Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12060

Experiment: Rifampicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.005 mg/ml
2,650,894	+		AO353_12055	0.64	-0.2
2,650,894	+		AO353_12055	0.64	+0.3
2,650,895	-		AO353_12055	0.64	-1.8
2,650,895	-		AO353_12055	0.64	-0.4
2,650,895	-		AO353_12055	0.64	-0.3
2,651,019	+		AO353_12055	0.70	+0.0
2,651,019	+		AO353_12055	0.70	-0.9
2,651,020	-		AO353_12055	0.70	-0.6
2,651,020	-		AO353_12055	0.70	-0.2
2,651,146	+		AO353_12055	0.75	-0.8
2,651,146	+		AO353_12055	0.75	-0.7
2,651,146	+		AO353_12055	0.75	-0.3
2,651,146	+		AO353_12055	0.75	-1.1
2,651,146	+		AO353_12055	0.75	-0.1
2,651,147	-		AO353_12055	0.75	+0.0
2,651,147	-		AO353_12055	0.75	-1.1
2,651,147	-		AO353_12055	0.75	+0.0
2,651,147	-		AO353_12055	0.75	+0.2
2,651,147	-		AO353_12055	0.75	+0.6
2,651,227	-		AO353_12055	0.79	-0.5
2,651,315	+		AO353_12055	0.83	-1.8
2,651,590	+				-1.0
2,651,590	+				-0.2
2,651,591	-				-1.5
2,651,591	-				+0.2
2,651,591	-				-1.8
2,651,591	-				+0.2
2,651,591	-				-2.4
2,651,661	+				+0.4
2,651,661	+				-1.1
2,651,661	+				+1.5
2,651,661	+				+0.3
2,651,661	+				-0.3
2,651,662	-				-1.2
2,651,662	-				-1.7
2,651,662	-				-0.8
2,651,707	+				+0.3
2,651,707	+				+0.6
2,651,707	+				-1.9
2,651,707	+				+0.0
2,651,708	-				-0.3
2,651,708	-				+0.9
2,651,708	-				-0.1
2,651,738	+				-1.3
2,651,738	+				-1.6
2,651,738	+				+0.8
2,651,738	+				+0.0
2,651,738	+				+1.7
2,651,738	+				-0.4
2,651,738	+				+0.2
2,651,739	-				+1.7
2,651,739	-				+0.6
2,651,739	-				+0.5
2,651,739	-				+1.9
2,651,739	-				+1.6
2,651,739	-				+2.5
2,651,739	-				+1.6
2,651,739	-				+1.5
2,651,740	+				-0.4
2,651,741	-				+1.2
2,651,777	+				+0.6
2,651,777	+				+2.3
2,651,777	+				-0.8
2,651,778	-				+0.8
2,651,954	-		AO353_12060	0.45	+0.9
2,651,954	-		AO353_12060	0.45	+2.3
2,652,107	+		AO353_12060	0.83	+0.5
2,652,107	+		AO353_12060	0.83	+1.7
2,652,107	+		AO353_12060	0.83	+2.3
2,652,107	+		AO353_12060	0.83	+1.4
2,652,108	-		AO353_12060	0.83	+1.1
2,652,108	-		AO353_12060	0.83	-0.3
2,652,108	-		AO353_12060	0.83	+1.3
2,652,108	-		AO353_12060	0.83	+1.7
2,652,108	-		AO353_12060	0.83	+1.4
2,652,108	-		AO353_12060	0.83	+2.0
2,652,108	-		AO353_12060	0.83	+0.6
2,652,108	-		AO353_12060	0.83	+1.9
2,652,138	-				+1.8
2,652,138	-				+1.5
2,652,138	-				+1.6
2,652,174	+				+1.9
2,652,174	+				-0.8
2,652,174	+				+0.4
2,652,174	+				-1.1
2,652,175	-				+0.3
2,652,206	+				-0.4
2,652,207	-				-0.5
2,652,233	+				-0.6
2,652,234	-				+2.7
2,652,303	+				-1.4
2,652,359	+				-1.8
2,652,360	-				-2.7
2,652,360	-				+1.2
2,652,360	-				+1.4
2,652,423	+				+1.3
2,652,423	+				-2.6
2,652,423	+				+0.6
