Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15500

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,423,461	-		AO353_15495	0.29	+0.1
3,423,496	+		AO353_15495	0.32	-0.7
3,423,963	+		AO353_15495	0.68	+0.8
3,423,963	+		AO353_15495	0.68	-0.8
3,423,963	+		AO353_15495	0.68	+0.7
3,423,963	+		AO353_15495	0.68	+1.0
3,423,964	-		AO353_15495	0.68	+0.2
3,423,964	-		AO353_15495	0.68	-0.3
3,423,964	-		AO353_15495	0.68	-1.0
3,423,964	-		AO353_15495	0.68	+0.8
3,423,964	-		AO353_15495	0.68	+0.8
3,424,012	+		AO353_15495	0.72	+0.6
3,424,012	+		AO353_15495	0.72	+0.6
3,424,012	+		AO353_15495	0.72	-2.0
3,424,012	+		AO353_15495	0.72	-0.1
3,424,012	+		AO353_15495	0.72	-0.5
3,424,012	+		AO353_15495	0.72	+0.9
3,424,013	-		AO353_15495	0.72	-1.7
3,424,013	-		AO353_15495	0.72	+0.2
3,424,013	-		AO353_15495	0.72	+0.3
3,424,013	-		AO353_15495	0.72	+1.8
3,424,045	+		AO353_15495	0.74	+1.5
3,424,045	+		AO353_15495	0.74	-1.4
3,424,045	+		AO353_15495	0.74	-1.8
3,424,046	-		AO353_15495	0.74	+2.3
3,424,046	-		AO353_15495	0.74	+1.0
3,424,046	-		AO353_15495	0.74	-0.5
3,424,046	-		AO353_15495	0.74	-0.2
3,424,046	-		AO353_15495	0.74	-0.3
3,424,095	+		AO353_15495	0.78	+1.2
3,424,096	-		AO353_15495	0.78	+0.7
3,424,096	-		AO353_15495	0.78	+0.6
3,424,096	-		AO353_15495	0.78	-0.0
3,424,096	-		AO353_15495	0.78	-0.4
3,424,323	-				+0.5
3,424,326	-				+0.5
3,424,338	+				+0.2
3,424,338	+				+0.2
3,424,338	+				-0.8
3,424,338	+				-1.4
3,424,338	+				+0.8
3,424,338	+				+0.9
3,424,338	+				-1.1
3,424,338	+				-0.4
3,424,338	+				+1.7
3,424,339	-				-1.2
3,424,339	-				+0.4
3,424,339	-				-0.3
3,424,339	-				-0.5
3,424,339	-				-2.1
3,424,339	-				-1.9
3,424,339	-				-0.3
3,424,364	+				-0.1
3,424,364	+				-1.1
3,424,364	+				+0.5
3,424,364	+				-1.7
3,424,364	+				+1.0
3,424,364	+				+1.5
3,424,364	+				-1.3
3,424,364	+				+0.0
3,424,364	+				-1.5
3,424,364	+				+0.7
3,424,364	+				+1.0
3,424,364	+				-2.0
3,424,364	+				+1.6
3,424,364	+				-0.3
3,424,364	+				+0.5
3,424,364	+				-0.9
3,424,364	+				+0.5
3,424,364	+				-0.0
3,424,365	-				+0.0
3,424,365	-				+1.3
3,424,365	-				+0.0
3,424,365	-				+0.0
3,424,365	-				-2.2
3,424,365	-				-1.3
3,424,365	-				+0.8
3,424,365	-				+1.4
3,424,365	-				-0.3
3,424,365	-				+0.9
3,424,365	-				-0.4
3,424,365	-				-0.5
3,424,365	-				-0.7
3,424,365	-				+0.8
3,424,368	+				+0.2
3,424,368	+				+0.4
3,424,368	+				-1.5
3,424,368	+				-1.0
3,424,368	+				-0.4
3,424,368	+				+0.4
3,424,368	+				+0.9
3,424,368	+				-0.4
3,424,368	+				-1.9
3,424,368	+				+1.0
3,424,368	+				-0.7
3,424,368	+				-0.8
3,424,368	+				-0.9
