Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13925

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
3,092,695	-		AO353_13915	0.33	-0.7
3,092,695	-		AO353_13915	0.33	+1.0
3,092,695	-		AO353_13915	0.33	+0.5
3,092,695	-		AO353_13915	0.33	+0.2
3,092,695	-		AO353_13915	0.33	-2.5
3,092,752	+		AO353_13915	0.45	+0.1
3,092,752	+		AO353_13915	0.45	+1.2
3,092,752	+		AO353_13915	0.45	-1.2
3,092,752	+		AO353_13915	0.45	+0.7
3,092,753	-		AO353_13915	0.45	+1.2
3,092,753	-		AO353_13915	0.45	+0.2
3,092,840	-		AO353_13915	0.64	-1.5
3,092,840	-		AO353_13915	0.64	-0.2
3,092,840	-		AO353_13915	0.64	+0.0
3,092,899	+		AO353_13915	0.77	-1.4
3,092,899	+		AO353_13915	0.77	-1.1
3,092,899	+		AO353_13915	0.77	-2.4
3,092,900	-		AO353_13915	0.77	-1.5
3,092,900	-		AO353_13915	0.77	+0.2
3,092,900	-		AO353_13915	0.77	-1.0
3,092,949	+		AO353_13915	0.88	-0.4
3,092,949	+		AO353_13915	0.88	+0.2
3,092,949	+		AO353_13915	0.88	-0.2
3,092,949	+		AO353_13915	0.88	+0.8
3,092,949	+		AO353_13915	0.88	+0.7
3,092,950	-		AO353_13915	0.88	-0.4
3,092,950	-		AO353_13915	0.88	+1.6
3,092,950	-		AO353_13915	0.88	-0.7
3,092,973	+				-2.8
3,092,974	-				-1.6
3,092,992	+				+1.0
3,092,992	+				-0.8
3,092,992	+				+0.2
3,092,992	+				+0.3
3,092,992	+				-0.8
3,092,992	+				+0.7
3,092,992	+				-0.1
3,092,992	+				+0.4
3,092,992	+				+0.5
3,092,992	+				-0.7
3,092,992	+				+1.2
3,092,992	+				-1.0
3,092,992	+				+0.1
3,092,992	+				-0.8
3,092,993	-				-0.2
3,092,993	-				+1.7
3,092,993	-				-0.8
3,092,993	-				+0.5
3,092,993	-				+0.3
3,092,993	-				-1.0
3,092,993	-				+0.3
3,092,993	-				+1.2
3,092,993	-				+1.9
3,092,993	-				+1.7
3,092,993	-				-0.3
3,092,993	-				+0.3
3,093,001	+				-0.8
3,093,001	+				+0.2
3,093,001	+				+0.2
3,093,001	+				-0.4
3,093,002	-				+0.6
3,093,002	-				+0.4
3,093,002	-				-0.3
3,093,002	-				-1.7
3,093,002	-				-0.2
3,093,002	-				+1.6
3,093,002	-				-2.5
3,093,002	-				-0.1
3,093,051	+				-0.6
3,093,051	+				+0.4
3,093,059	-				+1.2
3,093,092	+				+0.0
3,093,092	+				-0.7
3,093,092	+				-0.3
3,093,093	-				-0.3
3,093,105	-				-1.3
3,093,105	-				-0.6
3,093,105	-				+0.0
3,093,343	+		AO353_13920	0.47	+0.9
3,093,343	+		AO353_13920	0.47	-0.6
3,093,343	+		AO353_13920	0.47	-2.0
3,093,344	-		AO353_13920	0.47	-1.7
3,093,344	-		AO353_13920	0.47	+1.0
3,093,344	-		AO353_13920	0.47	-2.2
3,093,344	-		AO353_13920	0.47	-1.0
3,093,430	+		AO353_13920	0.63	+1.2
3,093,431	-		AO353_13920	0.63	+0.9
3,093,633	+				+0.0
3,093,634	-				+2.2
3,093,707	-		AO353_13925	0.23	+0.0
3,093,786	-		AO353_13925	0.51	+0.8
3,093,858	-		AO353_13925	0.77	-1.3
3,093,858	-		AO353_13925	0.77	-0.4
3,093,858	-		AO353_13925	0.77	-2.0
3,093,923	+				-2.4
3,093,923	+				+0.6
3,093,923	+				+0.6
3,093,923	+				+0.3
3,093,923	+				-0.6
3,093,923	+				+0.8
3,093,924	-				+2.2
3,093,924	-				+1.3
3,093,924	-				-0.9
3,093,924	-				+0.4
3,093,924	-				-1.5
3,093,924	-				+0.6
3,093,924	-				+0.0
3,093,951	+				-1.1
3,093,951	+				+0.5
3,093,951	+				-0.4
3,093,951	+				-1.1
3,093,951	+				+0.2
3,093,952	-				+0.7
3,093,952	-				-1.4
3,093,960	+				+0.3
3,093,960	+				-1.5
3,093,961	-				-0.5
3,093,961	-				+0.3
3,094,035	+		AO353_13930	0.33	+0.9
3,094,035	+		AO353_13930	0.33	+0.8
3,094,035	+		AO353_13930	0.33	-0.8
3,094,035	+		AO353_13930	0.33	-1.0
