Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14620

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,240,341	+		AO353_14615	0.45	-0.8
3,240,342	-		AO353_14615	0.45	+0.2
3,240,342	-		AO353_14615	0.45	+0.8
3,240,369	+		AO353_14615	0.47	-0.0
3,240,370	-		AO353_14615	0.47	-2.4
3,240,370	-		AO353_14615	0.47	-0.9
3,240,370	-		AO353_14615	0.47	-0.2
3,240,370	-		AO353_14615	0.47	+0.3
3,240,370	-		AO353_14615	0.47	+1.1
3,240,483	+		AO353_14615	0.55	-0.0
3,240,484	-		AO353_14615	0.55	-1.3
3,240,672	+		AO353_14615	0.68	-1.2
3,240,673	-		AO353_14615	0.68	-1.0
3,240,673	-		AO353_14615	0.68	+0.3
3,240,673	-		AO353_14615	0.68	-1.0
3,240,697	-		AO353_14615	0.70	-0.1
3,240,703	+		AO353_14615	0.70	-0.3
3,240,863	+		AO353_14615	0.81	-0.9
3,240,892	-		AO353_14615	0.83	-0.2
3,240,892	-		AO353_14615	0.83	+0.7
3,240,892	-		AO353_14615	0.83	-0.1
3,240,892	-		AO353_14615	0.83	+1.0
3,241,132	+				+0.0
3,241,132	+				+0.1
3,241,132	+				-1.2
3,241,132	+				+3.4
3,241,132	+				+1.1
3,241,132	+				-2.5
3,241,133	-				+0.7
3,241,133	-				+1.0
3,241,133	-				+2.9
3,241,133	-				-0.2
3,241,138	+				+0.8
3,241,138	+				-0.9
3,241,139	-				+0.2
3,241,139	-				+1.2
3,241,144	+				+0.3
3,241,144	+				-2.0
3,241,144	+				+0.2
3,241,145	-				-0.4
3,241,150	+				-0.7
3,241,150	+				-1.0
3,241,150	+				+1.3
3,241,150	+				+0.0
3,241,150	+				+0.0
3,241,150	+				+2.1
3,241,150	+				+1.8
3,241,151	-				+0.1
3,241,151	-				+0.1
3,241,151	-				-0.2
3,241,151	-				+0.8
3,241,194	+				-0.6
3,241,194	+				+2.1
3,241,194	+				+0.3
3,241,194	+				+1.8
3,241,194	+				-0.7
3,241,195	-				-1.7
3,241,195	-				-0.1
3,241,195	-				+0.6
3,241,195	-				-0.1
3,241,195	-				-0.7
3,241,195	-				-0.7
3,241,195	-				-1.3
3,241,195	-				+0.1
3,241,195	-				-1.4
3,241,201	+				-0.5
3,241,201	+				+1.6
3,241,201	+				+0.6
3,241,201	+				-1.7
3,241,202	-				+0.3
3,241,202	-				-0.6
3,241,202	-				+0.2
3,241,248	+				-2.4
3,241,248	+				+1.0
3,241,248	+				+0.2
3,241,248	+				-0.1
3,241,248	+				-1.6
3,241,249	-				-0.0
3,241,249	-				+0.7
3,241,255	+				+0.8
3,241,283	+				-0.3
3,241,329	+				+0.3
3,241,378	+				+0.4
3,241,378	+				-0.7
3,241,378	+				-0.4
3,241,378	+				+2.3
3,241,378	+				-0.7
3,241,424	-				-0.4
3,241,442	+				-1.4
3,241,666	+		AO353_14620	0.26	-0.2
3,241,667	-		AO353_14620	0.26	-1.7
3,241,667	-		AO353_14620	0.26	+0.6
3,241,667	-		AO353_14620	0.26	-1.4
3,241,681	+		AO353_14620	0.27	+0.7
3,241,718	+		AO353_14620	0.29	-1.1
3,241,718	+		AO353_14620	0.29	+0.5
3,241,718	+		AO353_14620	0.29	-0.7
3,241,719	-		AO353_14620	0.30	-1.2
3,241,719	-		AO353_14620	0.30	+0.1
3,241,799	-		AO353_14620	0.36	+1.6
3,241,799	-		AO353_14620	0.36	+1.0
3,241,879	+		AO353_14620	0.42	-0.3
3,241,880	-		AO353_14620	0.42	+0.2
3,241,880	-		AO353_14620	0.42	-0.0
3,241,880	-		AO353_14620	0.42	-0.4