3,424,368	+				-0.8
3,424,368	+				-0.1
3,424,368	+				-1.1
3,424,368	+				-0.8
3,424,368	+				+0.8
3,424,368	+				+1.2
3,424,368	+				+1.0
3,424,368	+				-0.5
3,424,368	+				+2.0
3,424,368	+				+0.6
3,424,369	-				+0.6
3,424,369	-				-0.4
3,424,369	-				+0.2
3,424,369	-				-1.5
3,424,369	-				-0.7
3,424,369	-				+0.0
3,424,369	-				+0.1
3,424,369	-				+0.4
3,424,369	-				+0.6
3,424,369	-				+0.8
3,424,369	-				+1.0
3,424,369	-				+1.0
3,424,369	-				+0.5
3,424,369	-				-2.0
3,424,369	-				-0.1
3,424,369	-				+0.8
3,424,394	+				-1.0
3,424,397	+				-0.1
3,424,397	+				-0.4
3,424,397	+				-0.5
3,424,397	+				+0.2
3,424,397	+				-0.6
3,424,398	-				-1.5
3,424,398	-				-1.5
3,424,398	-				-1.3
3,424,398	-				+1.2
3,424,417	+				+0.8
3,424,417	+				-1.0
3,424,417	+				+0.3
3,424,417	+				+1.0
3,424,418	-				+0.9
3,424,418	-				+0.7
3,424,418	-				+0.7
3,424,418	-				-0.3
3,424,418	-				-0.5
3,424,492	+				+0.2
3,424,492	+				+0.3
3,424,492	+				-1.2
3,424,492	+				-1.1
3,424,492	+				-0.8
3,424,492	+				-0.5
3,424,492	+				-1.3
3,424,493	-				-1.1
3,424,493	-				-0.5
3,424,493	-				-2.0
3,424,493	-				-2.2
3,424,553	+				-0.5
3,424,553	+				+0.5
3,424,553	+				+1.0
3,424,553	+				-1.0
3,424,554	-				-0.9
3,424,647	+		AO353_15500	0.15	-1.5
3,424,647	+		AO353_15500	0.15	-0.1
3,424,647	+		AO353_15500	0.15	-1.2
3,424,737	+		AO353_15500	0.21	+0.2
3,424,737	+		AO353_15500	0.21	-1.0
3,424,738	-		AO353_15500	0.21	-1.1
3,424,738	-		AO353_15500	0.21	-0.2
3,424,909	+		AO353_15500	0.34	-0.3
3,424,909	+		AO353_15500	0.34	-0.8
3,424,909	+		AO353_15500	0.34	-0.8
3,424,909	+		AO353_15500	0.34	-1.3
3,424,909	+		AO353_15500	0.34	+0.3
3,424,909	+		AO353_15500	0.34	-1.1
3,424,909	+		AO353_15500	0.34	-1.5
3,424,909	+		AO353_15500	0.34	+0.0
3,424,909	+		AO353_15500	0.34	-1.1
3,424,909	+		AO353_15500	0.34	+0.0
3,424,909	+		AO353_15500	0.34	-1.1
3,424,910	-		AO353_15500	0.34	-0.4
3,424,910	-		AO353_15500	0.34	-2.0
3,424,910	-		AO353_15500	0.34	+0.2
3,424,910	-		AO353_15500	0.34	-0.9
3,424,910	-		AO353_15500	0.34	-1.4
3,424,910	-		AO353_15500	0.34	-1.5
3,424,910	-		AO353_15500	0.34	-0.5
3,424,910	-		AO353_15500	0.34	-2.2
3,424,910	-		AO353_15500	0.34	-0.5
3,424,910	-		AO353_15500	0.34	-0.5
3,424,910	-		AO353_15500	0.34	+0.7
3,424,910	-		AO353_15500	0.34	-0.5
3,424,910	-		AO353_15500	0.34	-2.3
3,424,910	-		AO353_15500	0.34	-0.2
3,424,910	-		AO353_15500	0.34	-1.0
3,424,910	-		AO353_15500	0.34	-1.0
3,424,912	+		AO353_15500	0.34	-0.5
3,424,912	+		AO353_15500	0.34	-1.7
3,424,912	+		AO353_15500	0.34	-1.0
3,424,912	+		AO353_15500	0.34	+0.7