2,652,423	+				+0.3
2,652,423	+				+1.2
2,652,423	+				-1.1
2,652,424	-				+2.6
2,652,424	-				+2.1
2,652,424	-				+0.7
2,652,424	-				+1.5
2,652,426	+				-0.3
2,652,426	+				+1.3
2,652,426	+				+0.0
2,652,426	+				-0.1
2,652,426	+				-1.6
2,652,426	+				+0.0
2,652,426	+				+2.0
2,652,427	-				+0.7
2,652,427	-				+2.1
2,652,427	-				+2.0
2,652,427	-				+0.8
2,652,427	-				-0.9
2,652,427	-				-0.5
2,652,427	-				+1.3
2,652,427	-				-0.2
2,652,427	-				+1.9
2,652,427	-				-0.1
2,652,429	+				+0.2
2,652,429	+				+2.5
2,652,429	+				-2.0
2,652,429	+				-0.6
2,652,429	+				+0.3
2,652,429	+				-1.1
2,652,429	+				+2.3
2,652,429	+				-0.8
2,652,429	+				-0.3
2,652,429	+				-0.3
2,652,430	-				-1.0
2,652,430	-				-0.6
2,652,430	-				+0.3
2,652,430	-				+0.8
2,652,430	-				+0.4
2,652,430	-				+0.0
2,652,430	-				-0.7
2,652,430	-				+0.5
2,652,430	-				+0.7
2,652,430	-				+0.6
2,652,430	-				+0.0
2,652,430	-				+0.3
2,652,430	-				+2.0
2,652,473	+				-0.7
2,652,473	+				-2.7
2,652,474	-				-0.2
2,652,474	-				+2.1
2,652,588	+				+1.0
2,652,589	-				-0.4
2,652,589	-				+0.7
2,652,729	+		AO353_12065	0.17	+0.7
2,652,729	+		AO353_12065	0.17	+0.6
2,652,729	+		AO353_12065	0.17	-1.3
2,652,729	+		AO353_12065	0.17	-1.7
2,652,729	+		AO353_12065	0.17	-0.1
2,652,730	-		AO353_12065	0.17	+0.5
2,652,730	-		AO353_12065	0.17	-0.5
2,652,730	-		AO353_12065	0.17	-0.6
2,652,730	-		AO353_12065	0.17	+0.9
2,652,730	-		AO353_12065	0.17	+0.5
2,652,730	-		AO353_12065	0.17	+1.3
2,652,730	-		AO353_12065	0.17	-0.3
2,652,730	-		AO353_12065	0.17	-0.4
2,652,730	-		AO353_12065	0.17	-0.6
2,652,730	-		AO353_12065	0.17	+0.0
2,652,730	-		AO353_12065	0.17	+0.3
2,652,803	+		AO353_12065	0.21	-0.6
2,652,803	+		AO353_12065	0.21	+0.6
2,652,803	+		AO353_12065	0.21	-0.5
2,652,803	+		AO353_12065	0.21	-0.8
2,652,803	+		AO353_12065	0.21	+0.0
2,652,803	+		AO353_12065	0.21	-1.0
2,652,804	-		AO353_12065	0.21	-1.1
2,652,804	-		AO353_12065	0.21	+0.7
2,652,804	-		AO353_12065	0.21	-1.0
2,652,804	-		AO353_12065	0.21	+0.2
2,652,804	-		AO353_12065	0.21	+0.7
2,652,804	-		AO353_12065	0.21	-0.8
2,652,867	+		AO353_12065	0.25	-2.3
2,652,867	+		AO353_12065	0.25	+1.7
2,652,867	+		AO353_12065	0.25	-0.4
2,652,867	+		AO353_12065	0.25	+1.2
2,652,867	+		AO353_12065	0.25	-1.4
2,652,867	+		AO353_12065	0.25	+0.5
2,652,867	+		AO353_12065	0.25	+0.1
2,652,867	+		AO353_12065	0.25	-1.9
2,652,867	+		AO353_12065	0.25	+0.2
2,652,867	+		AO353_12065	0.25	-1.1
2,652,867	+		AO353_12065	0.25	+0.1
2,652,867	+		AO353_12065	0.25	-0.5
2,652,867	+		AO353_12065	0.25	-0.5
2,652,867	+		AO353_12065	0.25	+0.0
2,652,867	+		AO353_12065	0.25	+0.9
2,652,867	+		AO353_12065	0.25	+0.3
2,652,867	+		AO353_12065	0.25	-1.3
