Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14065

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,126,767	+				-1.9
3,126,767	+				+0.6
3,126,767	+				+0.8
3,126,767	+				+1.4
3,126,767	+				+1.2
3,126,767	+				+1.5
3,126,767	+				-0.0
3,126,768	-				-1.6
3,126,768	-				+0.2
3,126,768	-				-0.5
3,126,768	-				+2.0
3,126,768	-				-0.0
3,126,768	-				-0.4
3,126,768	-				+0.3
3,126,960	+				-0.2
3,126,961	-				-2.1
3,126,961	-				+0.8
3,126,998	+				-2.7
3,126,998	+				+0.9
3,126,998	+				-1.3
3,126,999	-				-0.2
3,126,999	-				+0.1
3,126,999	-				+0.4
3,126,999	-				-0.4
3,127,053	+				+1.1
3,127,054	-				+0.4
3,127,072	+				+2.0
3,127,072	+				-1.0
3,127,131	+				+1.8
3,127,132	-				-1.2
3,127,132	-				-0.9
3,127,166	+				+0.5
3,127,166	+				+0.8
3,127,166	+				+1.1
3,127,166	+				+0.6
3,127,166	+				-0.1
3,127,166	+				-1.4
3,127,166	+				+2.3
3,127,166	+				+0.7
3,127,166	+				+0.6
3,127,166	+				-1.1
3,127,166	+				-0.6
3,127,167	-				-0.2
3,127,167	-				+1.8
3,127,167	-				-0.8
3,127,167	-				+1.0
3,127,167	-				-0.2
3,127,167	-				-1.2
3,127,241	-				-0.6
3,127,319	+		AO353_14060	0.18	-0.2
3,127,319	+		AO353_14060	0.18	+0.8
3,127,319	+		AO353_14060	0.18	-1.0
3,127,319	+		AO353_14060	0.18	-0.3
3,127,320	-		AO353_14060	0.18	+0.6
3,127,320	-		AO353_14060	0.18	-0.0
3,127,347	-		AO353_14060	0.26	+0.8
3,127,445	-		AO353_14060	0.55	-1.0
3,127,596	+				-0.3
3,127,596	+				+1.0
3,127,597	-				+2.0
3,127,597	-				+1.0
3,127,603	+				+0.5
3,127,603	+				+0.9
3,127,604	-				+0.5
3,127,604	-				+4.7
3,127,655	-				-1.5
3,127,684	+				-0.3
3,127,684	+				+1.5
3,127,685	-				-0.2
3,127,685	-				+0.6
3,127,711	+				-1.0
3,127,712	-				+0.4
3,127,717	+				-0.7
3,127,717	+				+0.2
3,127,717	+				-2.1
3,127,717	+				+0.8
3,127,717	+				+0.8
3,127,717	+				-0.8
3,127,717	+				-0.2
3,127,717	+				-0.0
3,127,718	-				-0.5
3,127,718	-				-1.9
3,127,718	-				+0.6
3,127,718	-				+0.9
3,127,718	-				+0.4
3,127,786	+		AO353_14065	0.10	-0.5
3,127,837	-		AO353_14065	0.13	-0.3
3,127,837	-		AO353_14065	0.13	-0.6
3,127,837	-		AO353_14065	0.13	-0.6
3,127,837	-		AO353_14065	0.13	-1.7
3,127,919	+		AO353_14065	0.17	-0.8
3,127,954	+		AO353_14065	0.19	-0.6
3,127,955	-		AO353_14065	0.19	-0.1
3,127,955	-		AO353_14065	0.19	-0.8
3,127,955	-		AO353_14065	0.19	-0.7
3,127,955	-		AO353_14065	0.19	+0.6
3,127,955	-		AO353_14065	0.19	+0.6
