Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14815

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,278,314	+				+1.0
3,278,314	+				-1.2
3,278,314	+				+1.0
3,278,314	+				-1.1
3,278,314	+				+0.1
3,278,314	+				-0.2
3,278,314	+				+0.5
3,278,314	+				-1.1
3,278,315	-				+0.5
3,278,315	-				-0.2
3,278,315	-				-0.6
3,278,315	-				-1.3
3,278,315	-				-1.5
3,278,315	-				-0.9
3,278,325	+				-0.8
3,278,325	+				+0.6
3,278,326	-				+2.1
3,278,326	-				+1.7
3,278,346	+				+1.1
3,278,346	+				-1.0
3,278,346	+				-0.4
3,278,346	+				+0.0
3,278,346	+				-0.0
3,278,346	+				+0.4
3,278,346	+				-0.2
3,278,346	+				+0.3
3,278,346	+				-0.0
3,278,346	+				-0.8
3,278,346	+				-0.5
3,278,346	+				-0.2
3,278,346	+				-1.2
3,278,346	+				+0.8
3,278,346	+				-1.8
3,278,347	-				+0.4
3,278,347	-				+0.5
3,278,347	-				+0.1
3,278,347	-				-0.2
3,278,347	-				+0.5
3,278,347	-				-0.2
3,278,347	-				-2.4
3,278,490	-		AO353_14805	0.23	+1.4
3,278,518	+		AO353_14805	0.28	-0.5
3,278,519	-		AO353_14805	0.28	-0.7
3,278,519	-		AO353_14805	0.28	-0.1
3,278,519	-		AO353_14805	0.28	+1.6
3,278,573	+		AO353_14805	0.39	-0.6
3,278,573	+		AO353_14805	0.39	-1.8
3,278,573	+		AO353_14805	0.39	+0.9
3,278,573	+		AO353_14805	0.39	-0.8
3,278,573	+				+0.5
3,278,573	+		AO353_14805	0.39	-2.3
3,278,573	+		AO353_14805	0.39	+0.2
3,278,573	+		AO353_14805	0.39	+1.1
3,278,573	+		AO353_14805	0.39	-0.7
3,278,573	+		AO353_14805	0.39	+0.9
3,278,573	+		AO353_14805	0.39	+0.0
3,278,573	+		AO353_14805	0.39	-0.1
3,278,574	-		AO353_14805	0.39	+1.0
3,278,574	-		AO353_14805	0.39	-2.4
3,278,574	-		AO353_14805	0.39	+1.1
3,278,574	-		AO353_14805	0.39	-0.7
3,278,574	-		AO353_14805	0.39	-0.5
3,278,574	-		AO353_14805	0.39	+0.5
3,278,574	-		AO353_14805	0.39	-1.7
3,278,579	+		AO353_14805	0.40	-1.6
3,278,579	+		AO353_14805	0.40	+0.4
3,278,579	+		AO353_14805	0.40	+0.6
3,278,580	-		AO353_14805	0.40	+0.5
3,278,580	-		AO353_14805	0.40	+0.1
3,278,580	-		AO353_14805	0.40	+0.3
3,278,601	+		AO353_14805	0.44	-1.0
3,278,601	+		AO353_14805	0.44	-0.9
3,278,601	+		AO353_14805	0.44	-0.2
3,278,601	+		AO353_14805	0.44	-0.7
3,278,601	+		AO353_14805	0.44	+1.1
3,278,601	+		AO353_14805	0.44	-0.9
3,278,601	+		AO353_14805	0.44	-0.5
3,278,602	-		AO353_14805	0.44	+1.1
3,278,602	-		AO353_14805	0.44	-1.8
3,278,602	-		AO353_14805	0.44	+0.4
3,278,602	-		AO353_14805	0.44	+0.0
3,278,602	-		AO353_14805	0.44	+0.8
3,278,602	-		AO353_14805	0.44	-1.1
3,278,602	-		AO353_14805	0.44	-0.5
3,278,640	-		AO353_14805	0.52	+0.1
3,278,669	+		AO353_14805	0.57	-1.0
3,278,669	+		AO353_14805	0.57	-0.9
3,278,669	+		AO353_14805	0.57	+0.5
3,278,670	-		AO353_14805	0.57	-1.4
3,278,670	-		AO353_14805	0.57	-0.6
3,278,670	-		AO353_14805	0.57	-0.4
3,278,816	+		AO353_14805	0.86	+0.2
3,278,816	+		AO353_14805	0.86	-0.2
3,278,816	+		AO353_14805	0.86	-2.4
3,278,817	-		AO353_14805	0.86	-0.5
3,278,817	-		AO353_14805	0.86	+1.1
3,278,852	-				-0.9
3,278,852	-				+2.1
3,278,853	+				+0.3
3,278,853	+				+0.7
3,278,853	+				+0.3
3,278,853	+				-0.2
3,278,853	+				+0.4
3,278,853	+				-0.7
3,278,854	-				-0.9
3,278,854	-				-1.0
3,278,854	-				-1.6
3,278,854	-				+0.9
3,278,854	-				+0.7
3,278,854	-				+0.4
3,278,861	+				-1.3
3,278,862	-				-0.2
3,278,862	-				+0.3
3,278,862	-				-2.1
3,278,873	+				-1.5
3,278,873	+				-1.5
3,278,873	+				+0.6
3,278,873	+				+0.4
3,278,873	+				+0.3
3,278,873	+				-0.1
