Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12105

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,658,210	-				-0.6
2,658,215	+				+0.4
2,658,215	+				-0.7
2,658,215	+				-0.5
2,658,265	+				-0.8
2,658,312	+				+0.2
2,658,312	+				-1.3
2,658,313	-				+1.3
2,658,313	-				-0.3
2,658,389	+				+1.3
2,658,583	+		AO353_12100	0.26	+0.6
2,658,583	+		AO353_12100	0.26	+0.7
2,658,583	+		AO353_12100	0.26	-0.1
2,658,583	+		AO353_12100	0.26	+0.3
2,658,583	+		AO353_12100	0.26	-1.5
2,658,583	+		AO353_12100	0.26	+0.7
2,658,583	+		AO353_12100	0.26	+0.7
2,658,583	+		AO353_12100	0.26	+0.5
2,658,584	-		AO353_12100	0.26	+0.4
2,658,697	-		AO353_12100	0.40	+0.5
2,658,706	+		AO353_12100	0.42	+0.6
2,658,706	+		AO353_12100	0.42	-0.3
2,658,706	+		AO353_12100	0.42	-0.9
2,658,706	+		AO353_12100	0.42	-1.3
2,658,707	-		AO353_12100	0.42	-1.3
2,658,707	-		AO353_12100	0.42	-1.3
2,658,707	-		AO353_12100	0.42	-1.0
2,658,707	-		AO353_12100	0.42	+1.0
2,658,807	+		AO353_12100	0.54	-0.8
2,658,807	+		AO353_12100	0.54	+1.9
2,658,808	-		AO353_12100	0.55	+0.5
2,658,809	+		AO353_12100	0.55	-1.0
2,658,809	+		AO353_12100	0.55	+0.3
2,658,809	+		AO353_12100	0.55	+0.2
2,658,809	+		AO353_12100	0.55	+1.3
2,658,809	+		AO353_12100	0.55	-0.6
2,658,809	+		AO353_12100	0.55	-1.0
2,658,810	-		AO353_12100	0.55	+0.2
2,658,810	-		AO353_12100	0.55	+0.5
2,658,916	+		AO353_12100	0.68	-1.1
2,658,916	+		AO353_12100	0.68	-1.6
2,658,916	+		AO353_12100	0.68	-1.7
2,658,916	+		AO353_12100	0.68	-1.9
2,658,917	-		AO353_12100	0.69	-0.5
2,658,917	-		AO353_12100	0.69	-0.4
2,659,071	-		AO353_12100	0.88	-0.7
2,659,071	-		AO353_12100	0.88	-1.1
2,659,329	+		AO353_12105	0.13	+0.3
2,659,329	+		AO353_12105	0.13	-1.4
2,659,329	+		AO353_12105	0.13	-0.8
2,659,329	+		AO353_12105	0.13	-0.7
2,659,329	+		AO353_12105	0.13	-2.1
2,659,330	-		AO353_12105	0.13	-2.1
2,659,330	-		AO353_12105	0.13	-1.3
2,659,330	-		AO353_12105	0.13	-2.2
2,659,425	+		AO353_12105	0.20	-0.8
2,659,425	+		AO353_12105	0.20	-2.5
2,659,426	-		AO353_12105	0.20	+0.2
2,659,426	-		AO353_12105	0.20	+0.7
2,659,426	-		AO353_12105	0.20	-1.0
2,659,426	-		AO353_12105	0.20	-1.3
2,659,671	+		AO353_12105	0.38	-1.4
2,659,671	+		AO353_12105	0.38	-0.8
2,659,671	+		AO353_12105	0.38	-0.7
2,659,672	-		AO353_12105	0.39	+1.5
2,659,672	-		AO353_12105	0.39	-1.8
2,659,857	+		AO353_12105	0.53	-0.3
2,659,857	+		AO353_12105	0.53	+1.1
2,659,857	+		AO353_12105	0.53	-1.8
2,659,858	-		AO353_12105	0.53	-1.3
2,659,858	-		AO353_12105	0.53	-0.7
2,659,858	-		AO353_12105	0.53	-2.3
2,659,858	-		AO353_12105	0.53	-1.4
2,659,864	-		AO353_12105	0.53	-0.8
2,660,292	+		AO353_12105	0.86	-1.1
2,660,292	+		AO353_12105	0.86	-3.4
2,660,292	+		AO353_12105	0.86	-1.5
2,660,292	+		AO353_12105	0.86	-1.0
2,660,292	+		AO353_12105	0.86	-0.8
2,660,292	+		AO353_12105	0.86	-1.4
2,660,292	+		AO353_12105	0.86	-0.7
2,660,292	+		AO353_12105	0.86	+0.3
2,660,293	-		AO353_12105	0.86	-1.5