3,127,955	-		AO353_14065	0.19	+0.9
3,127,987	+		AO353_14065	0.21	-0.2
3,127,987	+		AO353_14065	0.21	+0.2
3,127,987	+		AO353_14065	0.21	-1.0
3,127,987	+		AO353_14065	0.21	+0.8
3,127,987	+		AO353_14065	0.21	+0.2
3,127,987	+		AO353_14065	0.21	-1.2
3,127,987	+		AO353_14065	0.21	-0.6
3,127,987	+		AO353_14065	0.21	+0.6
3,127,987	+		AO353_14065	0.21	-0.8
3,127,987	+		AO353_14065	0.21	-2.9
3,127,988	-		AO353_14065	0.21	-1.3
3,127,988	-		AO353_14065	0.21	-0.6
3,127,988	-		AO353_14065	0.21	-1.9
3,127,988	-		AO353_14065	0.21	-1.3
3,127,988	-		AO353_14065	0.21	+0.4
3,127,988	-		AO353_14065	0.21	-0.5
3,128,035	-		AO353_14065	0.24	-0.7
3,128,035	-		AO353_14065	0.24	-1.0
3,128,035	-		AO353_14065	0.24	+0.6
3,128,057	+		AO353_14065	0.25	+0.3
3,128,057	+		AO353_14065	0.25	-0.2
3,128,057	+		AO353_14065	0.25	-1.6
3,128,266	+		AO353_14065	0.36	-1.7
3,128,266	+		AO353_14065	0.36	+1.2
3,128,266	+		AO353_14065	0.36	-1.8
3,128,266	+		AO353_14065	0.36	-0.6
3,128,303	+		AO353_14065	0.38	-1.1
3,128,312	+		AO353_14065	0.39	-1.3
3,128,313	-		AO353_14065	0.39	-1.4
3,128,331	+		AO353_14065	0.40	-0.5
3,128,332	-		AO353_14065	0.40	+0.9
3,128,419	+		AO353_14065	0.45	-0.9
3,128,419	+		AO353_14065	0.45	+0.2
3,128,419	+		AO353_14065	0.45	+1.0
3,128,419	+		AO353_14065	0.45	-1.4
3,128,419	+		AO353_14065	0.45	+1.3
3,128,420	-		AO353_14065	0.45	-1.2
3,128,420	-		AO353_14065	0.45	-0.1
3,128,420	-		AO353_14065	0.45	-0.5
3,128,420	-		AO353_14065	0.45	-0.6
3,128,431	+		AO353_14065	0.45	+0.6
3,128,431	+		AO353_14065	0.45	-1.8
3,128,431	+		AO353_14065	0.45	-2.2
3,128,431	+		AO353_14065	0.45	-0.3
3,128,431	+		AO353_14065	0.45	+1.2
3,128,431	+		AO353_14065	0.45	-1.5
3,128,431	+		AO353_14065	0.45	-1.6
3,128,431	+		AO353_14065	0.45	-1.7
3,128,432	-		AO353_14065	0.45	-0.0
3,128,432	-		AO353_14065	0.45	-2.0
3,128,432	-		AO353_14065	0.45	+0.1
3,128,432	-		AO353_14065	0.45	+1.0
3,128,475	+		AO353_14065	0.48	+1.3
3,128,475	+		AO353_14065	0.48	-0.6
3,128,475	+		AO353_14065	0.48	+1.8
3,128,475	+		AO353_14065	0.48	-1.5
3,128,475	+		AO353_14065	0.48	-0.6
3,128,475	+		AO353_14065	0.48	+0.2
3,128,476	-		AO353_14065	0.48	-2.4
3,128,476	-		AO353_14065	0.48	+0.0
3,128,539	+		AO353_14065	0.51	+0.2
3,128,539	+		AO353_14065	0.51	+2.0
3,128,539	+		AO353_14065	0.51	-2.4
3,128,539	+		AO353_14065	0.51	-0.1
3,128,540	-		AO353_14065	0.51	-1.4
3,128,692	+		AO353_14065	0.60	+0.3
3,128,692	+		AO353_14065	0.60	-0.2
