Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12510

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,751,788	-		AO353_12505	0.42	-0.9
2,752,370	+				+1.4
2,752,370	+				-0.7
2,752,370	+				+2.8
2,752,370	+				+2.5
2,752,370	+				-0.9
2,752,370	+				+4.5
2,752,371	-				-0.0
2,752,371	-				-1.0
2,752,371	-				+1.3
2,752,413	+				-1.8
2,752,413	+				-0.3
2,752,413	+				-0.5
2,752,413	+				-0.8
2,752,413	+				-0.7
2,752,414	-				+1.2
2,752,414	-				-0.9
2,752,414	-				-1.6
2,752,420	+				-1.8
2,752,421	-				+0.4
2,752,423	+				-1.3
2,752,423	+				-0.8
2,752,423	+				-0.4
2,752,423	+				-2.0
2,752,423	+				-1.8
2,752,423	+				-1.5
2,752,423	+				-0.6
2,752,423	+				-1.4
2,752,423	+				-0.2
2,752,423	+				+0.6
2,752,423	+				-1.7
2,752,423	+				-1.8
2,752,423	+				-1.3
2,752,424	-				-0.7
2,752,424	-				+0.2
2,752,424	-				-0.8
2,752,424	-				-0.0
2,752,424	-				-1.0
2,752,438	+				-1.2
2,752,438	+				+1.9
2,752,438	+				+0.1
2,752,438	+				-2.0
2,752,438	+				-1.4
2,752,438	+				-0.4
2,752,439	-				-1.2
2,752,439	-				-0.6
2,752,439	-				-0.8
2,752,439	-				+0.5
2,752,439	-				-2.2
2,752,439	-				+3.3
2,752,439	-				-2.4
2,752,439	-				+0.5
2,752,472	+				+2.3
2,752,472	+				-0.0
2,752,473	-				-0.0
2,752,574	+				-0.8
2,752,574	+				-1.7
2,752,612	+		AO353_12510	0.11	-1.5
2,752,612	+		AO353_12510	0.11	-1.4
2,752,612	+		AO353_12510	0.11	-2.2
2,752,612	+		AO353_12510	0.11	-3.0
2,752,613	-		AO353_12510	0.11	-1.4
2,752,814	+		AO353_12510	0.24	-1.9
2,752,814	+		AO353_12510	0.24	+0.4
2,752,814	+		AO353_12510	0.24	+0.7
2,752,814	+		AO353_12510	0.24	+0.3
2,752,815	-		AO353_12510	0.24	+0.3
2,752,842	+		AO353_12510	0.26	-0.5
2,752,843	-		AO353_12510	0.26	+0.8
2,752,843	-		AO353_12510	0.26	-0.1
2,752,997	+		AO353_12510	0.35	-1.3
2,752,998	-		AO353_12510	0.35	-0.2
2,752,998	-		AO353_12510	0.35	-1.1
2,753,021	+		AO353_12510	0.37	-0.8
2,753,091	+		AO353_12510	0.41	-1.3
2,753,091	+		AO353_12510	0.41	-2.5
2,753,091	+		AO353_12510	0.41	-0.8
2,753,091	+		AO353_12510	0.41	-0.5
2,753,194	+		AO353_12510	0.48	+1.3
2,753,194	+		AO353_12510	0.48	-1.3
2,753,194	+		AO353_12510	0.48	-1.0
2,753,194	+		AO353_12510	0.48	+1.0
2,753,194	+		AO353_12510	0.48	+0.3
2,753,194	+		AO353_12510	0.48	-2.9
2,753,195	-		AO353_12510	0.48	-1.4
2,753,195	-		AO353_12510	0.48	-1.5
2,753,195	-		AO353_12510	0.48	-2.4
2,753,195	-		AO353_12510	0.48	+0.1
2,753,195	-		AO353_12510	0.48	-0.7
2,753,195	-		AO353_12510	0.48	-1.4
2,753,195	-		AO353_12510	0.48	-1.9
2,753,223	+		AO353_12510	0.49	-1.0
2,753,223	+		AO353_12510	0.49	+0.9
2,753,223	+		AO353_12510	0.49	-0.2
2,753,223	+		AO353_12510	0.49	-0.5
2,753,223	+		AO353_12510	0.49	-0.6
2,753,223	+		AO353_12510	0.49	-1.3
2,753,223	+		AO353_12510	0.49	-1.3
2,753,223	+		AO353_12510	0.49	-0.3
2,753,223	+		AO353_12510	0.49	-0.7
2,753,224	-		AO353_12510	0.49	-2.4
2,753,224	-		AO353_12510	0.49	-1.4
2,753,224	-		AO353_12510	0.49	-0.7
2,753,224	-		AO353_12510	0.49	-0.4
2,753,224	-		AO353_12510	0.49	+0.3
2,753,224	-		AO353_12510	0.49	-0.7
2,753,224	-		AO353_12510	0.49	-0.4
2,753,233	-		AO353_12510	0.50	-1.7
2,753,390	-		AO353_12510	0.60	+1.3
2,753,390	-		AO353_12510	0.60	-1.2
2,753,390	-		AO353_12510	0.60	-0.7
2,753,390	-		AO353_12510	0.60	+0.1
2,753,783	+		AO353_12510	0.84	-1.5
2,753,783	+		AO353_12510	0.84	-2.2
2,753,783	+		AO353_12510	0.84	-2.2
2,753,783	+		AO353_12510	0.84	-0.3