3,241,904	-		AO353_14620	0.44	-0.8
3,241,928	+		AO353_14620	0.45	+0.4
3,241,928	+		AO353_14620	0.45	+0.1
3,242,128	-		AO353_14620	0.61	-0.0
3,242,175	+		AO353_14620	0.64	-2.3
3,242,175	+		AO353_14620	0.64	+0.1
3,242,175	+		AO353_14620	0.64	+0.0
3,242,175	+		AO353_14620	0.64	-1.4
3,242,175	+		AO353_14620	0.64	+0.8
3,242,175	+		AO353_14620	0.64	-0.0
3,242,176	-		AO353_14620	0.64	+0.4
3,242,176	-		AO353_14620	0.64	+1.2
3,242,278	+		AO353_14620	0.72	-1.6
3,242,278	+		AO353_14620	0.72	-1.0
3,242,278	+		AO353_14620	0.72	+1.9
3,242,278	+		AO353_14620	0.72	-1.6
3,242,278	+		AO353_14620	0.72	-0.7
3,242,278	+		AO353_14620	0.72	+1.1
3,242,278	+		AO353_14620	0.72	-0.3
3,242,278	+				+0.1
3,242,279	-		AO353_14620	0.72	+1.0
3,242,279	-		AO353_14620	0.72	-0.2
3,242,279	-		AO353_14620	0.72	+0.9
3,242,279	-		AO353_14620	0.72	-1.8
3,242,279	-		AO353_14620	0.72	+1.1
3,242,279	-		AO353_14620	0.72	-0.3
3,242,279	-		AO353_14620	0.72	-0.4
3,242,279	-		AO353_14620	0.72	+1.6
3,242,280	+		AO353_14620	0.72	+1.1
3,242,280	+		AO353_14620	0.72	-0.8
3,242,314	+		AO353_14620	0.75	+1.6
3,242,315	-		AO353_14620	0.75	+1.5
3,242,356	+		AO353_14620	0.78	-0.3
3,242,356	+		AO353_14620	0.78	+0.8
3,242,357	-		AO353_14620	0.78	-0.1
3,242,357	-		AO353_14620	0.78	-2.8
3,242,357	-		AO353_14620	0.78	+0.9
3,242,445	+		AO353_14620	0.85	+1.7
3,242,454	+		AO353_14620	0.85	+0.6
3,242,454	+		AO353_14620	0.85	+0.9
3,242,454	+		AO353_14620	0.85	+0.5
3,242,454	+		AO353_14620	0.85	+1.0
3,242,455	-		AO353_14620	0.85	+1.8
3,242,455	-		AO353_14620	0.85	-0.3
3,242,455	-		AO353_14620	0.85	+0.2
3,242,455	-		AO353_14620	0.85	+0.3
3,242,458	+		AO353_14620	0.86	-0.3
3,242,458	+		AO353_14620	0.86	+1.1
3,242,458	+		AO353_14620	0.86	+0.6
3,242,458	+		AO353_14620	0.86	+1.7
3,242,458	+		AO353_14620	0.86	+1.4
3,242,459	-		AO353_14620	0.86	+1.2
3,242,459	-		AO353_14620	0.86	+1.1
3,242,487	+		AO353_14620	0.88	+0.6
3,242,587	+				+0.0
3,242,587	+				-1.0
3,242,588	-				+2.4
3,242,588	-				+1.4
3,242,660	+				-0.1
3,242,661	-				+0.2
3,242,661	-				+2.7
3,242,747	+		AO353_14625	0.18	-0.4
3,242,747	+		AO353_14625	0.18	+0.6
3,242,748	-		AO353_14625	0.18	-0.1
3,242,748	-		AO353_14625	0.18	+1.6
3,242,864	+		AO353_14625	0.41	-1.2
3,242,864	+		AO353_14625	0.41	-1.7
3,242,864	+		AO353_14625	0.41	-0.6
3,242,864	+		AO353_14625	0.41	+0.6
3,242,864	+		AO353_14625	0.41	-0.2
3,242,864	+		AO353_14625	0.41	+1.1
3,242,864	+		AO353_14625	0.41	-1.6
3,242,864	+		AO353_14625	0.41	+0.3
3,242,865	-		AO353_14625	0.41	-2.0
3,242,865	-		AO353_14625	0.41	-1.3
3,242,865	-		AO353_14625	0.41	-2.2
3,242,865	-		AO353_14625	0.41	-2.0
3,242,865	-		AO353_14625	0.41	-1.1
3,242,865	-		AO353_14625	0.41	+0.3
3,242,872	-		AO353_14625	0.42	+0.4
3,242,892	+		AO353_14625	0.46	-1.0
3,242,892	+		AO353_14625	0.46	-0.4