2,660,293	-		AO353_12105	0.86	-1.3
2,660,293	-		AO353_12105	0.86	-1.5
2,660,497	+				-0.7
2,660,497	+				-1.1
2,660,497	+				-0.9
2,660,497	+				+0.7
2,660,497	+				-1.0
2,660,497	+				-2.1
2,660,497	+				-1.0
2,660,497	+				-1.0
2,660,498	-				-1.7
2,660,498	-				-0.9
2,660,498	-				+0.5
2,660,498	-				-0.3
2,660,502	+				-0.6
2,660,502	+				-0.5
2,660,502	+				+1.3
2,660,502	+				-0.7
2,660,502	+				-1.8
2,660,502	+				-2.2
2,660,502	+				-2.3
2,660,502	+				+0.0
2,660,502	+				-1.8
2,660,503	-				-0.8
2,660,503	-				+1.5
2,660,503	-				-0.7
2,660,503	-				+0.3
2,660,503	-				+0.7
2,660,503	-				-0.8
2,660,503	-				+1.4
2,660,503	-				-2.1
2,660,503	-				-0.3
2,660,503	-				-2.2
2,660,503	-				-2.5
2,660,519	-				-1.0
2,660,573	+				-2.1
2,660,574	-				-0.5
2,660,581	+				-1.6
2,660,581	+				+0.0
2,660,581	+				+0.0
2,660,581	+				-1.0
2,660,581	+				+0.0
2,660,582	-				-0.7
2,660,582	-				+0.0
2,660,582	-				+2.7
2,660,582	-				+1.3
2,660,582	-				+0.8
2,660,582	-				+0.3
2,660,582	-				+0.3
2,660,663	+		AO353_12110	0.11	-0.3
2,660,663	+		AO353_12110	0.11	+0.7
2,660,663	+		AO353_12110	0.11	-2.5
2,660,664	-		AO353_12110	0.11	-1.4
2,660,686	+		AO353_12110	0.13	-1.8
2,660,687	-		AO353_12110	0.13	-3.2
2,660,687	-		AO353_12110	0.13	-2.3
2,660,775	+		AO353_12110	0.20	-3.2
2,660,776	-		AO353_12110	0.20	+0.7
2,660,997	-		AO353_12110	0.37	+0.0
2,661,027	+		AO353_12110	0.39	-1.9
2,661,027	+		AO353_12110	0.39	-0.3
2,661,028	-		AO353_12110	0.39	-1.3
2,661,028	-		AO353_12110	0.39	-1.6
2,661,129	+		AO353_12110	0.47	+1.3
2,661,130	-		AO353_12110	0.47	+0.4
2,661,135	-		AO353_12110	0.48	-0.8
2,661,135	-		AO353_12110	0.48	+0.0
2,661,385	+		AO353_12110	0.67	+0.0
2,661,385	+		AO353_12110	0.67	+1.0
2,661,385	+		AO353_12110	0.67	-1.0
2,661,385	+		AO353_12110	0.67	-0.3
2,661,386	-		AO353_12110	0.67	-0.7
2,661,386	-		AO353_12110	0.67	+1.6
2,661,391	+		AO353_12110	0.67	-0.3
2,661,391	+		AO353_12110	0.67	-0.7
2,661,391	+		AO353_12110	0.67	-2.6
2,661,391	+		AO353_12110	0.67	-2.6
2,661,392	-		AO353_12110	0.68	-0.3
2,661,392	-		AO353_12110	0.68	-2.5
2,661,392	-		AO353_12110	0.68	+0.5
2,661,394	+		AO353_12110	0.68	-2.1
2,661,394	+		AO353_12110	0.68	-0.8
2,661,394	+		AO353_12110	0.68	-2.4
2,661,394	+		AO353_12110	0.68	+0.1
2,661,394	+		AO353_12110	0.68	-0.7
2,661,394	+		AO353_12110	0.68	-1.1
2,661,394	+		AO353_12110	0.68	-1.7
2,661,394	+		AO353_12110	0.68	-2.6
2,661,394	+		AO353_12110	0.68	+0.0
2,661,394	+		AO353_12110	0.68	-0.6
2,661,394	+		AO353_12110	0.68	-2.3
2,661,394	+		AO353_12110	0.68	-0.7
2,661,394	+		AO353_12110	0.68	-0.3
2,661,394	+		AO353_12110	0.68	-0.5
2,661,395	-		AO353_12110	0.68	+0.3
2,661,395	-		AO353_12110	0.68	+3.1
2,661,395	-		AO353_12110	0.68	-2.2
2,661,395	-		AO353_12110	0.68	-2.6
2,661,395	-		AO353_12110	0.68	+0.7
2,661,395	-		AO353_12110	0.68	-2.1
2,661,451	+		AO353_12110	0.72	-1.4
2,661,451	+		AO353_12110	0.72	-0.8
2,661,452	-		AO353_12110	0.72	-1.3