2,652,867	+		AO353_12065	0.25	-0.3
2,652,867	+		AO353_12065	0.25	-1.3
2,652,868	-		AO353_12065	0.25	-0.6
2,652,868	-		AO353_12065	0.25	+0.0
2,652,868	-		AO353_12065	0.25	+1.2
2,652,868	-		AO353_12065	0.25	-0.6
2,652,868	-		AO353_12065	0.25	-0.3
2,652,868	-		AO353_12065	0.25	-0.1
2,652,868	-		AO353_12065	0.25	-0.8
2,652,868	-		AO353_12065	0.25	+0.0
2,652,868	-		AO353_12065	0.25	+0.0
2,652,868	-		AO353_12065	0.25	-1.1
2,652,868	-		AO353_12065	0.25	+0.2
2,652,868	-		AO353_12065	0.25	+2.1
2,652,868	-		AO353_12065	0.25	+2.1
2,652,868	-		AO353_12065	0.25	+0.3
2,652,868	-		AO353_12065	0.25	-0.5
2,652,868	-		AO353_12065	0.25	+0.2
2,652,868	-		AO353_12065	0.25	+1.9
2,652,868	-		AO353_12065	0.25	+1.5
2,652,868	-		AO353_12065	0.25	+0.1
2,652,868	-		AO353_12065	0.25	-0.3
2,652,868	-		AO353_12065	0.25	+1.6
2,652,868	-		AO353_12065	0.25	+0.1
2,652,869	+		AO353_12065	0.25	+0.3
2,652,869	+		AO353_12065	0.25	+1.0
2,652,869	+		AO353_12065	0.25	+0.2
2,652,869	+		AO353_12065	0.25	+0.6
2,652,870	-		AO353_12065	0.25	-1.8
2,652,870	-		AO353_12065	0.25	+1.0
2,652,870	-		AO353_12065	0.25	+0.9
2,652,919	+		AO353_12065	0.28	-1.8
2,652,936	+		AO353_12065	0.29	-0.7
2,652,936	+		AO353_12065	0.29	+1.1
2,652,936	+		AO353_12065	0.29	+1.0
2,652,936	+		AO353_12065	0.29	-0.4
2,652,936	+		AO353_12065	0.29	+0.0
2,652,936	+		AO353_12065	0.29	+0.7
2,652,937	-		AO353_12065	0.29	+0.0
2,652,937	-		AO353_12065	0.29	+2.2
2,652,937	-		AO353_12065	0.29	+0.4
2,652,937	-		AO353_12065	0.29	-0.1
2,652,937	-		AO353_12065	0.29	+0.4
2,652,937	-		AO353_12065	0.29	-1.5
2,652,938	+		AO353_12065	0.30	-1.4
2,652,938	+		AO353_12065	0.30	-0.8
2,652,938	+		AO353_12065	0.30	-2.5
2,652,938	+		AO353_12065	0.30	+0.4
2,652,938	+		AO353_12065	0.30	-1.0
2,652,938	+		AO353_12065	0.30	-0.5
2,652,938	+		AO353_12065	0.30	-0.4
2,652,938	+		AO353_12065	0.30	-1.0
2,652,938	+		AO353_12065	0.30	+0.1
2,652,938	+		AO353_12065	0.30	-0.8
2,652,938	+		AO353_12065	0.30	-1.6
2,652,938	+		AO353_12065	0.30	+0.3
2,652,938	+		AO353_12065	0.30	+0.2
2,652,938	+		AO353_12065	0.30	-2.8
2,652,938	+		AO353_12065	0.30	+0.1
2,652,938	+		AO353_12065	0.30	-1.5
2,652,938	+		AO353_12065	0.30	+0.7
2,652,939	-		AO353_12065	0.30	+1.0
2,652,939	-		AO353_12065	0.30	-0.0
2,652,939	-		AO353_12065	0.30	+0.0
2,652,939	-		AO353_12065	0.30	+1.1
2,652,939	-		AO353_12065	0.30	-1.0
2,652,939	-		AO353_12065	0.30	-0.3
2,653,125	+		AO353_12065	0.41	+0.8
2,653,125	+		AO353_12065	0.41	-0.3
2,653,125	+		AO353_12065	0.41	-2.6
2,653,125	+		AO353_12065	0.41	+0.0
2,653,126	-		AO353_12065	0.41	-1.6
2,653,126	-		AO353_12065	0.41	+1.7
2,653,158	+		AO353_12065	0.43	-0.9
2,653,159	-		AO353_12065	0.43	+1.3