62	-0.2
3,442,519	-		AO353_15550	0.62	+0.2
3,442,519	-		AO353_15550	0.62	+0.5
3,442,524	+		AO353_15550	0.63	+0.5
3,442,524	+		AO353_15550	0.63	-0.2
3,442,524	+		AO353_15550	0.63	-0.4
3,442,524	+		AO353_15550	0.63	+0.3
3,442,524	+		AO353_15550	0.63	+0.8
3,442,524	+		AO353_15550	0.63	+1.2
3,442,525	-		AO353_15550	0.63	-1.3
3,442,525	-		AO353_15550	0.63	+1.0
3,442,525	-		AO353_15550	0.63	-1.9
3,442,525	-		AO353_15550	0.63	-0.9