3,128,693	-		AO353_14065	0.60	-0.6
3,128,781	+		AO353_14065	0.64	+1.2
3,128,781	+		AO353_14065	0.64	-1.6
3,128,781	+		AO353_14065	0.64	+0.3
3,128,781	+		AO353_14065	0.64	+0.3
3,128,781	+		AO353_14065	0.64	+1.7
3,128,781	+		AO353_14065	0.64	-0.9
3,128,781	+		AO353_14065	0.64	-2.4
3,128,781	+		AO353_14065	0.64	-0.9
3,128,781	+		AO353_14065	0.64	+0.6
3,128,781	+		AO353_14065	0.64	+0.1
3,128,781	+		AO353_14065	0.64	+0.6
3,128,781	+		AO353_14065	0.64	-0.0
3,128,781	+		AO353_14065	0.64	-1.2
3,128,782	-				+0.6
3,128,782	-		AO353_14065	0.64	-0.3
3,128,782	-		AO353_14065	0.64	-0.0
3,128,810	+		AO353_14065	0.66	+1.0
3,128,810	+		AO353_14065	0.66	+0.6
3,128,810	+		AO353_14065	0.66	-1.3
3,128,810	+		AO353_14065	0.66	-0.2
3,128,810	+		AO353_14065	0.66	+0.4
3,128,810	+		AO353_14065	0.66	-0.8
3,128,811	-		AO353_14065	0.66	+0.7
3,128,875	+		AO353_14065	0.70	+0.8
3,128,876	-		AO353_14065	0.70	+0.7
3,128,988	+		AO353_14065	0.76	+0.2
3,128,989	-		AO353_14065	0.76	-1.3
3,128,989	-		AO353_14065	0.76	+0.5
3,128,989	-		AO353_14065	0.76	-1.4
3,129,083	-		AO353_14065	0.81	-0.9
3,129,083	-		AO353_14065	0.81	-1.6
3,129,108	+		AO353_14065	0.82	-0.7
3,129,108	+		AO353_14065	0.82	-2.5
3,129,108	+		AO353_14065	0.82	-1.6
3,129,109	-		AO353_14065	0.82	+1.2
3,129,109	-		AO353_14065	0.82	+0.9
3,129,127	+		AO353_14065	0.83	+0.6
3,129,127	+		AO353_14065	0.83	+0.2
3,129,127	+		AO353_14065	0.83	+0.2
3,129,127	+		AO353_14065	0.83	-0.5
3,129,128	-		AO353_14065	0.83	-0.1
3,129,128	-		AO353_14065	0.83	-1.6
3,129,128	-		AO353_14065	0.83	+1.7
3,129,128	-		AO353_14065	0.83	+1.6
3,129,128	-		AO353_14065	0.83	-1.0
3,129,128	-		AO353_14065	0.83	+1.7
3,129,128	-		AO353_14065	0.83	+0.2
3,129,128	-		AO353_14065	0.83	+0.6
3,129,128	-		AO353_14065	0.83	+0.3
3,129,128	-		AO353_14065	0.83	-1.7
3,129,448	-				+0.7
3,129,458	+				-1.0
3,129,458	+				-1.6
3,129,483	+				-1.6
3,129,484	-				+1.0
3,129,535	-				-1.0
3,129,556	-				-1.3
3,129,556	-				+1.7
3,129,556	-				+0.1
3,129,557	+				+0.2
3,129,557	+				+1.0
3,129,557	+				-0.7
3,129,557	+				-0.8
3,129,558	-				+0.7
3,129,558	-				+0.5
3,129,558	-				+0.4
3,129,620	+				+0.1
3,129,620	+				+0.7
3,129,620	+				+0.6
3,129,620	+				-0.8
3,129,620	+				+0.3
3,129,620	+				+0.5
3,129,620	+				+0.7
3,129,620	+				+0.6
3,129,620	+				+0.4
3,129,620	+				-0.6
3,129,620	+				+1.5
3,129,620	+				+0.3
3,129,620	+				-0.4