3,424,912	+		AO353_15500	0.34	-2.7
3,424,912	+		AO353_15500	0.34	+0.3
3,424,912	+		AO353_15500	0.34	-0.2
3,424,912	+		AO353_15500	0.34	-1.3
3,424,912	+		AO353_15500	0.34	+0.3
3,424,912	+		AO353_15500	0.34	-0.2
3,424,913	-		AO353_15500	0.34	-0.5
3,424,913	-		AO353_15500	0.34	-2.6
3,424,913	-		AO353_15500	0.34	-0.8
3,424,913	-		AO353_15500	0.34	-1.2
3,424,913	-		AO353_15500	0.34	-1.1
3,424,913	-		AO353_15500	0.34	-2.0
3,424,913	-		AO353_15500	0.34	-1.1
3,424,913	-		AO353_15500	0.34	-1.0
3,424,913	-		AO353_15500	0.34	-2.3
3,425,283	+		AO353_15500	0.61	-0.8
3,425,283	+		AO353_15500	0.61	-1.6
3,425,284	-		AO353_15500	0.61	+1.0
3,425,284	-		AO353_15500	0.61	-2.2
3,425,284	-		AO353_15500	0.61	-1.7
3,425,284	-		AO353_15500	0.61	-0.6
3,425,389	+		AO353_15500	0.69	-0.5
3,425,389	+		AO353_15500	0.69	-1.1
3,425,390	-		AO353_15500	0.69	-1.0
3,425,390	-		AO353_15500	0.69	-2.0
3,425,392	+		AO353_15500	0.69	-0.2
3,425,393	-		AO353_15500	0.69	-1.8
3,425,393	-		AO353_15500	0.69	+0.0
3,425,393	-		AO353_15500	0.69	+0.5
3,425,393	-		AO353_15500	0.69	-0.0
3,425,393	-		AO353_15500	0.69	-2.6
3,425,393	-		AO353_15500	0.69	-0.1
3,425,455	+		AO353_15500	0.73	+1.0
3,425,822	+				-0.3
3,425,830	+				+0.9
3,425,844	+				-1.3
3,425,845	-				+0.5
3,425,882	+				-1.1
3,425,882	+				-1.6
3,425,882	+				+0.6
3,425,882	+				-0.3
3,425,882	+				-0.8
3,425,882	+				-0.2
3,425,882	+				-2.5
3,425,882	+				+0.6
3,425,882	+				-2.9
3,425,882	+				-1.5
3,425,882	+				-0.8
3,425,882	+				-0.1
3,425,882	+				+0.9
3,425,882	+				+0.7
3,425,882	+				-0.1
3,425,882	+				+0.5
3,425,882	+				-0.3
3,425,882	+				+0.9
3,425,882	+				-0.3
3,425,882	+				-0.6
3,425,882	+				-0.5
3,425,882	+				-1.4
3,425,882	+				-1.8
3,425,882	+				-0.4
3,425,882	+				-0.2
3,425,882	+				-0.1
3,425,882	+				-1.3
3,425,882	+				-2.5
3,425,882	+				+0.0
3,425,882	+				-1.9
3,425,882	+				-1.8
3,425,882	+				-1.9
3,425,882	+				-0.4
3,425,882	+				-2.0
3,425,882	+				-0.2
3,425,882	+				-2.3
3,425,882	+				+0.8
3,425,882	+				-1.4
3,425,882	+				+2.6
3,425,882	+				+1.5
3,425,882	+				-0.3
3,425,882	+				+0.2
3,425,882	+				+3.0
3,425,882	+				-0.6
3,425,882	+				-0.7
3,425,882	+				-0.3
3,425,882	+				-0.8
3,425,882	+				+0.0
3,425,882	+				-0.1
3,425,883	-				+0.9
3,425,883	-				+0.4
3,425,883	-				-0.1
3,425,883	-				+1.7
3,425,883	-				-0.5
3,425,883	-				-0.5
3,425,883	-				-0.1
3,425,883	-				+0.6
3,425,883	-				-0.5
3,425,883	-				+0.2
3,425,883	-				-1.0
3,425,883	-				+0.0
3,425,883	-				-2.3
3,425,883	-				-0.3
3,425,883	-				-1.0
3,425,883	-				+1.3
3,425,883	-				-0.0