3,278,874	-				-0.1
3,278,874	-				-1.1
3,278,874	-				+0.4
3,278,874	-				-1.0
3,278,874	-				+0.4
3,278,888	+				+0.1
3,278,888	+				+0.3
3,278,888	+				+0.5
3,278,888	+				+0.6
3,278,888	+				-1.0
3,278,888	+				-0.1
3,278,888	+				-0.5
3,278,889	-				+0.4
3,278,889	-				-1.3
3,278,889	-				+0.4
3,278,910	+				-0.1
3,278,949	+				-0.6
3,278,949	+				+0.1
3,278,949	+				-0.2
3,278,949	+				-0.2
3,279,247	+				+1.9
3,279,247	+				-0.6
3,279,247	+				-0.6
3,279,247	+				-0.7
3,279,247	+				+0.4
3,279,247	+				+0.2
3,279,247	+				-1.5
3,279,247	+				+0.4
3,279,247	+				-0.4
3,279,248	-				+0.5
3,279,248	-				+0.0
3,279,248	-				-1.8
3,279,248	-				-0.0
3,279,248	-				-0.2
3,279,248	-				+0.1
3,279,248	-				+0.3
3,279,260	+				+0.7
3,279,260	+				-0.7
3,279,260	+				+0.3
3,279,260	+				-1.3
3,279,261	-				-1.1
3,279,261	-				-0.6
3,279,261	-				-1.8
3,279,275	+				-0.7
3,279,275	+				+2.1
3,279,275	+				+0.8
3,279,276	-				+0.2
3,279,398	+		AO353_14815	0.12	+1.5
3,279,398	+		AO353_14815	0.12	+0.1
3,279,399	-		AO353_14815	0.12	+1.0
3,279,399	-		AO353_14815	0.12	-1.0
3,279,399	-		AO353_14815	0.12	-0.2
3,279,399	-		AO353_14815	0.12	-1.3
3,279,399	-		AO353_14815	0.12	-0.9
3,279,543	+		AO353_14815	0.29	+0.4
3,279,673	-		AO353_14815	0.45	+0.4
3,279,673	-		AO353_14815	0.45	-0.0
3,279,673	-		AO353_14815	0.45	-1.2
3,279,673	-		AO353_14815	0.45	+0.4
3,279,777	+		AO353_14815	0.58	-1.3
3,279,777	+		AO353_14815	0.58	+1.1
3,279,777	+		AO353_14815	0.58	+0.9
3,279,778	-		AO353_14815	0.58	-0.5
3,279,778	-		AO353_14815	0.58	+1.3
3,279,778	-		AO353_14815	0.58	-0.7
3,279,849	+		AO353_14815	0.66	-0.7
3,279,849	+		AO353_14815	0.66	-1.6
3,279,849	+		AO353_14815	0.66	+0.7
3,279,849	+		AO353_14815	0.66	-0.4
3,279,849	+		AO353_14815	0.66	+2.5
3,279,849	+		AO353_14815	0.66	+0.2
3,279,849	+		AO353_14815	0.66	+0.8
3,279,849	+		AO353_14815	0.66	+2.3
3,279,850	-		AO353_14815	0.66	+1.6
3,279,850	-		AO353_14815	0.66	+0.2
3,279,850	-		AO353_14815	0.66	+0.0
3,279,850	-		AO353_14815	0.66	+1.4
3,279,850	-		AO353_14815	0.66	+1.9
3,279,871	+		AO353_14815	0.69	+0.1
3,279,871	+		AO353_14815	0.69	-0.5
3,279,872	-		AO353_14815	0.69	-1.5
3,279,872	-		AO353_14815	0.69	+1.5
3,279,872	-		AO353_14815	0.69	+0.4
3,280,101	+				-0.3
3,280,102	-				+0.9
3,280,117	+				+1.7
3,280,117	+				-0.1
3,280,117	+				+1.5
3,280,117	+				+0.5
3,280,117	+				+0.5
3,280,117	+				-0.2
3,280,117	+				-0.2
3,280,117	+				+0.2
3,280,117	+				-0.3
3,280,118	-				+0.3
3,280,118	-				+0.9
3,280,118	-				+0.5
3,280,118	-				+0.7
3,280,118	-				+1.3
3,280,118	-				-0.9
3,280,118	-				+0.7
3,280,118	-				+0.2
3,280,118	-				+4.3
3,280,118	-				+0.5
3,280,118	-				-0.1
3,280,118	-				-1.2
3,280,118	-				-0.3
3,280,118	-				+1.5
3,280,732	+		AO353_14820	0.40	-2.1
3,280,732	+		AO353_14820	0.40	+1.1
3,280,733	-		AO353_14820	0.40	+0.5
3,280,733	-		AO353_14820	0.40	-1.2
3,280,861	+		AO353_14820	0.49	-1.0
3,280,915	+		AO353_14820	0.53	-2.1
3,280,915	+		AO353_14820	0.53	+0.4
3,280,915	+		AO353_14820	0.53	-2.5
3,280,916	-		AO353_14820	0.53	-1.0
3,280,916	-		AO353_14820	0.53	-0.3
3,280,916	-		AO353_14820	0.53	-0.7
3,281,116	+		AO353_14820	0.67	-0.0
3,281,116	+		AO353_14820	0.67	+1.4
3,281,117	-		AO353_14820	0.67	-0.9
3,281,117	-		AO353_14820	0.67	-0.5
3,281,117	-		AO353_14820	0.67	-0.7
3,281,117	-		AO353_14820	0.67	-0.5
3,281,117	-		AO353_14820	0.67	+1.3