3,129,621	-				+2.2
3,129,621	-				+1.5
3,129,621	-				-0.1
3,129,621	-				-0.8
3,129,621	-				-0.4
3,129,621	-				+0.4
3,129,621	-				+1.0
3,129,621	-				-0.8
3,129,621	-				+1.2
3,129,650	+		AO353_14070	0.12	-1.4
3,129,650	+		AO353_14070	0.12	-2.2
3,129,650	+		AO353_14070	0.12	-1.2
3,129,650	+		AO353_14070	0.12	+1.5
3,129,650	+		AO353_14070	0.12	-1.7
3,129,650	+		AO353_14070	0.12	+1.7
3,129,650	+		AO353_14070	0.12	+0.9
3,129,650	+		AO353_14070	0.12	-0.7
3,129,651	-		AO353_14070	0.12	-1.5
3,129,651	-		AO353_14070	0.12	-1.1
3,129,824	+		AO353_14070	0.47	-1.8
3,130,007	+		AO353_14070	0.85	+0.0
3,130,007	+		AO353_14070	0.85	-1.2
3,130,007	+		AO353_14070	0.85	-1.2
3,130,007	+		AO353_14070	0.85	+0.5
3,130,007	+		AO353_14070	0.85	-0.4
3,130,007	+		AO353_14070	0.85	-1.2
3,130,008	-		AO353_14070	0.85	+1.3
3,130,008	-		AO353_14070	0.85	-0.3
3,130,056	-				+1.0
3,130,143	+				-1.6
3,130,143	+				-1.2
3,130,164	-				-0.4
3,130,164	-				+0.1
3,130,164	-				-1.2
3,130,172	-				-1.1
3,130,172	-				-1.5
3,130,293	+				+0.8
3,130,301	+				+1.3
3,130,301	+				-0.0
3,130,301	+				-0.6
3,130,301	+				+0.2
3,130,301	+				-1.5
3,130,301	+				-0.6
3,130,301	+				-1.3
3,130,302	-				-0.6
3,130,302	-				+0.2
3,130,302	-				-0.6
3,130,302	-				-1.9
3,130,302	-				-0.8
3,130,361	+				-0.8
3,130,361	+				-1.1
3,130,361	+				-0.5
3,130,361	+				-0.9
3,130,361	+				+0.8
3,130,362	-				+0.7
3,130,362	-				-0.1
3,130,418	+		AO353_14075	0.28	+0.8
3,130,418	+		AO353_14075	0.28	+1.3
3,130,418	+		AO353_14075	0.28	+1.8
3,130,418	+		AO353_14075	0.28	-0.6
3,130,418	+		AO353_14075	0.28	-0.4
3,130,418	+		AO353_14075	0.28	+1.2
3,130,418	+		AO353_14075	0.28	-0.4
3,130,418	+		AO353_14075	0.28	+0.6
3,130,418	+		AO353_14075	0.28	+0.0
3,130,418	+		AO353_14075	0.28	-0.2
3,130,418	+		AO353_14075	0.28	-0.5
3,130,419	-		AO353_14075	0.28	+0.4
3,130,419	-		AO353_14075	0.28	+1.2
3,130,419	-		AO353_14075	0.28	+0.9
3,130,419	-		AO353_14075	0.28	-2.0
3,130,419	-		AO353_14075	0.28	+1.7
3,130,419	-		AO353_14075	0.28	+1.2
3,130,419	-		AO353_14075	0.28	+0.2
3,130,419	-		AO353_14075	0.28	+0.1
3,130,419	-		AO353_14075	0.28	-0.8
3,130,419	-		AO353_14075	0.28	+0.9
3,130,419	-		AO353_14075	0.28	+1.5
3,130,419	-		AO353_14075	0.28	+0.3
3,130,419	-		AO353_14075	0.28	-0.2
3,130,419	-		AO353_14075	0.28	-2.0
3,130,419	-		AO353_14075	0.28	-1.4
3,130,425	+		AO353_14075	0.30	-1.0