3,425,883	-				+0.5
3,425,883	-				-0.1
3,425,883	-				+1.6
3,425,883	-				-1.2
3,425,883	-				+2.0
3,425,883	-				-1.0
3,425,883	-				+1.2
3,425,883	-				+0.8
3,425,883	-				+1.3
3,425,883	-				-0.1
3,425,883	-				+0.0
3,425,883	-				+1.3
3,425,883	-				+1.0
3,425,883	-				+0.5
3,425,943	+				-0.5
3,425,982	+				+0.2
3,425,982	+				-3.0
3,425,982	+				-1.7
3,425,983	-				-0.3
3,425,983	-				+0.8
3,425,983	-				+0.4
3,425,983	-				+0.8
3,425,983	-				-1.0
3,426,179	+		AO353_15505	0.24	-0.4
3,426,179	+		AO353_15505	0.24	+0.0
3,426,180	-		AO353_15505	0.24	-0.3
3,426,189	+		AO353_15505	0.25	-1.5
3,426,211	+		AO353_15505	0.27	-2.0
3,426,211	+		AO353_15505	0.27	+0.9
3,426,212	-		AO353_15505	0.27	-1.7
3,426,427	+		AO353_15505	0.50	-1.0
3,426,427	+		AO353_15505	0.50	-0.7
3,426,564	+		AO353_15505	0.64	+0.1
3,426,564	+		AO353_15505	0.64	+0.3
3,426,564	+		AO353_15505	0.64	+1.8
3,426,564	+		AO353_15505	0.64	-1.0
3,426,564	+		AO353_15505	0.64	+1.0
3,426,564	+		AO353_15505	0.64	+1.3
3,426,564	+		AO353_15505	0.64	-0.3
3,426,564	+		AO353_15505	0.64	-0.5
3,426,564	+		AO353_15505	0.64	-0.2
3,426,565	-		AO353_15505	0.64	+0.4
3,426,565	-		AO353_15505	0.64	-0.9
3,426,565	-		AO353_15505	0.64	-0.1
3,426,565	-		AO353_15505	0.64	-1.3
3,426,565	-		AO353_15505	0.64	-1.6
3,426,571	-		AO353_15505	0.65	-0.1
3,426,588	+		AO353_15505	0.67	+1.0
3,426,588	+		AO353_15505	0.67	-0.4
3,426,588	+		AO353_15505	0.67	-0.1
3,426,589	-		AO353_15505	0.67	-0.3
3,426,589	-		AO353_15505	0.67	+0.5
3,426,623	-		AO353_15505	0.70	+0.0
3,426,635	+		AO353_15505	0.72	-0.5
3,426,635	+		AO353_15505	0.72	+0.5
3,426,635	+		AO353_15505	0.72	+0.8
3,426,636	-		AO353_15505	0.72	-1.9
3,426,771	+		AO353_15505	0.86	-1.5
3,426,772	-		AO353_15505	0.86	+3.9
3,426,772	-		AO353_15505	0.86	+0.7
3,426,772	-		AO353_15505	0.86	-1.1
3,426,772	-		AO353_15505	0.86	-0.3
3,426,780	+		AO353_15505	0.87	-2.9
3,426,780	+		AO353_15505	0.87	-0.6
3,426,780	+		AO353_15505	0.87	-0.3
3,426,780	+		AO353_15505	0.87	-1.3
3,426,780	+		AO353_15505	0.87	-0.7
3,426,780	+		AO353_15505	0.87	-0.1
3,426,780	+		AO353_15505	0.87	-0.3
3,426,780	+		AO353_15505	0.87	-1.3
3,426,780	+		AO353_15505	0.87	+0.3
3,426,781	-		AO353_15505	0.87	-1.4
3,426,781	-		AO353_15505	0.87	-2.8
3,426,781	-		AO353_15505	0.87	-0.5
3,426,781	-		AO353_15505	0.87	-0.8
3,426,781	-		AO353_15505	0.87	-2.3
3,426,781	-		AO353_15505	0.87	-2.1
3,426,781	-		AO353_15505	0.87	-0.3
3,426,792	+		AO353_15505	0.88	-0.1
3,426,792	+		AO353_15505	0.88	-1.0
3,426,792	+		AO353_15505	0.88	-1.4
3,426,793	-		AO353_15505	0.88	-0.2
3,426,793	-		AO353_15505	0.88	-2.8