3,242,892	+		AO353_14625	0.46	+1.4
3,242,893	-		AO353_14625	0.47	-0.4
3,242,893	-		AO353_14625	0.47	+1.1
3,242,911	+		AO353_14625	0.50	+0.1
3,242,960	+		AO353_14625	0.59	-0.5
3,243,015	+		AO353_14625	0.70	+1.1
3,243,015	+		AO353_14625	0.70	-0.4
3,243,015	+		AO353_14625	0.70	+1.7
3,243,016	-		AO353_14625	0.70	-0.2
3,243,016	-		AO353_14625	0.70	-1.2
3,243,047	+		AO353_14625	0.76	-1.4
3,243,047	+		AO353_14625	0.76	-0.0
3,243,047	+		AO353_14625	0.76	-1.1
3,243,047	+		AO353_14625	0.76	-0.7
3,243,047	+		AO353_14625	0.76	+1.2
3,243,047	+		AO353_14625	0.76	-1.7
3,243,048	-		AO353_14625	0.77	-1.9
3,243,048	-		AO353_14625	0.77	-1.1
3,243,048	-		AO353_14625	0.77	+0.5
3,243,048	-		AO353_14625	0.77	+1.1
3,243,048	-		AO353_14625	0.77	+0.3
3,243,080	+		AO353_14625	0.83	-1.4
3,243,080	+		AO353_14625	0.83	+1.4
3,243,080	+		AO353_14625	0.83	+0.6
3,243,080	+		AO353_14625	0.83	-0.7
3,243,080	+		AO353_14625	0.83	+0.1
3,243,080	+		AO353_14625	0.83	+0.6
3,243,080	+		AO353_14625	0.83	+0.1
3,243,080	+		AO353_14625	0.83	-0.2
3,243,080	+		AO353_14625	0.83	-1.3
3,243,081	-		AO353_14625	0.83	-0.4
3,243,081	-		AO353_14625	0.83	-0.4
3,243,081	-		AO353_14625	0.83	-0.7
3,243,081	-		AO353_14625	0.83	-0.7
3,243,081	-		AO353_14625	0.83	-1.3
3,243,081	-		AO353_14625	0.83	+1.0
3,243,081	-		AO353_14625	0.83	-1.3
3,243,081	-		AO353_14625	0.83	-0.7
3,243,081	-		AO353_14625	0.83	-0.3
3,243,145	+				+0.7
3,243,145	+				-0.7
3,243,146	-				-0.4
3,243,146	-				-0.7
3,243,184	+				-0.7
3,243,184	+				+0.1
3,243,184	+				+1.3
3,243,185	-				+0.9
3,243,185	-				+0.6
3,243,185	-				+0.8
3,243,185	-				-1.0
3,243,209	+				+0.9
3,243,209	+				+0.1
3,243,209	+				+1.0
3,243,209	+				-1.4
3,243,209	+				+0.8
3,243,209	+				+1.2
3,243,209	+				-0.9
3,243,209	+				+0.7
3,243,209	+				-0.7
3,243,209	+				-0.0
3,243,209	+				-1.5
3,243,209	+				+1.4
3,243,210	-				+0.4
3,243,210	-				-1.0
3,243,210	-				-0.7
3,243,210	-				-0.8
3,243,210	-				-0.4
3,243,210	-				+0.0
3,243,210	-				-0.4
3,243,211	+				+0.5
3,243,211	+				-0.5
3,243,211	+				-1.6
3,243,211	+				-0.5
3,243,211	+				+0.9
3,243,212	-				+0.1
3,243,212	-				+1.8
3,243,212	-				-0.5
3,243,212	-				+1.5
3,243,212	-				+0.6
3,243,263	+				+1.1
3,243,264	-				+1.4
3,243,264	-				+0.7
3,243,281	+				-0.7
3,243,282	-				+0.1
3,243,290	-				-0.2
3,243,337	+				-0.7
3,243,337	+				-0.1
3,243,337	+				-0.9
3,243,338	-				-0.2
3,243,338	-				+1.6
3,243,338	-				-0.6
3,243,389	+				-0.5
3,243,389	+				-1.3
3,243,390	-				-0.3
3,243,543	+		AO353_14630	0.12	-1.5
3,243,543	+		AO353_14630	0.12	-0.2
3,243,543	+		AO353_14630	0.12	-0.2
3,243,543	+		AO353_14630	0.12	-0.5
3,243,543	+		AO353_14630	0.12	-0.6
3,243,543	+		AO353_14630	0.12	+0.6
3,243,544	-		AO353_14630	0.12	-1.0
3,243,544	-		AO353_14630	0.12	+0.4
3,243,544	-		AO353_14630	0.12	-1.1