Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15005

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,315,763	+		AO353_15000	0.33	+1.3
3,315,769	+		AO353_15000	0.33	+0.5
3,315,769	+		AO353_15000	0.33	+1.0
3,315,770	-		AO353_15000	0.34	-0.9
3,315,770	-		AO353_15000	0.34	-0.9
3,315,770	-		AO353_15000	0.34	-0.1
3,316,039	-		AO353_15000	0.61	+0.8
3,316,243	+		AO353_15000	0.83	+0.3
3,316,243	+		AO353_15000	0.83	+0.8
3,316,243	+		AO353_15000	0.83	-1.1
3,316,244	-		AO353_15000	0.83	-0.1
3,316,388	+				-1.2
3,316,412	+				-1.8
3,316,412	+				+1.8
3,316,412	+				-1.5
3,316,413	-				-0.4
3,316,413	-				+0.3
3,316,413	-				+0.3
3,316,418	+				-1.6
3,316,418	+				-1.9
3,316,418	+				+0.9
3,316,418	+				+1.1
3,316,419	-				-0.8
3,316,419	-				-1.0
3,316,419	-				+0.4
3,316,419	-				+0.1
3,316,419	-				-1.3
3,316,445	+				-1.3
3,316,445	+				-0.1
3,316,445	+				-1.8
3,316,446	-				+0.9
3,316,446	-				-0.7
3,316,460	-				-0.7
3,316,460	-				+0.2
3,316,479	+				+0.6
3,316,480	-				-0.1
3,316,491	+				+0.4
3,316,491	+				+1.4
3,316,492	-				+0.9
3,316,492	-				-0.8
3,316,492	-				+0.1
3,316,569	-				-1.5
3,316,643	+				+1.4
3,316,685	+				+1.2
3,316,686	-				-0.2
3,316,702	+				-0.4
3,316,702	+				+0.7
3,316,702	+				+1.1
3,316,702	+				+0.3
3,316,702	+				+1.5
3,316,702	+				-0.6
3,316,702	+				-0.5
3,316,702	+				+0.2
3,316,703	-				-0.4
3,316,703	-				-1.0
3,316,703	-				-0.1
3,316,703	-				+0.5
3,316,703	-				+0.8
3,316,703	-				+0.7
3,316,703	-				+0.8
3,316,703	-				-2.5
3,316,703	-				-0.1
3,316,864	+		AO353_15005	0.26	+1.2
3,316,942	+		AO353_15005	0.39	+0.3
3,316,943	-		AO353_15005	0.39	+0.2
3,316,943	-		AO353_15005	0.39	-1.2
3,316,951	+		AO353_15005	0.40	+1.4
3,316,951	+		AO353_15005	0.40	-0.1
3,316,951	+		AO353_15005	0.40	+0.6
3,316,952	-		AO353_15005	0.40	+0.3
3,316,952	-		AO353_15005	0.40	-1.8
3,317,046	+		AO353_15005	0.55	+1.0
3,317,046	+		AO353_15005	0.55	+0.1
3,317,047	-		AO353_15005	0.55	-1.1
3,317,164	+		AO353_15005	0.74	-1.5
3,317,165	-		AO353_15005	0.74	+0.8
3,317,165	-		AO353_15005	0.74	+0.6
3,317,165	-		AO353_15005	0.74	+0.5
3,317,165	-		AO353_15005	0.74	-0.2
3,317,362	-				+0.8
3,317,370	+				-0.8
3,317,371	-				+0.4
3,317,371	-				+0.8
3,317,371	-				+1.7
3,317,402	+				-0.0
3,317,402	+				-0.2
3,317,402	+				+0.0
3,317,403	-				+0.4
3,317,403	-				-1.6
3,317,403	-				-0.2
3,317,403	-				+1.8
3,317,403	-				-1.7
3,317,403	-				+2.1
3,317,422	+				-0.3
3,317,422	+				+0.4
3,317,423	-				+0.4
3,317,431	+				+1.5
3,317,431	+				-0.6
3,317,431	+				+1.2
3,317,432	-				+0.4
3,317,432	-				-1.9
3,317,432	-				-0.5
3,317,432	-				+0.8
3,317,432	-				-0.2
3,317,432	-				+1.1
3,317,432	-				+2.1
3,317,432	-				+0.3
3,317,461	+				-0.6
3,317,462	-				+0.6
3,317,462	-				+1.3
3,317,473	+				+1.4
3,317,473	+				-0.1
3,317,473	+				-0.3
3,317,473	+				-0.5
3,317,473	+				-0.2
3,317,473	+				+0.4
3,317,473	+				+1.7
3,317,473	+				-0.6
3,317,473	+				+0.8
3,317,473	+				-0.5
3,317,473	+				+0.5
3,317,473	+				+0.9
3,317,473	+				-1.8
