Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12720

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,796,226	+				+2.3
2,796,242	+				-0.7
2,796,243	-				+0.9
2,796,243	-				-0.8
2,796,288	+				-1.4
2,796,288	+				+0.5
2,796,288	+				-1.8
2,796,288	+				-1.5
2,796,288	+				-0.7
2,796,288	+				+1.4
2,796,289	-				-1.4
2,796,289	-				-1.2
2,796,289	-				+0.3
2,796,289	-				-0.1
2,796,289	-				-1.2
2,796,289	-				+1.0
2,796,430	+				-0.3
2,796,430	+				-0.3
2,796,430	+				-0.5
2,796,430	+				+1.0
2,796,430	+				+1.0
2,796,431	-				+0.4
2,796,431	-				+1.4
2,796,431	-				-0.4
2,796,431	-				-0.6
2,796,431	-				-0.1
2,796,431	-				+0.4
2,796,431	-				+0.4
2,796,431	-				+0.4
2,796,431	-				-1.0
2,796,431	-				+2.3
2,796,434	+				+0.3
2,796,434	+				-0.9
2,796,434	+				-0.5
2,796,434	+				-0.0
2,796,434	+				-1.6
2,796,434	+				-1.8
2,796,434	+				-0.7
2,796,434	+				+0.9
2,796,434	+				-0.8
2,796,434	+				+0.2
2,796,434	+				+0.3
2,796,434	+				-0.2
2,796,434	+				-0.8
2,796,434	+				-1.2
2,796,434	+				+1.5
2,796,435	-				+0.3
2,796,435	-				-1.1
2,796,435	-				+0.3
2,796,435	-				-1.2
2,796,435	-				-0.3
2,796,435	-				-0.7
2,796,435	-				+0.3
2,796,435	-				-1.0
2,796,435	-				-1.6
2,796,435	-				-0.1
2,796,435	-				-0.7
2,796,435	-				-0.7
2,796,435	-				-1.2
2,796,435	-				-1.3
2,796,435	-				+0.8
2,796,435	-				+0.0
2,796,435	-				+0.5
2,796,435	-				-0.5
2,796,438	+				+0.5
2,796,439	-				+0.9
2,796,439	-				+1.0
2,796,439	-				-1.0
2,796,439	-				-0.0
2,796,439	-				+2.3
2,796,468	-				+1.0
2,796,828	+				+1.6
2,796,828	+				-0.3
2,796,829	-				-0.8
2,796,829	-				-0.3
2,796,829	-				+1.3
2,796,829	-				+0.3
2,796,862	+				-1.2
2,796,862	+				-0.1
2,796,862	+				-0.1
2,796,862	+				-1.5
2,796,862	+				+0.3
2,796,863	-				-0.4
2,796,916	-				-0.4
2,796,916	-				+0.3
2,796,976	+				-0.4
2,797,086	-		AO353_12720	0.13	+1.2
2,797,121	-		AO353_12720	0.25	+0.7
2,797,165	+		AO353_12720	0.41	-0.1
2,797,165	+		AO353_12720	0.41	+1.7
2,797,165	+		AO353_12720	0.41	+3.0
2,797,166	-		AO353_12720	0.41	+0.5
2,797,166	-		AO353_12720	0.41	-1.8
2,797,166	-		AO353_12720	0.41	+0.7
2,797,259	+		AO353_12720	0.73	+0.3
2,797,260	-		AO353_12720	0.73	+1.1
2,797,260	-		AO353_12720	0.73	-1.1
2,797,270	+		AO353_12720	0.77	+2.3
2,797,336	-				+0.9
2,797,358	-				+1.1
2,797,358	-				-2.3
2,797,360	-				+0.4
2,797,360	-				-0.9
2,797,374	+				-1.1
2,797,494	+				+0.3
2,797,495	-				+0.0
2,797,500	+				+0.6
2,797,576	-				-0.5
2,797,698	+				-0.4
2,797,698	+				-0.5
2,797,698	+				-0.9
2,797,698	+				-0.4
2,797,791	+				+1.1
2,797,791	+				+0.4
2,797,791	+				+0.5
2,797,803	-				+1.1
2,797,867	+				+0.1
2,797,868	-				-0.4
2,797,921	+				-0.7
2,797,922	-				+0.3
2,797,959	+				+0.7
2,798,060	-				+1.8
2,798,060	-				+1.3
2,798,073	-				-0.0
2,798,214	-		AO353_12725	0.18	+0.5
2,798,214	-		AO353_12725	0.18	-1.6
2,798,215	+		AO353_12725	0.18	+0.5
2,798,216	-		AO353_12725	0.18	+0.4
2,798,216	-		AO353_12725	0.18	-0.3
2,798,216	-		AO353_12725	0.18	-0.1
2,798,217	+		AO353_12725	0.18	-0.4
2,798,217	+		AO353_12725	0.18	-0.5
2,798,250	-		AO353_12725	0.23	+0.1
2,798,258	+		AO353_12725	0.24	-0.3
2,798,259	-		AO353_12725	0.24	-1.3
2,798,259	-		AO353_12725	0.24	-1.0
2,798,267	-		AO353_12725	0.25	-0.5
2,798,272	+		AO353_12725	0.25	+2.1
2,798,313	+		AO353_12725	0.31	+0.9
2,798,313	+		AO353_12725	0.31	+1.1
2,798,313	+		AO353_12725	0.31	+0.7
2,798,313	+		AO353_12725	0.31	+0.5
2,798,314	-				-0.3
2,798,314	-		AO353_12725	0.31	+1.8
2,798,314	-		AO353_12725	0.31	-0.2
2,798,314	-		AO353_12725	0.31	-1.7
2,798,323	-		AO353_12725	0.32	-0.1
2,798,323	-		AO353_12725	0.32	-1.5
2,798,323	-		AO353_12725	0.32	-1.2