Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15285

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,374,813	-		AO353_15275	0.67	-0.3
3,374,874	+		AO353_15275	0.78	+0.1
3,375,019	-				+0.2
3,375,019	-				-0.9
3,375,019	-				-0.8
3,375,019	-				-0.4
3,375,019	-				+0.1
3,375,019	-				-0.6
3,375,019	-				+1.5
3,375,019	-				+0.2
3,375,019	-				+1.0
3,375,019	-				+0.2
3,375,019	-				+0.5
3,375,019	-				+0.1
3,375,019	-				-0.8
3,375,023	-				+3.1
3,375,023	-				-2.3
3,375,023	-				+1.5
3,375,023	-				-0.8
3,375,023	-				-1.0
3,375,160	-				+0.1
3,375,160	-				-0.0
3,375,221	-		AO353_15280	0.25	-1.3
3,375,221	-		AO353_15280	0.25	+0.4
3,375,319	-		AO353_15280	0.56	-0.5
3,375,319	-		AO353_15280	0.56	+0.2
3,375,319	-		AO353_15280	0.56	-0.5
3,375,319	-		AO353_15280	0.56	-1.7
3,375,319	-		AO353_15280	0.56	-0.6
3,375,321	+		AO353_15280	0.57	+0.2
3,375,322	-		AO353_15280	0.57	+1.2
3,375,322	-		AO353_15280	0.57	-0.7
3,375,322	-		AO353_15280	0.57	+0.7
3,375,322	-		AO353_15280	0.57	+0.1
3,375,322	-		AO353_15280	0.57	-2.5
3,375,322	-		AO353_15280	0.57	+0.5
3,375,322	-		AO353_15280	0.57	-0.3
3,375,322	-		AO353_15280	0.57	-0.5
3,375,322	-		AO353_15280	0.57	-0.4
3,375,327	-		AO353_15280	0.58	-0.5
3,375,365	+		AO353_15280	0.70	-2.0
3,375,366	-		AO353_15280	0.71	+0.1
3,375,481	+				-0.5
3,375,482	-				-1.0
3,375,482	-				-2.3
3,375,657	+		AO353_15285	0.10	+0.1
3,375,778	-		AO353_15285	0.17	-1.1
3,375,778	-		AO353_15285	0.17	-0.3
3,375,806	+		AO353_15285	0.19	-1.8
3,375,806	+		AO353_15285	0.19	-0.2
3,375,806	+		AO353_15285	0.19	-2.6
3,375,806	+		AO353_15285	0.19	-1.4
3,375,807	-		AO353_15285	0.19	+0.3
3,375,807	-		AO353_15285	0.19	-1.1
3,375,807	-		AO353_15285	0.19	+0.1
3,375,807	-		AO353_15285	0.19	-1.6
3,375,807	-		AO353_15285	0.19	-1.3
3,375,822	+		AO353_15285	0.19	-1.6
3,375,823	-		AO353_15285	0.19	-0.3
3,375,953	+		AO353_15285	0.27	-0.4
3,375,953	+		AO353_15285	0.27	+0.5
3,375,954	-		AO353_15285	0.27	-0.9
3,376,254	+		AO353_15285	0.43	-1.0
3,376,254	+		AO353_15285	0.43	-0.5
3,376,254	+		AO353_15285	0.43	-0.6
3,376,254	+		AO353_15285	0.43	-1.4
3,376,255	-		AO353_15285	0.43	-0.1
3,376,369	-		AO353_15285	0.50	+0.5
3,376,404	+		AO353_15285	0.52	-0.9
3,376,404	+		AO353_15285	0.52	+0.1
3,376,404	+		AO353_15285	0.52	+0.5
3,376,404	+		AO353_15285	0.52	-0.0
3,376,404	+		AO353_15285	0.52	+0.4
3,376,405	-		AO353_15285	0.52	-1.4
3,376,405	-		AO353_15285	0.52	-0.1
3,376,405	-		AO353_15285	0.52	-1.3