2,753,783	+		AO353_12510	0.84	-0.5
2,753,783	+		AO353_12510	0.84	+0.6
2,753,783	+		AO353_12510	0.84	-0.7
2,753,783	+		AO353_12510	0.84	-0.6
2,753,783	+		AO353_12510	0.84	-0.4
2,753,783	+		AO353_12510	0.84	+0.3
2,753,783	+		AO353_12510	0.84	-1.7
2,753,783	+		AO353_12510	0.84	+0.3
2,753,783	+		AO353_12510	0.84	-0.9
2,753,783	+		AO353_12510	0.84	+0.7
2,753,783	+		AO353_12510	0.84	-2.0
2,753,783	+		AO353_12510	0.84	-1.5
2,753,784	-		AO353_12510	0.84	-2.0
2,753,784	-		AO353_12510	0.84	-0.1
2,753,784	-		AO353_12510	0.84	-0.0
2,753,784	-		AO353_12510	0.84	-1.8
2,753,784	-		AO353_12510	0.84	-0.0
2,753,784	-		AO353_12510	0.84	-0.8
2,753,784	-		AO353_12510	0.84	-1.2
2,753,784	-		AO353_12510	0.84	-2.8
2,753,784	-		AO353_12510	0.84	-2.2
2,753,784	-		AO353_12510	0.84	-0.2
2,753,784	-		AO353_12510	0.84	-0.1
2,753,784	-		AO353_12510	0.84	+0.3
2,753,784	-		AO353_12510	0.84	-0.4
2,753,784	-		AO353_12510	0.84	-0.9
2,753,784	-		AO353_12510	0.84	-1.0
2,753,784	-		AO353_12510	0.84	-1.2
2,753,784	-		AO353_12510	0.84	-2.3
2,753,784	-		AO353_12510	0.84	-0.9
2,753,784	-		AO353_12510	0.84	-0.2
2,753,784	-		AO353_12510	0.84	-3.4
2,753,861	+		AO353_12510	0.89	-1.2
2,753,861	+		AO353_12510	0.89	+0.9
2,753,861	+		AO353_12510	0.89	-2.0
2,753,861	+		AO353_12510	0.89	-1.4
2,753,862	-		AO353_12510	0.89	-0.0
2,753,862	-		AO353_12510	0.89	+0.1
2,753,862	-		AO353_12510	0.89	-2.4
2,753,894	+				-0.3
2,753,894	+				-0.0
2,753,894	+				-1.3
2,753,894	+				-0.2
2,753,894	+				-2.8
2,753,895	-				-0.2
2,753,895	-				-2.0
2,753,895	-				-2.3
2,753,895	-				-1.9
2,753,906	+				-2.2
2,753,906	+				+1.3
2,753,906	+				-1.4
2,753,906	+				-0.7
2,753,906	+				-1.2
2,753,907	-				-1.2
2,753,907	-				+0.6
2,753,907	-				-0.7
2,753,907	-				-1.1
2,753,907	-				+0.3
2,753,912	-				-0.1
2,753,978	-				+0.7
2,754,137	+				-1.2
2,754,137	+				+0.4
2,754,180	-				+0.6
2,754,269	+				+0.7
2,754,269	+				-0.8
2,754,269	+				-0.4
2,754,269	+				-0.4
2,754,269	+				+2.3
2,754,270	-				-1.2
2,754,270	-				+0.5
2,754,270	-				+0.0
2,754,270	-				-0.5
2,754,270	-				+0.1
2,754,270	-				+0.3
2,754,270	-				+0.4
2,754,305	+				-0.2
2,754,305	+				+0.1
2,754,306	-				-1.1
2,754,324	-				-0.7
2,754,384	-				+1.2
2,754,399	+				-0.6
2,754,399	+				+1.3
2,754,400	-				+0.5
2,754,400	-				-0.1
2,754,422	+				+0.8
2,754,422	+				+0.6
2,754,423	-				-1.2
2,754,423	-				-1.2
2,754,442	+				-0.7
2,754,443	-				-0.1
2,754,450	-				-1.3
2,754,450	-				+1.5
2,754,470	+				-1.2
2,754,470	+				-1.7
2,754,471	-				-0.5
2,754,471	-				-0.7
2,754,471	-				-0.9
2,754,617	+				+0.0
2,754,636	+				-0.2
2,754,637	-				+1.0
2,754,637	-				-0.5
2,754,637	-				-0.0
2,754,648	-				-2.6
2,754,648	-				-1.8
2,754,915	+		AO353_12515	0.12	-0.0
2,754,915	+		AO353_12515	0.12	+0.7
2,754,915	+		AO353_12515	0.12	+0.8
2,754,915	+		AO353_12515	0.12	+0.8
2,754,916	-		AO353_12515	0.12	-0.4
2,754,916	-		AO353_12515	0.12	-1.4
2,754,916	-		AO353_12515	0.12	+0.7
2,754,916	-		AO353_12515	0.12	+0.1
2,754,916	-		AO353_12515	0.12	-0.9
2,754,916	-		AO353_12515	0.12	-0.7
2,754,916	-		AO353_12515	0.12	+0.9
2,754,948	+		AO353_12515	0.13	+0.2
2,754,948	+		AO353_12515	0.13	-0.0
2,754,948	+		AO353_12515	0.13	+0.7
2,754,948	+		AO353_12515	0.13	-0.3
2,754,949	-		AO353_12515	0.13	+0.2
2,754,987	+		AO353_12515	0.14	-0.1
2,754,988	-		AO353_12515	0.14	-0.7
2,754,988	-		AO353_12515	0.14	-0.5