3,094,036	-		AO353_13930	0.33	+1.0
3,094,036	-		AO353_13930	0.33	+0.6
3,094,036	-		AO353_13930	0.33	-0.1
3,094,036	-		AO353_13930	0.33	-0.2
3,094,036	-		AO353_13930	0.33	+0.4
3,094,036	-		AO353_13930	0.33	+0.7
3,094,036	-		AO353_13930	0.33	-0.2
3,094,036	-		AO353_13930	0.33	+1.2
3,094,036	-		AO353_13930	0.33	-0.4
3,094,036	-		AO353_13930	0.33	+0.5
3,094,182	+		AO353_13930	0.85	-1.9
3,094,182	+				+1.2
3,094,182	+		AO353_13930	0.85	+0.0
3,094,182	+		AO353_13930	0.85	+1.3
3,094,183	-		AO353_13930	0.86	+1.2
3,094,183	-		AO353_13930	0.86	+1.2
3,094,183	-		AO353_13930	0.86	+0.6
3,094,183	-		AO353_13930	0.86	-0.8
3,094,183	-		AO353_13930	0.86	+0.6
3,094,183	-		AO353_13930	0.86	+0.3
3,094,241	+				+0.4
3,094,241	+				+0.1
3,094,253	+				-1.4
3,094,254	-				+0.6
3,094,260	+				+0.5
3,094,260	+				-0.3
3,094,260	+				+0.9
3,094,260	+				+0.5
3,094,260	+				-0.9
3,094,260	+				+1.6
3,094,260	+				-1.0
3,094,260	+				-0.4
3,094,260	+				-0.5
3,094,261	-				+2.0
3,094,261	-				+0.4
3,094,261	-				-1.1
3,094,261	-				-1.5
3,094,261	-				-0.8
3,094,261	-				+0.1
3,094,261	-				-1.5
3,094,261	-				-1.2
3,094,261	-				-0.2
3,094,261	-				-2.1
3,094,261	-				-1.1
3,094,264	+				-1.8
3,094,264	+				-1.9
3,094,264	+				+0.9
3,094,264	+				-0.5
3,094,264	+				-1.4
3,094,264	+				+3.0
3,094,264	+				+0.2
3,094,264	+				-0.4
3,094,264	+				+0.1
3,094,264	+				-1.0
3,094,264	+				+0.2
3,094,264	+				-0.1
3,094,264	+				-1.5
3,094,264	+				+1.3
3,094,264	+				-0.5
3,094,264	+				-0.7
3,094,264	+				-0.5
3,094,264	+				+0.9
3,094,264	+				+1.2
3,094,264	+				-1.9
3,094,264	+				-1.4
3,094,264	+				-0.4
3,094,264	+				-0.3
3,094,264	+				+0.3
3,094,264	+				+0.0
3,094,264	+				+2.9
3,094,264	+				+1.2
3,094,264	+				+0.5
3,094,264	+				-0.4
3,094,264	+				-1.1
3,094,264	+				+0.5
3,094,265	-				+1.5
3,094,265	-				+1.0
3,094,265	-				+1.0
3,094,265	-				-0.4
3,094,265	-				+0.5
3,094,265	-				+0.5
3,094,265	-				+0.9
3,094,265	-				-1.1
3,094,265	-				-0.6
3,094,265	-				+1.0
3,094,265	-				+2.2
3,094,265	-				-0.5
3,094,265	-				-0.3
3,094,265	-				-0.8
3,094,265	-				-0.1
3,094,265	-				+0.2
3,094,265	-				+0.5
3,094,265	-				+0.5
3,094,265	-				+1.2
3,094,265	-				-1.1
3,094,265	-				-0.7
3,094,265	-				-1.9
3,094,265	-				-0.8
3,094,265	-				-0.6
3,094,265	-				-1.0
3,094,265	-				+2.0
3,094,265	-				-0.7
3,094,268	+				+0.2
3,094,269	-				+0.0
3,094,269	-				-0.1
3,094,269	-				+0.4
3,094,269	-				-0.0
3,094,269	-				+0.5
3,094,285	+				+0.8
3,094,285	+				-0.1
3,094,286	-				+0.4
3,094,286	-				+0.2
3,094,286	-				+1.0
3,094,338	+				-0.3
3,094,339	-				-0.4
3,094,339	-				-0.4
3,094,743	+		AO353_13935	0.36	-0.1
3,094,743	+		AO353_13935	0.36	-1.8
3,094,743	+		AO353_13935	0.36	+0.9
3,094,743	+		AO353_13935	0.36	-0.3
3,094,743	+		AO353_13935	0.36	+0.1
3,094,743	+		AO353_13935	0.36	+0.8
3,094,744	-		AO353_13935	0.36	-0.4
3,094,744	-		AO353_13935	0.36	-0.1
3,094,744	-		AO353_13935	0.36	-0.6
3,094,744	-		AO353_13935	0.36	+1.3
3,094,744	-		AO353_13935	0.36	-0.1
3,094,744	-		AO353_13935	0.36	-0.8
3,094,744	-		AO353_13935	0.36	+1.5
3,094,744	-		AO353_13935	0.36	+0.2
3,094,744	-		AO353_13935	0.36	+0.2
3,094,744	-		AO353_13935	0.36	-0.1
3,094,830	+		AO353_13935	0.43	-0.4
3,094,830	+		AO353_13935	0.43	+0.4
3,094,864	-		AO353_13935	0.45	-0.1