3,317,473	+				-0.4
3,317,473	+				+0.2
3,317,473	+				-0.4
3,317,473	+				-0.1
3,317,473	+				-0.5
3,317,473	+				+0.4
3,317,474	-				+0.9
3,317,474	-				+0.9
3,317,474	-				-1.1
3,317,474	-				-0.1
3,317,474	-				+0.5
3,317,474	-				-0.2
3,317,474	-				+1.1
3,317,474	-				+0.1
3,317,474	-				+1.5
3,317,474	-				+2.1
3,317,474	-				+1.6
3,317,474	-				+1.0
3,317,474	-				-0.4
3,317,474	-				-0.2
3,317,474	-				+0.6
3,317,474	-				+1.4
3,317,474	-				-1.4
3,317,474	-				-0.9
3,317,474	-				-0.5
3,317,474	-				-0.7
3,317,474	-				-0.3
3,317,474	-				+0.4
3,317,492	-				+0.3
3,317,513	+				+2.5
3,317,513	+				+0.7
3,317,513	+				+0.1
3,317,513	+				+0.5
3,317,514	-				-0.2
3,317,604	-				-0.2
3,317,798	+		AO353_15010	0.19	+1.4
3,317,798	+		AO353_15010	0.19	-0.4
3,317,798	+		AO353_15010	0.19	+0.5
3,317,798	+		AO353_15010	0.19	-0.5
3,317,798	+		AO353_15010	0.19	+2.0
3,317,799	-		AO353_15010	0.19	-1.2
3,317,799	-		AO353_15010	0.19	-1.5
3,317,957	+		AO353_15010	0.29	+1.7
3,317,957	+		AO353_15010	0.29	+0.5
3,317,957	+		AO353_15010	0.29	+0.7
3,317,958	-		AO353_15010	0.29	-1.0
3,317,958	-		AO353_15010	0.29	-0.5
3,317,958	-		AO353_15010	0.29	+2.1
3,317,990	+		AO353_15010	0.31	+1.3
3,317,990	+		AO353_15010	0.31	-1.4
3,317,990	+		AO353_15010	0.31	-1.0
3,317,991	-		AO353_15010	0.31	-0.2
3,317,991	-				+0.1
3,318,035	+		AO353_15010	0.33	+0.5
3,318,035	+		AO353_15010	0.33	-0.8
3,318,035	+		AO353_15010	0.33	-0.4
3,318,035	+		AO353_15010	0.33	-0.9
3,318,035	+		AO353_15010	0.33	-1.4
3,318,036	-		AO353_15010	0.33	+0.9
3,318,036	-		AO353_15010	0.33	+0.9
3,318,036	-				+1.5
3,318,036	-		AO353_15010	0.33	+0.9
3,318,036	-		AO353_15010	0.33	-2.4
3,318,036	-		AO353_15010	0.33	+1.2
3,318,036	-		AO353_15010	0.33	-1.8
3,318,036	-		AO353_15010	0.33	+0.4
3,318,036	-		AO353_15010	0.33	-1.6
3,318,036	-		AO353_15010	0.33	-0.6
3,318,036	-		AO353_15010	0.33	+0.4
3,318,036	-		AO353_15010	0.33	-0.9
3,318,072	-		AO353_15010	0.36	+1.7
3,318,072	-		AO353_15010	0.36	+0.2
3,318,072	-		AO353_15010	0.36	-0.2
3,318,072	-		AO353_15010	0.36	+1.2
3,318,072	-		AO353_15010	0.36	+0.5
3,318,167	+		AO353_15010	0.41	+1.0
3,318,167	+		AO353_15010	0.41	-0.6
3,318,167	+		AO353_15010	0.41	-0.5
3,318,167	+		AO353_15010	0.41	+0.6
3,318,167	+		AO353_15010	0.41	+0.8
3,318,167	+		AO353_15010	0.41	+0.6
3,318,167	+		AO353_15010	0.41	-0.6
3,318,167	+		AO353_15010	0.41	-0.0
3,318,167	+		AO353_15010	0.41	+0.2
3,318,167	+		AO353_15010	0.41	-0.5
3,318,168	-		AO353_15010	0.41	-2.4
3,318,168	-		AO353_15010	0.41	-1.1
3,318,168	-		AO353_15010	0.41	-0.9
3,318,168	-		AO353_15010	0.41	+0.3
3,318,168	-		AO353_15010	0.41	+0.6
3,318,168	-		AO353_15010	0.41	-1.5
3,318,168	-		AO353_15010	0.41	+0.0
3,318,168	-		AO353_15010	0.41	-0.1
3,318,215	+		AO353_15010	0.44	+1.1
3,318,215	+		AO353_15010	0.44	-0.2
3,318,216	-		AO353_15010	0.44	-0.5
3,318,216	-		AO353_15010	0.44	+0.1
3,318,272	+		AO353_15010	0.47	-0.1
3,318,272	+		AO353_15010	0.47	+1.4
3,318,273	-		AO353_15010	0.47	+0.8
3,318,273	-		AO353_15010	0.47	-0.5