3,376,405	-		AO353_15285	0.52	-1.3
3,376,405	-		AO353_15285	0.52	+0.5
3,376,449	+		AO353_15285	0.54	-1.5
3,376,449	+		AO353_15285	0.54	-2.5
3,376,450	-		AO353_15285	0.54	-0.3
3,376,655	-		AO353_15285	0.65	-1.4
3,376,883	+		AO353_15285	0.78	+0.1
3,376,883	+		AO353_15285	0.78	+0.1
3,376,883	+		AO353_15285	0.78	-2.8
3,376,883	+		AO353_15285	0.78	+0.6
3,376,883	+		AO353_15285	0.78	-1.7
3,376,883	+		AO353_15285	0.78	-2.0
3,376,883	+		AO353_15285	0.78	-0.3
3,376,883	+		AO353_15285	0.78	-1.5
3,376,883	+		AO353_15285	0.78	-1.3
3,376,883	+		AO353_15285	0.78	-0.5
3,376,883	+		AO353_15285	0.78	-0.6
3,376,883	+		AO353_15285	0.78	-2.0
3,376,884	-		AO353_15285	0.78	+0.1
3,376,884	-		AO353_15285	0.78	-0.7
3,376,884	-		AO353_15285	0.78	-0.9
3,376,884	-		AO353_15285	0.78	+1.3
3,376,884	-		AO353_15285	0.78	-0.2
3,376,884	-		AO353_15285	0.78	-0.3
3,376,884	-		AO353_15285	0.78	-1.4
3,376,884	-		AO353_15285	0.78	-1.4
3,377,001	+		AO353_15285	0.84	-1.7
3,377,001	+		AO353_15285	0.84	-0.7
3,377,001	+		AO353_15285	0.84	-1.1
3,377,001	+		AO353_15285	0.84	-2.3
3,377,001	+		AO353_15285	0.84	-2.1
3,377,001	+		AO353_15285	0.84	-0.5
3,377,002	-		AO353_15285	0.85	-0.5
3,377,002	-		AO353_15285	0.85	-0.7
3,377,002	-		AO353_15285	0.85	-1.0
3,377,002	-		AO353_15285	0.85	-2.6
3,377,002	-		AO353_15285	0.85	-1.4
3,377,002	-		AO353_15285	0.85	-1.2
3,377,003	+		AO353_15285	0.85	-0.9
3,377,003	+		AO353_15285	0.85	-1.3
3,377,003	+		AO353_15285	0.85	-1.4
3,377,003	+		AO353_15285	0.85	-2.3
3,377,004	-		AO353_15285	0.85	-0.3
3,377,004	-		AO353_15285	0.85	-1.2
3,377,004	-		AO353_15285	0.85	-2.5
3,377,004	-		AO353_15285	0.85	+1.7
3,377,004	-		AO353_15285	0.85	-0.1
3,377,004	-		AO353_15285	0.85	+0.7
3,377,004	-		AO353_15285	0.85	-1.6
3,377,004	-		AO353_15285	0.85	-2.6
3,377,004	-		AO353_15285	0.85	-0.3
3,377,283	+				+0.5
3,377,283	+				-0.3
3,377,283	+				+2.1
3,377,283	+				-0.1
3,377,283	+				+0.5
3,377,283	+				+0.5
3,377,283	+				-1.3
3,377,283	+				-0.3
3,377,283	+				-2.8
3,377,283	+				-0.6
3,377,283	+				-1.1
3,377,284	-				-0.9
3,377,284	-				-0.7
3,377,284	-				-0.1
3,377,284	-				-1.3
3,377,284	-				-2.6
3,377,284	-				-0.9
3,377,284	-				-0.3
3,377,284	-				-0.7
3,377,284	-				-0.6
3,377,284	-				-0.7
3,377,284	-				-0.1
3,377,284	-				-0.9
3,377,284	-				-1.4
3,377,284	-				-0.3
3,377,284	-				-1.9
3,377,284	-				-1.1
3,377,308	+				-1.6
3,377,308	+				+0.3
3,377,308	+				-1.1
3,377,309	-				-1.6
3,377,309	-				-0.4
3,377,321	+				-1.4
3,377,322	-				+0.0
3,377,322	-				-1.4
3,377,350	-				-1.1
3,377,371	+				-1.9
3,377,372	-				-0.2
3,377,372	-				-1.6
3,377,372	-				-0.1
3,377,380	+				-1.4
3,377,380	+				-0.5
3,377,380	+				-1.8
3,377,380	+				-2.2
3,377,380	+				-0.4
3,377,380	+				-2.3
3,377,380	+				-0.3
3,377,381	-				-2.5
3,377,381	-				+0.1
3,377,381	-				+0.9
3,377,381	-				+0.1
3,377,381	-				-2.4
3,377,381	-				-1.0
3,377,388	-				+1.0
3,377,432	+				+0.4
3,377,433	-				-1.3
3,377,433	-				-0.7
3,377,447	+				-0.3
3,377,447	+				-0.2
3,377,448	-				+1.1
3,377,454	+				-2.0
3,377,454	+				+0.7
3,377,455	-				-1.9
3,377,455	-				-0.4
3,377,532	+				-2.9
3,377,532	+				-1.0
3,377,532	+				-0.3
3,377,532	+				-0.7
3,377,532	+				+0.3
3,377,532	+				-0.7
3,377,532	+				+0.2
3,377,533	-				+1.1
3,377,533	-				-1.3
3,377,533	-				-1.1
3,377,533	-				-0.6
3,377,533	-				-0.9
3,377,796	+		AO353_15290	0.35	-0.1
3,377,828	+		AO353_15290	0.39	+0.3
3,377,828	+		AO353_15290	0.39	-0.7
3,377,828	+		AO353_15290	0.39	+0.1
3,377,829	-		AO353_15290	0.39	-0.8
3,377,829	-		AO353_15290	0.39	+0.5
3,377,829	-		AO353_15290	0.39	+0.1
3,377,829	-		AO353_15290	0.39	+0.6
3,377,829	-		AO353_15290	0.39	-0.3
3,377,836	+		AO353_15290	0.40	+0.5
3,377,836	+		AO353_15290	0.40	-0.2
3,377,836	+		AO353_15290	0.40	-0.5
3,377,836	+		AO353_15290	0.40	-2.0
3,377,836	+		AO353_15290	0.40	-0.5
3,377,836	+		AO353_15290	0.40	-0.4
3,377,837	-				+2.1
3,377,837	-				-0.3
3,377,837	-		AO353_15290	0.40	-1.7
3,377,837	-		AO353_15290	0.40	+1.1
3,377,837	-		AO353_15290	0.40	-1.0
3,377,837	-		AO353_15290	0.40	-1.6
3,377,837	-		AO353_15290	0.40	-1.7
3,377,837	-		AO353_15290	0.40	-0.7
3,377,965	+		AO353_15290	0.54	-0.2
3,377,982	-		AO353_15290	0.56	+0.1
3,377,995	-		AO353_15290	0.58	+1.3
3,377,995	-		AO353_15290	0.58	-1.3
3,378,043	+		AO353_15290	0.63	-3.7
3,378,043	+		AO353_15290	0.63	+0.5
3,378,043	+		AO353_15290	0.63	-1.2
3,378,043	+		AO353_15290	0.63	-3.2
3,378,043	+		AO353_15290	0.63	+1.5
3,378,043	+		AO353_15290	0.63	-1.1
3,378,044	-		AO353_15290	0.63	-1.1
3,378,044	-		AO353_15290	0.63	-1.1
3,378,044	-		AO353_15290	0.63	-1.7
3,378,044	-		AO353_15290	0.63	-0.5
3,378,044	-		AO353_15290	0.63	-0.9
3,378,149	+		AO353_15290	0.75	+0.5
3,378,149	+		AO353_15290	0.75	-1.3
3,378,239	+		AO353_15290	0.86	-0.7
3,378,239	+		AO353_15290	0.86	-0.5
3,378,239	+		AO353_15290	0.86	-0.7
3,378,239	+		AO353_15290	0.86	+0.1